Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010348 Vanilla planifolia HOM05D005382 ORTHO05D006795 1.4e-111 406.4 213 100.0
Manes.11G069200 Manihot esculenta HOM05D005382 ORTHO05D006795 1.5e-57 226.9 212 59.4
Potri.001G041900 Populus trichocarpa HOM05D005382 ORTHO05D006795 2.6e-57 226.1 211 60.7
MBI15_g08404_MAGBIO Magnolia biondii HOM05D005382 ORTHO05D006795 7.4e-57 224.6 196 62.8
Potri.003G184925 Populus trichocarpa HOM05D005382 ORTHO05D006795 1.3e-56 223.8 210 60.0
COL.COLO4_26772 Corchorus olitorius HOM05D005382 ORTHO05D006795 1.7e-56 223.4 207 59.9
Gohir.A11G075200 Gossypium hirsutum HOM05D005382 ORTHO05D006795 2.2e-56 223.0 202 61.4
Gorai.007G085500 Gossypium raimondii HOM05D005382 ORTHO05D006795 2.8e-56 222.6 202 61.4
Nn8g40079 Nelumbo nucifera HOM05D005382 ORTHO05D006795 3.7e-56 222.2 205 62.9
Sabra03G0135500 Salix brachista HOM05D005382 ORTHO05D006795 3.7e-56 222.2 208 59.6
Thecc.06G046600 Theobroma cacao HOM05D005382 ORTHO05D006795 1.1e-55 220.7 200 60.0
CDE04G1090 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 2.4e-55 219.5 209 61.2
Nitab4.5_0002700g0060 Nicotiana tabacum HOM05D005382 ORTHO05D006795 7.0e-55 218.0 203 60.6
Ciclev10026461m.g Citrus clementina HOM05D005382 ORTHO05D006795 9.1e-55 217.6 200 58.0
Peaxi162Scf00314g01032 Petunia axillaris HOM05D005382 ORTHO05D006795 9.1e-55 217.6 203 58.6
TAR625G1145 Trochodendron aralioides HOM05D005382 ORTHO05D006795 1.6e-54 216.9 210 58.6
Nn8g40087 Nelumbo nucifera HOM05D005382 ORTHO05D006795 2.0e-54 216.5 205 61.0
Nitab4.5_0004738g0090 Nicotiana tabacum HOM05D005382 ORTHO05D006795 2.6e-54 216.1 202 58.4
MELO3C023486.2 Cucumis melo HOM05D005382 ORTHO05D006795 3.5e-54 215.7 195 61.0
Lalb_Chr25g0278731 Lupinus albus HOM05D005382 ORTHO05D006795 3.5e-54 215.7 205 55.1
Actinidia08935 Actinidia chinensis HOM05D005382 ORTHO05D006795 4.5e-54 215.3 205 58.5
CiPaw.02G163400 Carya illinoinensis HOM05D005382 ORTHO05D006795 5.9e-54 214.9 204 60.8
Lj3g0027435 Lotus japonicus HOM05D005382 ORTHO05D006795 5.9e-54 214.9 212 58.0
Sabra01G0028700 Salix brachista HOM05D005382 ORTHO05D006795 7.7e-54 214.5 210 58.1
ClCG09G003490 Citrullus lanatus HOM05D005382 ORTHO05D006795 1.0e-53 214.2 193 60.6
PGR102G0492 Punica granatum HOM05D005382 ORTHO05D006795 1.3e-53 213.8 203 57.6
Gohir.D11G079900 Gossypium hirsutum HOM05D005382 ORTHO05D006795 2.2e-53 213.0 183 64.5
TWI12G1456 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 2.2e-53 213.0 206 59.2
PSO782G0145 Papaver somniferum HOM05D005382 ORTHO05D006795 3.8e-53 212.2 203 58.1
CAN.G1008.7 Capsicum annuum HOM05D005382 ORTHO05D006795 8.5e-53 211.1 201 57.2
FAN05G5289 Fragaria x ananassa HOM05D005382 ORTHO05D006795 8.5e-53 211.1 205 59.5
Glyma.08G220400 Glycine max HOM05D005382 ORTHO05D006795 1.1e-52 210.7 200 60.0
MSTRG.22842 Avicennia marina HOM05D005382 ORTHO05D006795 1.5e-52 210.3 212 56.6
CiPaw.01G256500 Carya illinoinensis HOM05D005382 ORTHO05D006795 1.9e-52 209.9 204 59.8
