Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010032 Vanilla planifolia HOM05D004068 ORTHO05D004700 2.1e-140 502.3 246 100.0
Peaxi162Scf00919g00026 Petunia axillaris HOM05D004068 ORTHO05D004700 1.2e-69 267.3 158 74.7
MSTRG.18070 Avicennia marina HOM05D004068 ORTHO05D004700 2.0e-69 266.5 153 75.8
Nn3g21863 Nelumbo nucifera HOM05D004068 ORTHO05D004700 2.0e-69 266.5 173 69.9
Solyc01g068030.3 Solanum lycopersicum HOM05D004068 ORTHO05D004700 2.0e-69 266.5 237 56.1
Nitab4.5_0004218g0050 Nicotiana tabacum HOM05D004068 ORTHO05D004700 4.4e-69 265.4 158 74.1
Duzib138G0863 Durio zibethinus HOM05D004068 ORTHO05D004700 7.5e-69 264.6 159 74.8
Gorai.007G119900 Gossypium raimondii HOM05D004068 ORTHO05D004700 1.3e-68 263.8 159 74.8
COL.COLO4_23168 Corchorus olitorius HOM05D004068 ORTHO05D004700 1.7e-68 263.5 160 74.4
CAN.G100.22 Capsicum annuum HOM05D004068 ORTHO05D004700 2.2e-68 263.1 158 73.4
Cfa004871 Carpinus fangiana HOM05D004068 ORTHO05D004700 2.2e-68 263.1 160 73.1
GSVIVG01028194001 Vitis vinifera HOM05D004068 ORTHO05D004700 2.2e-68 263.1 161 72.7
Actinidia21362 Actinidia chinensis HOM05D004068 ORTHO05D004700 2.8e-68 262.7 220 57.7
Rhsim13G0001400 Rhododendron simsii HOM05D004068 ORTHO05D004700 2.8e-68 262.7 216 57.9
Actinidia06383 Actinidia chinensis HOM05D004068 ORTHO05D004700 4.9e-68 261.9 178 67.4
Eucgr.H00894 Eucalyptus grandis HOM05D004068 ORTHO05D004700 6.3e-68 261.5 207 62.8
Prupe.3G006200 Prunus persica HOM05D004068 ORTHO05D004700 6.3e-68 261.5 162 71.0
PGSC0003DMG400005200 Solanum tuberosum HOM05D004068 ORTHO05D004700 6.3e-68 261.5 237 54.9
Sopen01g029950 Solanum pennellii HOM05D004068 ORTHO05D004700 1.1e-67 260.8 237 55.3
Glyma.10G009700 Glycine max HOM05D004068 ORTHO05D004700 1.4e-67 260.4 162 72.2
Nitab4.5_0000222g0260 Nicotiana tabacum HOM05D004068 ORTHO05D004700 1.4e-67 260.4 158 73.4
Thecc.01G321500 Theobroma cacao HOM05D004068 ORTHO05D004700 4.1e-67 258.8 159 73.0
Ciclev10022090m.g Citrus clementina HOM05D004068 ORTHO05D004700 5.4e-67 258.5 167 70.7
Glyma.02G009000 Glycine max HOM05D004068 ORTHO05D004700 5.4e-67 258.5 166 69.9
PGR083G2849 Punica granatum HOM05D004068 ORTHO05D004700 5.4e-67 258.5 158 71.5
Solyc01g068020.4 Solanum lycopersicum HOM05D004068 ORTHO05D004700 7.0e-67 258.1 243 54.3
Zm00001eb131060 Zea mays HOM05D004068 ORTHO05D004700 7.0e-67 258.1 210 60.0
Manes.05G011200 Manihot esculenta HOM05D004068 ORTHO05D004700 1.2e-66 257.3 178 68.0
Medtr1g086340 Medicago truncatula HOM05D004068 ORTHO05D004700 1.2e-66 257.3 227 56.4
RcHm_v2.0_Chr3g0486891 Rosa chinensis HOM05D004068 ORTHO05D004700 1.2e-66 257.3 163 71.2
Sopen01g029940 Solanum pennellii HOM05D004068 ORTHO05D004700 2.0e-66 256.5 236 54.7
