Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 2.3e-61 238.8 126 100.0
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 9.0e-18 94.0 117 51.3
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 6.4e-16 87.8 112 50.9
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 7.1e-15 84.3 115 48.7
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 7.1e-15 84.3 115 48.7
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 9.3e-15 84.0 110 51.8
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 2.1e-14 82.8 117 50.4
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 3.5e-14 82.0 112 49.1
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 7.9e-14 80.9 74 62.2
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 7.9e-14 80.9 114 50.9
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.3e-13 80.1 115 46.1
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.3e-13 80.1 111 51.4
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 1.3e-13 80.1 115 45.2
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 3.9e-13 78.6 110 52.7
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 3.9e-13 78.6 110 52.7
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 5.1e-13 78.2 114 48.2
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 6.6e-13 77.8 74 62.2
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 8.7e-13 77.4 110 50.9
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 1.1e-12 77.0 109 47.7
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 1.1e-12 77.0 76 60.5
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 1.1e-12 77.0 111 48.6
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 1.5e-12 76.6 115 48.7
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 1.5e-12 76.6 76 61.8
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 1.5e-12 76.6 117 46.2
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 1.5e-12 76.6 79 63.3
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 1.9e-12 76.3 110 47.3
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 1.9e-12 76.3 117 44.4
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 1.9e-12 76.3 76 63.2
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 3.3e-12 75.5 80 57.5
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 7.4e-12 74.3 75 60.0
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 7.4e-12 74.3 113 47.8
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 9.6e-12 73.9 113 47.8
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 9.6e-12 73.9 113 47.8
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 9.6e-12 73.9 75 61.3
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 9.6e-12 73.9 75 61.3
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 1.3e-11 73.6 108 49.1
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.3e-11 73.6 82 57.3
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 1.6e-11 73.2 76 57.9
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 1.6e-11 73.2 75 60.0
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.6e-11 73.2 113 46.9
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 1.6e-11 73.2 76 59.2
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 2.1e-11 72.8 76 57.9
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 2.1e-11 72.8 75 54.7
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 4.8e-11 71.6 75 64.0
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 4.8e-11 71.6 75 58.7
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 4.8e-11 71.6 77 57.1
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 6.2e-11 71.2 76 59.2
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 8.1e-11 70.9 73 57.5
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 8.1e-11 70.9 73 57.5
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 8.1e-11 70.9 73 57.5
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 8.1e-11 70.9 73 57.5
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 8.1e-11 70.9 109 47.7
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 1.1e-10 70.5 113 46.0
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 1.1e-10 70.5 115 44.3
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 1.1e-10 70.5 114 47.4
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 1.4e-10 70.1 75 62.7
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 1.4e-10 70.1 109 46.8
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 1.8e-10 69.7 75 62.7
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 1.8e-10 69.7 114 48.2
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 1.8e-10 69.7 113 46.0
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 1.8e-10 69.7 75 64.0
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 1.8e-10 69.7 75 58.7
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 1.8e-10 69.7 113 45.1
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 1.8e-10 69.7 74 59.5
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 2.4e-10 69.3 115 46.1
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 3.1e-10 68.9 81 54.3
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 4.0e-10 68.6 75 57.3
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 4.0e-10 68.6 112 43.8
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 4.0e-10 68.6 74 59.5
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 5.3e-10 68.2 113 46.9
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 5.3e-10 68.2 75 57.3
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 6.9e-10 67.8 117 43.6
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 9.0e-10 67.4 75 60.0
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 1.5e-09 66.6 117 43.6
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.5e-09 66.6 111 42.3
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 2.6e-09 65.9 54 70.4
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 2.6e-09 65.9 75 58.7
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 2.6e-09 65.9 113 46.9
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 2.6e-09 65.9 113 46.9
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 2.6e-09 65.9 111 45.0
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 3.4e-09 65.5 76 61.8
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 3.4e-09 65.5 52 69.2
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 3.4e-09 65.5 52 69.2
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 3.4e-09 65.5 52 69.2
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 3.4e-09 65.5 75 57.3
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 4.5e-09 65.1 75 61.3
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 4.5e-09 65.1 75 61.3
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 4.5e-09 65.1 75 61.3
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 4.5e-09 65.1 75 61.3
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 7.6e-09 64.3 74 52.7
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 9.9e-09 63.9 75 56.0
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 9.9e-09 63.9 70 54.3
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.3e-08 63.5 74 55.4
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 1.3e-08 63.5 75 57.3
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 1.3e-08 63.5 75 57.3
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 1.7e-08 63.2 120 45.8
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 1.7e-08 63.2 118 43.2
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 2.2e-08 62.8 116 42.2
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 4.9e-08 61.6 49 77.6
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 4.9e-08 61.6 120 45.0
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 6.4e-08 61.2 117 42.7
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 8.4e-08 60.8 120 45.0
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 8.4e-08 60.8 119 45.4
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 1.1e-07 60.5 74 52.7
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 1.1e-07 60.5 75 50.7
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 1.4e-07 60.1 69 56.5
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 1.4e-07 60.1 75 57.3
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 4.2e-07 58.5 116 44.0
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 7.1e-07 57.8 48 66.7
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 1.2e-06 57.0 43 76.7
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.2e-06 57.0 48 70.8
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 1.2e-06 57.0 114 45.6
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 2.7e-06 55.8 49 63.3
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 3.5e-06 55.5 45 68.9


User provided reference genes

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