Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 4.2e-47 191.0 98 100.0
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.8e-45 185.7 98 96.9
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 4.7e-30 134.4 84 76.2
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.1e-28 129.8 84 72.6
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 7.4e-28 127.1 89 69.7
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 9.7e-28 126.7 87 71.3
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 1.7e-27 125.9 91 70.3
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.2e-27 125.6 84 71.4
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 2.2e-27 125.6 85 71.8
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.2e-27 125.6 85 71.8
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 2.2e-27 125.6 86 69.8
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 2.8e-27 125.2 94 71.3
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 3.7e-27 124.8 88 72.7
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 3.7e-27 124.8 88 69.3
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 4.8e-27 124.4 91 69.2
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.8e-27 124.4 91 67.0
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.8e-27 124.4 91 67.0
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 6.3e-27 124.0 97 69.1
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 6.3e-27 124.0 90 67.8
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 8.2e-27 123.6 91 68.1
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 8.2e-27 123.6 88 71.6
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.1e-26 123.2 80 77.5
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 1.1e-26 123.2 88 68.2
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.1e-26 123.2 84 71.4
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.8e-26 122.5 89 69.7
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 2.4e-26 122.1 80 73.8
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.4e-26 122.1 85 69.4
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 3.1e-26 121.7 84 72.6
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 4.1e-26 121.3 96 66.7
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 4.1e-26 121.3 82 72.0
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 4.1e-26 121.3 81 71.6
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 4.1e-26 121.3 84 69.0
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 5.3e-26 120.9 85 67.1
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 5.3e-26 120.9 84 70.2
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 7.0e-26 120.6 93 66.7
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 7.0e-26 120.6 81 71.6
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 9.1e-26 120.2 93 66.7
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 9.1e-26 120.2 85 69.4
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 9.1e-26 120.2 85 68.2
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 9.1e-26 120.2 85 67.1
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 9.1e-26 120.2 81 74.1
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 1.2e-25 119.8 76 75.0
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.2e-25 119.8 91 64.8
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.2e-25 119.8 84 71.4
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.2e-25 119.8 93 65.6
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.5e-25 119.4 81 70.4
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.5e-25 119.4 79 73.4
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 2.0e-25 119.0 85 68.2
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 2.6e-25 118.6 84 67.9
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 2.6e-25 118.6 85 67.1
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.6e-25 118.6 85 70.6
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.6e-25 118.6 85 70.6
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 2.6e-25 118.6 85 70.6
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 2.6e-25 118.6 80 71.2
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 3.5e-25 118.2 75 74.7
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.5e-25 118.2 70 78.6
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 5.9e-25 117.5 86 66.3
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 5.9e-25 117.5 79 70.9
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 7.7e-25 117.1 79 70.9
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 7.7e-25 117.1 92 65.2
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 1.0e-24 116.7 94 66.0
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 1.3e-24 116.3 82 70.7
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.3e-24 116.3 86 66.3
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.3e-24 116.3 86 66.3
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 1.3e-24 116.3 76 72.4
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.3e-24 116.3 87 63.2
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.3e-24 116.3 93 64.5
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 1.3e-24 116.3 90 62.2
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.7e-24 115.9 78 70.5
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.7e-24 115.9 70 78.6
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 2.2e-24 115.5 79 68.4
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 2.2e-24 115.5 84 67.9
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.2e-24 115.5 79 70.9
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 2.2e-24 115.5 93 63.4
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 2.2e-24 115.5 72 73.6
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.9e-24 115.2 75 73.3
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 2.9e-24 115.2 94 62.8
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 2.9e-24 115.2 84 67.9
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 2.9e-24 115.2 84 67.9
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 2.9e-24 115.2 84 67.9
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 2.9e-24 115.2 84 67.9
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 2.9e-24 115.2 86 65.1
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 2.9e-24 115.2 85 67.1
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 2.9e-24 115.2 86 66.3
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 2.9e-24 115.2 84 69.0
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 3.8e-24 114.8 70 77.1
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 3.8e-24 114.8 76 68.4
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 5.0e-24 114.4 89 64.0
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 5.0e-24 114.4 81 66.7
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 5.0e-24 114.4 81 66.7
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 5.0e-24 114.4 81 66.7
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 5.0e-24 114.4 83 65.1
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 5.0e-24 114.4 70 75.7
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.1e-23 113.2 79 70.9
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.5e-23 112.8 75 72.0
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.5e-23 112.8 88 63.6
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 1.9e-23 112.5 87 66.7
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.5e-23 112.1 107 57.9
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.2e-22 109.8 81 66.7
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 2.1e-22 109.0 67 74.6
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.7e-22 108.6 105 55.2
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 8.0e-22 107.1 67 74.6
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.0e-21 105.1 91 60.4
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 3.0e-21 105.1 79 68.4
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 6.7e-21 104.0 68 73.5
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 6.7e-21 104.0 70 71.4
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.1e-20 103.2 79 68.4
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 1.1e-20 103.2 66 75.8
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.5e-20 102.8 70 70.0
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 2.0e-20 102.4 78 69.2
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 2.0e-20 102.4 83 66.3
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 5.7e-20 100.9 72 72.2
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 7.4e-20 100.5 70 72.9
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 9.7e-20 100.1 79 64.6
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 9.7e-20 100.1 62 77.4
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 2.2e-19 99.0 78 66.7
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 3.1e-18 95.1 63 71.4
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 7.0e-18 94.0 83 60.2
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 1.6e-17 92.8 74 59.5
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 3.2e-15 85.1 81 54.3
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 1.8e-13 79.3 86 51.2
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 4.0e-13 78.2 54 70.4
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 3.4e-12 75.1 87 47.1
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 3.7e-11 71.6 62 53.2
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 2.4e-10 68.9 51 62.7
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 6.5e-08 60.8 49 61.2
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.9e-07 59.3 73 42.5
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 3.2e-07 58.5 78 48.7


User provided reference genes

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