MELO3C023625.2 Cucumis melo HOM05D004068 ORTHO05D004700 7.7e-66 254.6 163 69.9
CSS0008406 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 1.0e-65 254.2 152 72.4
MD09G1287000 Malus domestica HOM05D004068 ORTHO05D004700 1.3e-65 253.8 167 68.3
SalBow6G1478 Salvia bowleyana HOM05D004068 ORTHO05D004700 1.7e-65 253.4 153 73.2
EL10As5g23587 Beta vulgaris HOM05D004068 ORTHO05D004700 2.3e-65 253.1 231 57.6
Migut.D00035 Erythranthe guttata HOM05D004068 ORTHO05D004700 3.8e-65 252.3 178 64.6
CANSAT54G1466 Cannabis sativa HOM05D004068 ORTHO05D004700 5.0e-65 251.9 223 56.5
CsaV3_7G030310 Cucumis sativus L. HOM05D004068 ORTHO05D004700 8.6e-65 251.1 160 70.6
Lalb_Chr06g0167051 Lupinus albus HOM05D004068 ORTHO05D004700 8.6e-65 251.1 223 56.5
PSO170G5617 Papaver somniferum HOM05D004068 ORTHO05D004700 8.6e-65 251.1 163 67.5
PSO357G0073 Papaver somniferum HOM05D004068 ORTHO05D004700 1.9e-64 250.0 163 67.5
Sed0027961 Sechium edule HOM05D004068 ORTHO05D004700 1.9e-64 250.0 186 63.4
FAN23G3049 Fragaria x ananassa HOM05D004068 ORTHO05D004700 2.5e-64 249.6 161 70.2
TWI14G0788 Tripterygium wilfordii HOM05D004068 ORTHO05D004700 4.3e-64 248.8 151 73.5
Cc01_g21940 Coffea canephora HOM05D004068 ORTHO05D004700 7.3e-64 248.1 159 69.2
Gohir.D11G111800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 7.3e-64 248.1 144 76.4
PGR083G1259 Punica granatum HOM05D004068 ORTHO05D004700 9.5e-64 247.7 155 69.7
SGA_v2.0_scaffold417G51268 Striga asiatica HOM05D004068 ORTHO05D004700 9.5e-64 247.7 233 54.1
HanXRQChr16g0512461 Helianthus annuus HOM05D004068 ORTHO05D004700 2.1e-63 246.5 159 70.4
TAR633G0425 Trochodendron aralioides HOM05D004068 ORTHO05D004700 2.1e-63 246.5 184 60.9
CiPaw.07G122600 Carya illinoinensis HOM05D004068 ORTHO05D004700 3.6e-63 245.7 185 60.0
unitig_90.g27445 Utricularia gibba HOM05D004068 ORTHO05D004700 6.1e-63 245.0 161 68.3
AUR62024574 Chenopodium quinoa HOM05D004068 ORTHO05D004700 3.0e-62 242.7 191 62.8
ECA236G4612 Erigeron canadensis HOM05D004068 ORTHO05D004700 3.0e-62 242.7 224 56.2
Gohir.A07G130200 Gossypium hirsutum HOM05D004068 ORTHO05D004700 3.0e-62 242.7 159 66.0
Gorai.001G146300 Gossypium raimondii HOM05D004068 ORTHO05D004700 6.8e-62 241.5 159 65.4
FAN28G2449 Fragaria x ananassa HOM05D004068 ORTHO05D004700 8.9e-62 241.1 185 61.6
Sed0019105 Sechium edule HOM05D004068 ORTHO05D004700 1.2e-61 240.7 149 71.1
CARHR001800 Cardamine hirsuta HOM05D004068 ORTHO05D004700 2.0e-61 240.0 167 63.5
Gohir.D07G134600 Gossypium hirsutum HOM05D004068 ORTHO05D004700 2.0e-61 240.0 159 64.8
Aqoxy2G02578 Aquilegia oxysepala HOM05D004068 ORTHO05D004700 7.5e-61 238.0 142 76.1
Potri.002G190300 Populus trichocarpa HOM05D004068 ORTHO05D004700 3.7e-60 235.7 161 66.5
HPP92_015252 Vanilla planifolia HOM05D004068 ORTHO05D004700 6.4e-60 235.0 116 97.4
