Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011100 Vanilla planifolia HOM05D014114 ORTHO05D008290 1.2e-217 759.6 400 100.0
HPP92_011114 Vanilla planifolia HOM05D014114 ORTHO05D000368 3.0e-192 675.2 356 100.0
Zm00001eb207690 Zea mays HOM05D014114 ORTHO05D003593 1.7e-54 217.6 354 39.8
Os02g0160200 Oryza sativa ssp. japonica HOM05D014114 ORTHO05D003593 2.2e-54 217.2 352 38.9
Zm00001eb232670 Zea mays HOM05D014114 ORTHO05D008290 2.0e-50 204.1 354 38.7
MBI02_g05998_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 4.1e-32 143.3 353 30.3
MBI18_g07602_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D008290 9.4e-29 132.1 411 30.7
MBI02_g05996_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 1.4e-27 128.3 364 29.9
MBI18_g07596_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 1.1e-24 118.6 351 31.6
HPP92_014112 Vanilla planifolia HOM05D000312 ORTHO05D008290 1.1e-24 118.6 353 28.3
HPP92_017621 Vanilla planifolia HOM05D000576 ORTHO05D000368 2.4e-24 117.5 352 28.4
Aqoxy4G01472 Aquilegia oxysepala HOM05D000312 ORTHO05D000368 3.5e-23 113.6 348 27.3
CSS0047483 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D008290 1.5e-21 108.2 357 26.9
Os06g0685200 Oryza sativa ssp. japonica HOM05D014114 ORTHO05D008290 4.2e-21 106.7 336 27.1
Aqoxy4G01471 Aquilegia oxysepala HOM05D000312 ORTHO05D008290 9.5e-21 105.5 348 25.0
Hund23632 Selenicereus undatus HOM05D000312 ORTHO05D008290 4.7e-20 103.2 367 25.6
Ah.09g236020 Amaranthus hybridus HOM05D000312 ORTHO05D008290 6.8e-19 99.4 357 26.9
Aqoxy4G01629 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 1.7e-17 94.7 357 25.8
AUR62014732 Chenopodium quinoa HOM05D000576 ORTHO05D008290 2.2e-17 94.4 360 25.6
Zm00001eb127920 Zea mays HOM05D014114 ORTHO05D000368 2.2e-17 94.4 364 29.4
EL10Ac8g20622 Beta vulgaris HOM05D000312 ORTHO05D008290 3.1e-16 90.5 399 23.3
Zm00001eb273550 Zea mays HOM05D014114 ORTHO05D008290 5.4e-16 89.7 371 26.1
MBI02_g05995_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 7.0e-16 89.4 347 24.5
Zm00001eb152580 Zea mays HOM05D014114 ORTHO05D000368 2.0e-15 87.8 307 29.3
MBI18_g07597_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 3.5e-15 87.0 286 28.0
Sc14g0001610 Simmondsia chinensis HOM05D007484 ORTHO05D008290 5.9e-15 86.3 367 27.5
MBI16_g01187_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 7.8e-15 85.9 238 33.2
Nn1g03911 Nelumbo nucifera HOM05D000576 ORTHO05D003312 2.1e-12 77.8 348 24.7
Medtr7g076760 Medicago truncatula HOM05D007484 ORTHO05D008290 6.1e-12 76.3 259 26.3
TAR629G2777 Trochodendron aralioides HOM05D003087 ORTHO05D003312 1.4e-11 75.1 365 24.1
Prupe.4G036700 Prunus persica HOM05D007484 ORTHO05D008290 1.8e-11 74.7 356 27.0
Zm00001eb411850 Zea mays HOM05D014114 ORTHO05D000368 1.8e-11 74.7 331 27.8
MBI18_g07599_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 4.0e-11 73.6 254 31.1
Aqoxy5G04185 Aquilegia oxysepala HOM05D000015 ORTHO05D002445 5.2e-11 73.2 346 25.7
MBI02_g05997_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 5.2e-11 73.2 281 21.4
Nn5g27409 Nelumbo nucifera HOM05D000576 ORTHO05D000368 5.2e-11 73.2 171 30.4
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 1.2e-10 72.0 297 27.6
TAR623G0165 Trochodendron aralioides HOM05D003242 ORTHO05D003593 2.0e-10 71.2 249 26.9
Sabra11G0029500 Salix brachista HOM05D007484 ORTHO05D008290 3.4e-10 70.5 296 25.7
GSVIVG01016605001 Vitis vinifera HOM05D003242 ORTHO05D003593 2.2e-09 67.8 274 26.6
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 4.9e-09 66.6 332 26.5
MD12G1064700 Malus domestica HOM05D000576 ORTHO05D000368 8.3e-09 65.9 347 22.8
PSO541G0345 Papaver somniferum HOM05D000051 ORTHO05D000015 1.1e-08 65.5 297 26.6
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 1.4e-08 65.1 277 27.1
TAR362G1194 Trochodendron aralioides HOM05D000576 ORTHO05D003312 1.4e-08 65.1 222 27.5
Lj6g0012024 Lotus japonicus HOM05D007484 ORTHO05D008290 1.8e-08 64.7 296 27.7
Potri.011G042900 Populus trichocarpa HOM05D007484 ORTHO05D008290 2.4e-08 64.3 290 26.9