FAN09G0036 Fragaria x ananassa HOM05D005382 ORTHO05D006795 1.9e-52 209.9 200 60.0
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla HOM05D005382 ORTHO05D006795 1.9e-52 209.9 203 60.1
Cc04_g05300 Coffea canephora HOM05D005382 ORTHO05D006795 2.5e-52 209.5 202 56.4
Manes.04G100900 Manihot esculenta HOM05D005382 ORTHO05D006795 3.2e-52 209.1 199 59.3
FvH4_6g28270 Fragaria vesca HOM05D005382 ORTHO05D006795 4.2e-52 208.8 205 59.0
Medtr4g007700 Medicago truncatula HOM05D005382 ORTHO05D006795 7.2e-52 208.0 195 57.4
CsaV3_7G031710 Cucumis sativus L. HOM05D005382 ORTHO05D006795 9.4e-52 207.6 207 58.0
RcHm_v2.0_Chr2g0132311 Rosa chinensis HOM05D005382 ORTHO05D006795 1.2e-51 207.2 205 59.0
Glyma.07G021400 Glycine max HOM05D005382 ORTHO05D006795 1.6e-51 206.8 200 58.5
HanXRQChr09g0274181 Helianthus annuus HOM05D005382 ORTHO05D006795 1.6e-51 206.8 201 58.2
MSTRG.9395 Avicennia marina HOM05D005382 ORTHO05D006795 2.1e-51 206.5 201 58.2
Eucgr.F03985 Eucalyptus grandis HOM05D005382 ORTHO05D006795 2.1e-51 206.5 202 59.4
PSO063G0682 Papaver somniferum HOM05D005382 ORTHO05D006795 2.7e-51 206.1 203 57.1
MSTRG.11221 Avicennia marina HOM05D005382 ORTHO05D006795 3.6e-51 205.7 214 56.1
Migut.I00626 Erythranthe guttata HOM05D005382 ORTHO05D006795 6.1e-51 204.9 209 56.9
Sed0008280 Sechium edule HOM05D005382 ORTHO05D006795 6.1e-51 204.9 207 55.6
DCAR_021374 Daucus carota HOM05D005382 ORTHO05D006795 8.0e-51 204.5 195 57.9
Lsat_1_v5_gn_1_30801 Lactuca sativa HOM05D005382 ORTHO05D006795 8.0e-51 204.5 210 56.2
SGA_v2.0_scaffold515G52664 Striga asiatica HOM05D003096 ORTHO05D003521 1.8e-50 203.4 203 55.7
CSS0039254 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 2.3e-50 203.0 208 55.8
Dinv21426 Davidia involucrata HOM05D005382 ORTHO05D006795 2.3e-50 203.0 203 58.6
GSVIVG01016103001 Vitis vinifera HOM05D005382 ORTHO05D006795 3.0e-50 202.6 205 57.1
Rhsim08G0203100 Rhododendron simsii HOM05D005382 ORTHO05D006795 5.2e-50 201.8 218 54.6
VMungo0647G2390 Vigna mungo HOM05D005382 ORTHO05D006795 5.2e-50 201.8 203 56.7
FAN14G0578 Fragaria x ananassa HOM05D005382 ORTHO05D006795 6.7e-50 201.4 183 62.8
AUR62032996 Chenopodium quinoa HOM05D005382 ORTHO05D006795 8.8e-50 201.1 206 55.8
HanXRQChr04g0100021 Helianthus annuus HOM05D005382 ORTHO05D006795 8.8e-50 201.1 204 53.9
Lalb_Chr01g0011991 Lupinus albus HOM05D005382 ORTHO05D006795 1.5e-49 200.3 201 54.7
Phvul.008G253200 Phaseolus vulgaris HOM05D005382 ORTHO05D006795 1.5e-49 200.3 200 56.5
BraA07t31983Z Brassica rapa HOM05D005382 ORTHO05D006795 3.3e-49 199.1 211 55.9
ECA232G4196 Erigeron canadensis HOM05D005382 ORTHO05D006795 4.4e-49 198.7 204 54.9
MD09G1227600 Malus domestica HOM05D005382 ORTHO05D006795 5.7e-49 198.4 207 54.6
A07p44750 Brassica napus HOM05D005382 ORTHO05D006795 7.5e-49 198.0 211 55.9
Sopen03g036580 Solanum pennellii HOM05D005382 ORTHO05D006795 9.7e-49 197.6 201 55.2
C06p29630 Brassica napus HOM05D005382 ORTHO05D006795 1.3e-48 197.2 203 55.7
