Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 4.2e-92 341.3 166 100.0
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 2.2e-56 222.6 161 72.7
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 3.2e-47 192.2 172 59.3
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 2.1e-46 189.5 177 58.2
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 1.5e-44 183.3 139 66.2
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 1.5e-44 183.3 169 58.0
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 1.9e-44 183.0 143 65.0
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 1.9e-44 183.0 165 59.4
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 2.5e-44 182.6 143 65.0
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 9.6e-44 180.6 164 59.8
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 9.6e-44 180.6 139 66.2
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 2.8e-43 179.1 146 63.0
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 2.8e-43 179.1 146 63.0
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 3.6e-43 178.7 151 61.6
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 3.6e-43 178.7 142 65.5
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 4.8e-43 178.3 146 62.3
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 4.8e-43 178.3 146 62.3
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 4.8e-43 178.3 146 62.3
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 4.8e-43 178.3 146 62.3
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 4.8e-43 178.3 164 59.1
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 4.8e-43 178.3 145 62.1
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 6.2e-43 177.9 145 62.8
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 6.2e-43 177.9 145 62.8
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 8.1e-43 177.6 142 62.0
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 8.1e-43 177.6 119 73.9
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 1.1e-42 177.2 167 56.3
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 1.1e-42 177.2 158 57.6
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 1.1e-42 177.2 146 61.6
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 1.1e-42 177.2 146 62.3
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 1.1e-42 177.2 146 61.6
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 1.4e-42 176.8 139 65.5
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 1.4e-42 176.8 142 64.8
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 1.4e-42 176.8 164 59.1
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 1.4e-42 176.8 146 61.6
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 1.8e-42 176.4 139 64.7
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 1.8e-42 176.4 139 64.7
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 2.4e-42 176.0 122 73.0
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 2.4e-42 176.0 142 63.4
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 2.4e-42 176.0 142 63.4
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 2.4e-42 176.0 139 65.5
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 2.4e-42 176.0 170 57.6
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 3.1e-42 175.6 136 63.2
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 3.1e-42 175.6 136 63.2
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 3.1e-42 175.6 136 63.2
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 3.1e-42 175.6 149 61.1
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 3.1e-42 175.6 122 72.1
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 4.0e-42 175.3 117 73.5
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 5.3e-42 174.9 139 65.5
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 5.3e-42 174.9 139 65.5
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 5.3e-42 174.9 142 62.0
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 5.3e-42 174.9 168 57.1
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 5.3e-42 174.9 136 65.4
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 6.9e-42 174.5 163 58.3
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 6.9e-42 174.5 143 62.9
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 6.9e-42 174.5 122 73.0
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 6.9e-42 174.5 119 73.1
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 9.0e-42 174.1 155 59.4
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 9.0e-42 174.1 142 64.1
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 1.2e-41 173.7 139 63.3
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 1.2e-41 173.7 147 61.9
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 1.2e-41 173.7 139 64.7
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 1.2e-41 173.7 157 59.2
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 1.2e-41 173.7 142 62.7
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 1.5e-41 173.3 149 60.4
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 1.5e-41 173.3 150 58.7
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 2.0e-41 172.9 142 62.7
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 2.0e-41 172.9 142 63.4
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 2.0e-41 172.9 139 64.0
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 2.6e-41 172.6 147 61.2
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 2.6e-41 172.6 148 58.1
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 2.6e-41 172.6 153 61.4
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 2.6e-41 172.6 139 62.6
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 3.4e-41 172.2 146 63.0
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 3.4e-41 172.2 148 58.8
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 4.5e-41 171.8 146 61.0
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 4.5e-41 171.8 139 63.3
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 4.5e-41 171.8 148 58.8
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 4.5e-41 171.8 148 58.8
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 4.5e-41 171.8 142 59.2
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 4.5e-41 171.8 148 58.1
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 4.5e-41 171.8 122 70.5
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 4.5e-41 171.8 150 60.0
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 5.8e-41 171.4 139 62.6
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 5.8e-41 171.4 152 59.9
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 5.8e-41 171.4 157 58.0
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 7.6e-41 171.0 139 62.6
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 7.6e-41 171.0 157 56.1
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 7.6e-41 171.0 126 69.8
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 7.6e-41 171.0 126 69.8
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 7.6e-41 171.0 157 58.6
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 7.6e-41 171.0 157 58.6
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 9.9e-41 170.6 157 58.0
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 9.9e-41 170.6 149 59.1
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 1.3e-40 170.2 170 55.9
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 2.2e-40 169.5 152 58.6
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 2.2e-40 169.5 156 58.3
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 2.9e-40 169.1 145 59.3
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 2.9e-40 169.1 147 59.9
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 3.8e-40 168.7 145 58.6
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 3.2e-39 165.6 157 57.3
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 3.2e-39 165.6 157 57.3
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 4.2e-39 165.2 139 60.4
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 5.4e-39 164.9 149 59.1
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 7.1e-39 164.5 157 56.7
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 2.1e-38 162.9 119 66.4
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 2.1e-38 162.9 151 57.6
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 2.7e-38 162.5 151 57.6
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 7.9e-38 161.0 150 56.7
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 1.0e-37 160.6 119 66.4
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 1.0e-37 160.6 191 48.2
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 1.3e-37 160.2 151 56.3
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 1.9e-36 156.4 152 55.3
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 7.4e-36 154.5 109 70.6
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 1.3e-35 153.7 109 70.6
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.3e-35 153.7 109 70.6
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 8.1e-35 151.0 114 66.7
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 1.1e-34 150.6 107 69.2
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 3.1e-34 149.1 107 68.2
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 9.0e-34 147.5 139 57.6
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 1.0e-32 144.1 133 55.6
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 3.8e-32 142.1 114 64.0
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 2.5e-31 139.4 82 79.3
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 3.2e-31 139.0 228 38.6
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 4.2e-31 138.7 129 55.0
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 4.6e-30 135.2 89 73.0
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 2.8e-27 125.9 108 61.1
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 1.1e-26 124.0 255 33.7
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 1.8e-26 123.2 86 72.1
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 1.3e-24 117.1 115 53.0
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 2.2e-24 116.3 123 52.8
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 2.9e-24 115.9 76 71.1
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 5.0e-24 115.2 74 71.6
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 5.0e-24 115.2 120 53.3
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 6.5e-24 114.8 104 58.7
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 8.4e-24 114.4 107 57.0
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 4.2e-23 112.1 123 48.8
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 7.1e-23 111.3 107 55.1
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 4.5e-17 92.0 76 56.6
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 7.7e-17 91.3 107 49.5
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 7.7e-17 91.3 107 49.5
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 6.7e-13 78.2 91 42.9
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 4.3e-12 75.5 90 46.7
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 1.4e-10 70.5 54 57.4
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 3.4e-09 65.9 36 77.8
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 5.9e-09 65.1 46 54.3
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 7.7e-09 64.7 48 62.5
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 1.0e-08 64.3 84 48.8
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 7.9e-06 54.7 40 60.0


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