Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 3.7e-73 278.1 139 100.0
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 1.3e-46 189.9 124 74.2
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 4.7e-44 181.4 137 67.9
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 6.2e-44 181.0 137 65.7
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 1.8e-43 179.5 137 66.4
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 2.3e-43 179.1 124 67.7
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 3.1e-43 178.7 138 66.7
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 4.0e-43 178.3 141 64.5
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 5.2e-43 177.9 138 65.2
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 5.2e-43 177.9 137 66.4
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 8.9e-43 177.2 137 65.0
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 1.2e-42 176.8 137 65.0
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 2.0e-42 176.0 137 65.0
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 2.0e-42 176.0 124 70.2
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 3.4e-42 175.3 124 69.4
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 5.8e-42 174.5 138 63.0
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 5.8e-42 174.5 127 66.1
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 7.5e-42 174.1 137 62.8
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 7.5e-42 174.1 145 63.4
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 7.5e-42 174.1 137 64.2
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 9.8e-42 173.7 137 64.2
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 1.3e-41 173.3 138 63.0
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 1.7e-41 172.9 124 67.7
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 1.7e-41 172.9 138 62.3
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 1.7e-41 172.9 138 62.3
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.7e-41 172.9 136 64.0
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.7e-41 172.9 136 64.0
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 2.2e-41 172.6 138 62.3
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 2.2e-41 172.6 137 64.2
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 2.9e-41 172.2 137 63.5
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 4.9e-41 171.4 138 61.6
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 6.4e-41 171.0 137 63.5
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 6.4e-41 171.0 137 62.0
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 8.3e-41 170.6 137 60.6
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 1.1e-40 170.2 137 63.5
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 1.1e-40 170.2 135 63.0
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 1.1e-40 170.2 129 65.9
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 1.4e-40 169.9 127 64.6
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 1.4e-40 169.9 135 63.0
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 1.9e-40 169.5 145 59.3
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 2.4e-40 169.1 129 61.2
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 3.2e-40 168.7 137 60.6
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 3.2e-40 168.7 124 65.3
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 3.2e-40 168.7 137 59.1
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 4.1e-40 168.3 134 64.2
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 9.2e-40 167.2 127 63.8
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 1.2e-39 166.8 124 64.5
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 1.2e-39 166.8 122 63.9
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 2.7e-39 165.6 123 63.4
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 2.7e-39 165.6 140 61.4
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 2.7e-39 165.6 124 63.7
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 2.7e-39 165.6 139 60.4
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 3.5e-39 165.2 138 62.3
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 6.0e-39 164.5 153 57.5
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 1.0e-38 163.7 135 61.5
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 1.3e-38 163.3 128 61.7
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 2.3e-38 162.5 129 63.6
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 2.3e-38 162.5 129 63.6
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 2.3e-38 162.5 129 61.2
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 2.3e-38 162.5 123 65.0
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 3.0e-38 162.2 128 61.7
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 3.9e-38 161.8 129 62.8
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 6.6e-38 161.0 137 60.6
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 6.6e-38 161.0 123 61.0
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 6.6e-38 161.0 123 63.4
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 1.5e-37 159.8 125 62.4
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 3.3e-37 158.7 123 61.0
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 4.3e-37 158.3 127 59.8
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 9.5e-37 157.1 129 58.9
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 1.2e-36 156.8 138 58.0
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 2.8e-36 155.6 138 56.5
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 6.2e-36 154.5 136 56.6
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 1.1e-35 153.7 138 57.2
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 4.0e-35 151.8 132 58.3
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 2.0e-34 149.4 119 60.5
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 2.6e-34 149.1 105 67.6
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 3.7e-33 145.2 94 75.5
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 4.1e-32 141.7 126 52.4
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 9.2e-32 140.6 137 56.9
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 6.0e-31 137.9 171 45.6
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 1.0e-30 137.1 124 56.5
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 3.9e-30 135.2 123 52.0
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 1.9e-29 132.9 110 60.9
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 1.9e-29 132.9 188 43.1
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.5e-29 132.5 97 67.0
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 2.5e-29 132.5 136 52.9
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 5.6e-29 131.3 137 52.6
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 7.3e-29 131.0 137 53.3
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 7.3e-29 131.0 93 68.8
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 9.5e-29 130.6 112 57.1
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 1.2e-28 130.2 94 68.1
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 6.2e-28 127.9 135 45.9
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 8.1e-28 127.5 99 65.7
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 1.4e-27 126.7 123 55.3
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 1.8e-27 126.3 106 61.3
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 2.3e-27 125.9 129 50.4
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 2.0e-26 122.9 135 47.4
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 5.8e-26 121.3 142 45.8
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 1.7e-25 119.8 95 62.1
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 2.2e-25 119.4 94 62.8
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 2.9e-25 119.0 135 48.1
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 4.9e-25 118.2 129 49.6
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 8.6e-22 107.5 83 66.3
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 8.6e-22 107.5 99 56.6
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 2.8e-20 102.4 137 41.6
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 3.6e-20 102.1 80 58.8
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 1.1e-19 100.5 78 59.0
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 2.4e-19 99.4 85 57.6
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 1.3e-17 93.6 86 57.0
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 2.2e-17 92.8 72 65.3
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 2.9e-17 92.4 166 33.1
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 1.4e-16 90.1 69 63.8
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 2.4e-16 89.4 123 39.8
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 3.2e-16 89.0 85 52.9
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-13 80.5 67 53.7
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 7.3e-13 77.8 54 68.5
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 3.1e-11 72.4 56 58.9
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 5.4e-08 61.6 39 69.2
Cfa025972 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.2e-07 60.5 119 32.8


User provided reference genes

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