BolC6t38128H Brassica oleracea HOM05D005382 ORTHO05D006795 1.3e-48 197.2 203 55.7
ECA247G2189 Erigeron canadensis HOM05D005382 ORTHO05D006795 1.3e-48 197.2 204 53.9
Eucgr.J03130 Eucalyptus grandis HOM05D005382 ORTHO05D006795 1.3e-48 197.2 202 54.5
Aa31LG4G1250 Aethionema arabicum HOM05D005382 ORTHO05D006795 1.7e-48 196.8 211 55.0
MD17G1226400 Malus domestica HOM05D005382 ORTHO05D006795 2.8e-48 196.1 201 57.7
Sp5g34800 Schrenkiella parvula HOM05D005382 ORTHO05D006795 2.8e-48 196.1 202 55.0
SGA_v2.0_scaffold74G24593 Striga asiatica HOM05D005382 ORTHO05D006795 2.8e-48 196.1 199 55.3
Carub.0002s2660 Capsella rubella HOM05D005382 ORTHO05D006795 3.7e-48 195.7 203 55.7
Rhsim12G0185400 Rhododendron simsii HOM05D005382 ORTHO05D006795 3.7e-48 195.7 226 51.8
Solyc03g117670.4 Solanum lycopersicum HOM05D005382 ORTHO05D006795 3.7e-48 195.7 198 56.1
ATR0580G392 Amborella trichopoda HOM05D005382 ORTHO05D006795 4.8e-48 195.3 196 59.2
Os02g0793900 Oryza sativa ssp. japonica HOM05D005382 ORTHO05D006795 4.8e-48 195.3 202 56.9
BcaNung04166 Brassica carinata HOM05D005382 ORTHO05D006795 6.3e-48 194.9 204 55.4
QL05p036845 Quercus lobata HOM05D005382 ORTHO05D006795 6.3e-48 194.9 166 63.9
Sc12g0008250 Simmondsia chinensis HOM05D005382 ORTHO05D006795 6.3e-48 194.9 202 56.4
AL2G40440 Arabidopsis lyrata HOM05D005382 ORTHO05D006795 8.2e-48 194.5 207 54.1
AT1G80940 Arabidopsis thaliana HOM05D005382 ORTHO05D006795 8.2e-48 194.5 210 54.8
BcaB02g07237 Brassica carinata HOM05D005382 ORTHO05D006795 8.2e-48 194.5 207 55.1
Prupe.3G103600 Prunus persica HOM05D005382 ORTHO05D006795 1.1e-47 194.1 139 74.1
THA.LOC104808172 Tarenaya hassleriana HOM05D005382 ORTHO05D006795 1.1e-47 194.1 208 54.8
BcaC08g47533 Brassica carinata HOM05D005382 ORTHO05D006795 1.4e-47 193.7 211 55.0
C06p53570 Brassica napus HOM05D005382 ORTHO05D006795 1.4e-47 193.7 206 55.8
BolC6t40373H Brassica oleracea HOM05D005382 ORTHO05D006795 1.4e-47 193.7 211 55.0
Thhalv10019121m.g Eutrema salsugineum HOM05D005382 ORTHO05D006795 1.4e-47 193.7 210 53.8
TPR.G3367 Trifolium pratense HOM05D005382 ORTHO05D006795 1.4e-47 193.7 184 58.7
EL10Ac8g19398 Beta vulgaris HOM05D005382 ORTHO05D006795 2.4e-47 193.0 199 54.8
FAN02G4537 Fragaria x ananassa HOM05D005382 ORTHO05D006795 2.4e-47 193.0 140 74.3
A07p26960 Brassica napus HOM05D005382 ORTHO05D006795 5.3e-47 191.8 204 53.9
BraA07t30340Z Brassica rapa HOM05D005382 ORTHO05D006795 5.3e-47 191.8 204 53.9
Cfa001857 Carpinus fangiana HOM05D005382 ORTHO05D006795 5.3e-47 191.8 160 66.2
Lj5A81T85 Lonicera japonica HOM05D005382 ORTHO05D006795 7.0e-47 191.4 136 73.5
SalBow1G1272 Salvia bowleyana HOM05D005382 ORTHO05D006795 7.0e-47 191.4 164 63.4
BcaB02g08711 Brassica carinata HOM05D005382 ORTHO05D006795 9.1e-47 191.0 208 54.3
Haze_16689 Corylus avellana HOM05D005382 ORTHO05D006795 9.1e-47 191.0 147 70.1
Lsat_1_v5_gn_4_85061 Lactuca sativa HOM05D005382 ORTHO05D006795 9.1e-47 191.0 202 53.0
Psat7g262200 Pisum sativum HOM05D005382 ORTHO05D006795 9.1e-47 191.0 192 58.3
