Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.1e-37 157.9 78 100.0
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.4e-31 137.9 71 94.4
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 2.2e-27 125.2 71 81.7
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 3.8e-27 124.4 71 83.1
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 6.5e-27 123.6 71 81.7
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 6.5e-27 123.6 72 79.2
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 8.5e-27 123.2 71 81.7
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 8.5e-27 123.2 71 80.3
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.9e-26 122.1 71 80.3
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 1.9e-26 122.1 71 80.3
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 1.9e-26 122.1 71 81.7
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 2.5e-26 121.7 71 78.9
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 2.5e-26 121.7 71 80.3
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 2.5e-26 121.7 71 77.5
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 2.5e-26 121.7 67 85.1
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 2.5e-26 121.7 67 85.1
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 2.5e-26 121.7 71 78.9
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 3.2e-26 121.3 71 80.3
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.2e-26 121.3 71 80.3
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.2e-26 121.3 71 80.3
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 3.2e-26 121.3 71 80.3
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 3.2e-26 121.3 71 77.5
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 3.2e-26 121.3 71 78.9
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 3.2e-26 121.3 71 80.3
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 5.5e-26 120.6 71 76.1
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 5.5e-26 120.6 71 80.3
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 5.5e-26 120.6 71 77.5
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 5.5e-26 120.6 71 77.5
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 7.2e-26 120.2 71 78.9
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 7.2e-26 120.2 71 77.5
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 9.4e-26 119.8 71 77.5
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 1.2e-25 119.4 71 78.9
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.2e-25 119.4 71 78.9
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 1.6e-25 119.0 71 78.9
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 1.6e-25 119.0 72 76.4
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 2.1e-25 118.6 71 77.5
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 2.1e-25 118.6 71 76.1
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 2.7e-25 118.2 71 77.5
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 2.7e-25 118.2 71 77.5
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 2.7e-25 118.2 71 77.5
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 2.7e-25 118.2 71 76.1
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 3.6e-25 117.9 71 77.5
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 3.6e-25 117.9 71 76.1
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 3.6e-25 117.9 71 74.6
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 4.7e-25 117.5 67 82.1
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 4.7e-25 117.5 72 72.2
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.7e-25 117.5 72 72.2
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.7e-25 117.5 72 72.2
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 4.7e-25 117.5 70 78.6
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 4.7e-25 117.5 72 72.2
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 6.1e-25 117.1 71 74.6
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 8.0e-25 116.7 71 77.5
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 8.0e-25 116.7 71 74.6
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.0e-24 116.3 71 76.1
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 1.4e-24 115.9 71 76.1
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.4e-24 115.9 67 82.1
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.8e-24 115.5 69 78.3
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 1.8e-24 115.5 71 74.6
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 1.8e-24 115.5 71 73.2
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 2.3e-24 115.2 66 80.3
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 2.3e-24 115.2 66 81.8
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 3.0e-24 114.8 71 76.1
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 3.0e-24 114.8 66 80.3
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 3.0e-24 114.8 71 76.1
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 4.0e-24 114.4 71 76.1
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 4.0e-24 114.4 71 74.6
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 5.2e-24 114.0 72 73.6
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 5.2e-24 114.0 72 73.6
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 5.2e-24 114.0 68 77.9
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 6.8e-24 113.6 67 80.6
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 8.8e-24 113.2 71 73.2
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.2e-23 112.8 71 74.6
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 1.2e-23 112.8 70 74.3
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 1.5e-23 112.5 71 73.2
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 3.4e-23 111.3 70 72.9
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 3.4e-23 111.3 71 73.2
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 4.4e-23 110.9 69 73.9
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 4.4e-23 110.9 69 73.9
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 4.4e-23 110.9 69 73.9
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 4.4e-23 110.9 69 73.9
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 4.4e-23 110.9 69 73.9
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 4.4e-23 110.9 70 72.9
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 5.7e-23 110.5 70 72.9
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 5.7e-23 110.5 66 78.8
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 5.7e-23 110.5 71 73.2
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 9.8e-23 109.8 70 71.4
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 9.8e-23 109.8 70 71.4
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 9.8e-23 109.8 69 76.8
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.7e-22 109.0 83 62.7
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 2.2e-22 108.6 70 70.0
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 7.0e-21 103.6 84 58.3
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 3.3e-18 94.7 55 76.4
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 3.6e-17 91.3 65 61.5
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 1.0e-16 89.7 72 56.9
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 2.3e-16 88.6 59 67.8
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 2.3e-16 88.6 59 67.8
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 2.3e-16 88.6 55 70.9
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.0e-16 87.8 53 73.6
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 4.0e-16 87.8 52 71.2
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 9.8e-15 83.2 68 60.3
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 1.1e-13 79.7 48 70.8
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.4e-13 79.3 59 62.7
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 2.4e-13 78.6 48 68.8
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 9.2e-13 76.6 48 68.8
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 2.7e-12 75.1 48 66.7
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 2.7e-12 75.1 44 72.7
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 7.8e-12 73.6 49 63.3
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.2e-09 66.2 49 57.1
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.4e-08 62.8 37 81.1
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 2.9e-06 55.1 56 48.2
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 4.9e-06 54.3 55 47.3


User provided reference genes

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