Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 2.4e-63 245.4 124 100.0
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 2.1e-43 179.1 120 81.7
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 3.7e-32 141.7 130 62.3
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 1.8e-31 139.4 124 62.1
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 2.0e-30 136.0 125 62.4
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 1.9e-28 129.4 125 60.0
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 9.4e-28 127.1 102 64.7
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 1.6e-27 126.3 126 59.5
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 2.1e-27 125.9 125 57.6
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 3.6e-27 125.2 121 60.3
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 6.1e-27 124.4 106 65.1
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 8.0e-27 124.0 106 64.2
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 1.8e-26 122.9 102 65.7
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 4.0e-26 121.7 126 57.1
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 6.7e-26 120.9 109 66.1
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 1.1e-25 120.2 104 62.5
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 1.5e-25 119.8 128 56.2
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 2.0e-25 119.4 109 66.1
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 2.0e-25 119.4 125 57.6
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 2.0e-25 119.4 125 55.2
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 2.0e-25 119.4 125 55.2
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 2.6e-25 119.0 128 57.0
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 2.6e-25 119.0 125 55.2
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 3.3e-25 118.6 109 65.1
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 7.5e-25 117.5 129 55.8
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 7.5e-25 117.5 128 57.0
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 7.5e-25 117.5 115 59.1
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 9.7e-25 117.1 128 55.5
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 9.7e-25 117.1 128 57.0
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 9.7e-25 117.1 125 56.8
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 1.3e-24 116.7 128 55.5
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 1.3e-24 116.7 99 64.6
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 1.7e-24 116.3 121 57.9
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 2.8e-24 115.5 126 56.3
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 3.7e-24 115.2 128 55.5
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 3.7e-24 115.2 129 51.9
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 6.3e-24 114.4 110 58.2
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 6.3e-24 114.4 130 52.3
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 8.2e-24 114.0 123 54.5
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 8.2e-24 114.0 99 63.6
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 1.1e-23 113.6 127 53.5
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 1.8e-23 112.8 118 56.8
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 1.8e-23 112.8 131 54.2
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 1.8e-23 112.8 129 55.8
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 2.4e-23 112.5 99 63.6
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 2.4e-23 112.5 113 58.4
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 2.4e-23 112.5 122 54.1
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 2.4e-23 112.5 100 61.0
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 2.4e-23 112.5 125 54.4
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 3.1e-23 112.1 115 54.8
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 4.1e-23 111.7 103 62.1
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 5.3e-23 111.3 128 53.1
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 5.3e-23 111.3 110 57.3
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 7.0e-23 110.9 104 59.6
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 7.0e-23 110.9 113 57.5
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 9.1e-23 110.5 110 58.2
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 2.7e-22 109.0 127 52.8
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 2.7e-22 109.0 98 57.1
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 2.7e-22 109.0 130 50.8
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 4.5e-22 108.2 130 51.5
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 5.9e-22 107.8 111 56.8
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 7.7e-22 107.5 95 62.1
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 1.0e-21 107.1 90 65.6
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 1.0e-21 107.1 111 56.8
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 1.0e-21 107.1 108 58.3
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 2.2e-21 105.9 110 54.5
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 2.9e-21 105.5 120 53.3
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 2.9e-21 105.5 124 53.2
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 2.9e-21 105.5 89 65.2
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 6.5e-21 104.4 123 56.9
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 1.1e-20 103.6 108 57.4
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 1.1e-20 103.6 89 65.2
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 1.1e-20 103.6 89 64.0
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 1.9e-20 102.8 89 62.9
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 1.9e-20 102.8 90 61.1
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 2.5e-20 102.4 106 53.8
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 1.2e-19 100.1 109 55.0
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 1.2e-19 100.1 109 55.0
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 2.1e-19 99.4 89 60.7
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 6.1e-19 97.8 103 53.4
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 1.4e-18 96.7 85 62.4
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 1.4e-18 96.7 84 64.3
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 1.4e-18 96.7 85 60.0
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 6.8e-18 94.4 165 40.0
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 2.0e-17 92.8 84 60.7
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 4.4e-17 91.7 84 59.5
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 1.7e-16 89.7 103 54.4
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 1.4e-15 86.7 100 53.0
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 1.4e-15 86.7 100 53.0
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 5.4e-15 84.7 78 57.7
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 5.9e-14 81.3 54 70.4
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 1.7e-13 79.7 77 58.4
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 1.7e-13 79.7 75 60.0
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 1.7e-13 79.7 76 59.2
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 2.2e-13 79.3 127 40.9
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 3.8e-13 78.6 75 57.3
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 8.5e-13 77.4 64 65.6
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 1.1e-12 77.0 61 70.5
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 1.5e-12 76.6 88 51.1
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 8.0e-11 70.9 61 50.8
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 1.4e-10 70.1 79 49.4
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 1.8e-10 69.7 46 71.7
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.7e-08 63.2 39 74.4
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.7e-08 63.2 39 74.4


User provided reference genes

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