Duzib235G0288 Durio zibethinus HOM05D005382 ORTHO05D006795 1.6e-46 190.3 146 69.2
Duzib192G0805 Durio zibethinus HOM05D005382 ORTHO05D006795 3.5e-46 189.1 146 67.8
TWI75G0559 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 4.5e-46 188.7 140 70.0
PGSC0003DMG400014155 Solanum tuberosum HOM05D005382 ORTHO05D006795 6.5e-45 184.9 139 69.1
Zm00001eb257680 Zea mays HOM05D005382 ORTHO05D006795 6.5e-45 184.9 203 54.2
CDE07G1687 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 1.5e-44 183.7 142 69.7
CARHR073510 Cardamine hirsuta HOM05D005382 ORTHO05D006795 1.9e-44 183.3 146 66.4
vmacro16842 Vaccinium macrocarpon HOM05D005382 ORTHO05D006795 9.4e-44 181.0 175 58.9
Oeu003125.1 Olea europaea HOM05D005382 ORTHO05D006795 1.6e-43 180.3 160 60.0
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 2.1e-43 179.9 140 67.1
Oeu051555.1 Olea europaea HOM05D005382 ORTHO05D006795 2.7e-43 179.5 149 62.4
SEGI_41275 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 8.8e-42 174.5 137 67.9
Cpa.g.c28380.1 Carica papaya HOM05D005382 ORTHO05D006795 7.5e-41 171.4 126 71.4
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea HOM05D005382 ORTHO05D006795 1.4e-39 167.2 210 50.5
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea HOM05D005382 ORTHO05D006795 1.8e-39 166.8 210 50.5
Pp3c16_25700 Physcomitrium patens HOM05D005382 ORTHO05D006795 5.9e-38 161.8 138 61.6
Pp3c25_9780 Physcomitrium patens HOM05D005382 ORTHO05D006795 7.7e-38 161.4 140 60.7
Mapoly0128s0009 Marchantia polymorpha HOM05D005382 ORTHO05D006795 1.0e-37 161.0 131 64.9
CANSAT56G2690 Cannabis sativa HOM05D005382 ORTHO05D006795 3.8e-37 159.1 188 48.4
SMO145G0139 Selaginella moellendorffii HOM05D005382 ORTHO05D006795 1.1e-36 157.5 139 59.0
SEGI_02613 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 4.1e-31 139.0 111 64.9
Ah.14g085670 Amaranthus hybridus HOM05D005382 ORTHO05D006795 2.3e-29 133.3 200 43.5
Hund12559 Selenicereus undatus HOM05D005382 ORTHO05D006795 7.5e-25 118.2 139 48.9
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum HOM05D005382 ORTHO05D006795 8.3e-24 114.8 204 38.7
Actinidia36864 Actinidia chinensis HOM05D005382 ORTHO05D006795 1.2e-22 110.9 201 38.3
unitig_22.g6275 Utricularia gibba HOM05D005382 ORTHO05D006795 1.2e-22 110.9 74 78.4
BcaB07g33703 Brassica carinata HOM05D005382 ORTHO05D006795 7.8e-22 108.2 135 48.1
CSS0015514 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 7.8e-22 108.2 75 76.0
BcaB07g33704 Brassica carinata HOM05D005382 ORTHO05D006795 2.2e-16 90.1 63 69.8
BcaB07g33705 Brassica carinata HOM05D005382 ORTHO05D006795 2.2e-16 90.1 63 69.8
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis HOM05D005382 ORTHO05D006795 3.2e-15 86.3 84 58.3
Actinidia26580 Actinidia chinensis HOM05D005382 ORTHO05D006795 4.1e-15 85.9 64 65.6
TPR.G1583 Trifolium pratense HOM05D005382 ORTHO05D006795 6.8e-10 68.6 45 75.6


User provided reference genes

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