Potri.004G034500 Populus trichocarpa HOM05D007484 ORTHO05D008290 4.1e-08 63.5 292 26.4
CANSAT56G1153 Cannabis sativa HOM05D007484 ORTHO05D008290 5.4e-08 63.2 369 24.9
Duzib128G0419 Durio zibethinus HOM05D003242 ORTHO05D003593 5.4e-08 63.2 281 26.3
Dinv37215 Davidia involucrata HOM05D003242 ORTHO05D003593 7.0e-08 62.8 270 27.4
TWI38G0929 Tripterygium wilfordii HOM05D003087 ORTHO05D003312 7.0e-08 62.8 369 23.6
Solyc02g079120.1 Solanum lycopersicum HOM05D007484 ORTHO05D008290 9.2e-08 62.4 342 24.0
Rhsim06G0214600 Rhododendron simsii HOM05D003087 ORTHO05D003312 1.2e-07 62.0 362 25.4
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 1.6e-07 61.6 271 26.2
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 1.6e-07 61.6 356 23.3
MBI18_g07600_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 2.0e-07 61.2 290 24.1
Thecc.10G045500 Theobroma cacao HOM05D003242 ORTHO05D003593 2.0e-07 61.2 268 26.1
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.0e-07 61.2 331 23.9
Dinv26720 Davidia involucrata HOM05D000576 ORTHO05D000368 3.5e-07 60.5 372 23.4
Sabra16G0285500 Salix brachista HOM05D003087 ORTHO05D003312 3.5e-07 60.5 272 26.1
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 3.5e-07 60.5 274 27.7
Thecc.05G046100 Theobroma cacao HOM05D003242 ORTHO05D003593 4.6e-07 60.1 283 23.7
Atru.chr4.3173 Acer truncatum HOM05D000576 ORTHO05D000368 5.9e-07 59.7 347 25.9
Duzib128G0244 Durio zibethinus HOM05D003242 ORTHO05D003593 5.9e-07 59.7 276 24.3
Ciclev10015410m.g Citrus clementina HOM05D000576 ORTHO05D000368 7.8e-07 59.3 248 24.2
Gorai.009G318800 Gossypium raimondii HOM05D003242 ORTHO05D003593 7.8e-07 59.3 323 23.5
Atru.chr4.3172 Acer truncatum HOM05D000576 ORTHO05D000368 1.0e-06 58.9 347 25.4
QL10p004694 Quercus lobata HOM05D000576 ORTHO05D000368 1.0e-06 58.9 348 23.3
SalBow8G3555 Salvia bowleyana HOM05D003242 ORTHO05D003593 1.0e-06 58.9 267 24.3
Dinv40482 Davidia involucrata HOM05D007484 ORTHO05D008290 1.3e-06 58.5 277 24.5
Migut.C01162 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.3e-06 58.5 280 23.6
Gohir.A05G367500 Gossypium hirsutum HOM05D023832 ORTHO05D022144 1.3e-06 58.5 284 24.6
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 1.3e-06 58.5 344 26.2
Ciclev10008427m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.7e-06 58.2 249 25.7
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 1.7e-06 58.2 351 23.1
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.7e-06 58.2 341 24.6
Dinv01310 Davidia involucrata HOM05D000576 ORTHO05D000368 2.3e-06 57.8 372 23.1
MBI02_g29707_MAGBIO Magnolia biondii HOM05D003087 ORTHO05D003312 2.3e-06 57.8 350 25.4
SalBow8G5427 Salvia bowleyana HOM05D003242 ORTHO05D003593 2.3e-06 57.8 267 24.0
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.3e-06 57.8 342 21.9
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 3.0e-06 57.4 332 25.3
Potri.001G420500 Populus trichocarpa HOM05D003087 ORTHO05D003312 3.0e-06 57.4 272 25.7
QL08p012174 Quercus lobata HOM05D003087 ORTHO05D003312 3.9e-06 57.0 362 21.3
TWI18G0091 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.9e-06 57.0 262 25.6
EL10Ac4g08146 Beta vulgaris HOM05D000300 ORTHO05D008505 5.0e-06 56.6 175 29.7
AUR62016913 Chenopodium quinoa HOM05D000576 ORTHO05D008290 5.0e-06 56.6 351 21.9
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 5.0e-06 56.6 332 25.3
MD11G1222800 Malus domestica HOM05D003087 ORTHO05D003312 5.0e-06 56.6 353 22.7
Duzib114G0726 Durio zibethinus HOM05D003242 ORTHO05D003593 6.6e-06 56.2 250 25.2
TWI18G0229 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 6.6e-06 56.2 351 21.4
Atru.chr10.2009 Acer truncatum HOM05D007484 ORTHO05D008290 8.6e-06 55.8 292 24.3
Cfa020391 Carpinus fangiana HOM05D003087 ORTHO05D003312 8.6e-06 55.8 266 23.3
Gohir.D05G300800 Gossypium hirsutum HOM05D003242 ORTHO05D003593 8.6e-06 55.8 323 23.2
QL08p011993 Quercus lobata HOM05D003087 ORTHO05D003312 8.6e-06 55.8 362 21.0


User provided reference genes

Program Settings