AL1G11820 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 1.8e-59 233.4 168 61.9
Hma1.2p1_0484F.1_g162840 Hydrangea macrophylla HOM05D004068 ORTHO05D004700 1.8e-59 233.4 162 64.8
Carub.0001s0155 Capsella rubella HOM05D004068 ORTHO05D004700 2.4e-59 233.0 167 61.1
FAN26G1054 Fragaria x ananassa HOM05D004068 ORTHO05D004700 3.2e-59 232.6 216 53.7
HanXRQChr06g0168031 Helianthus annuus HOM05D004068 ORTHO05D004700 7.0e-59 231.5 162 64.8
TAR636G1362 Trochodendron aralioides HOM05D004068 ORTHO05D004700 9.2e-59 231.1 200 56.0
AT1G02475 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 1.6e-58 230.3 162 63.0
C05p01270 Brassica napus HOM05D004068 ORTHO05D004700 1.6e-58 230.3 158 65.2
Potri.014G115400 Populus trichocarpa HOM05D004068 ORTHO05D004700 2.0e-58 229.9 161 64.6
A10p01270 Brassica napus HOM05D004068 ORTHO05D004700 4.6e-58 228.8 144 70.1
Lsat_1_v5_gn_8_167400 Lactuca sativa HOM05D004068 ORTHO05D004700 4.6e-58 228.8 138 73.9
Thhalv10008722m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 1.3e-57 227.3 168 61.9
Atru.chr5.916 Acer truncatum HOM05D004068 ORTHO05D004700 5.0e-57 225.3 229 51.1
CAN.G100.23 Capsicum annuum HOM05D004068 ORTHO05D004700 6.6e-57 224.9 141 69.5
Sp1g01550 Schrenkiella parvula HOM05D004068 ORTHO05D004700 6.6e-57 224.9 151 66.2
Haze_05111 Corylus avellana HOM05D004068 ORTHO05D004700 8.6e-57 224.6 135 72.6
QL12p034273 Quercus lobata HOM05D004068 ORTHO05D004700 5.6e-56 221.9 164 61.6
AUR62011741 Chenopodium quinoa HOM05D004068 ORTHO05D004700 9.5e-56 221.1 245 49.8
BcaB03g15774 Brassica carinata HOM05D004068 ORTHO05D004700 1.6e-55 220.3 170 61.2
CDE02G2955 Ceratophyllum demersum HOM05D000037 ORTHO05D001684 1.6e-55 220.3 177 59.9
THA.LOC104801318 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 1.6e-55 220.3 163 63.2
Aa31LG1G10110 Aethionema arabicum HOM05D004068 ORTHO05D004700 2.8e-55 219.5 181 56.9
MBI19_g32706_MAGBIO Magnolia biondii HOM05D004068 ORTHO05D004700 3.6e-55 219.2 175 59.4
FvH4_1g26710 Fragaria vesca HOM05D004068 ORTHO05D004700 6.2e-55 218.4 147 66.7
FAN19G0978 Fragaria x ananassa HOM05D004068 ORTHO05D004700 2.3e-54 216.5 217 50.7
SEGI_19128 Sequoiadendron giganteum HOM05D004068 ORTHO05D004700 5.2e-54 215.3 159 61.6
Hund09678 Selenicereus undatus HOM05D004068 ORTHO05D004700 8.9e-54 214.5 128 73.4
BraA10t42405Z Brassica rapa HOM05D004068 ORTHO05D004700 3.7e-52 209.1 159 61.0
Carub.0006s3535 Capsella rubella HOM05D004068 ORTHO05D004700 8.3e-52 208.0 167 54.5
Sp6g01730 Schrenkiella parvula HOM05D004068 ORTHO05D004700 1.4e-51 207.2 163 56.4
CiPaw.08G084800 Carya illinoinensis HOM05D004068 ORTHO05D004700 2.4e-51 206.5 144 64.6
AT4G01883 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 5.4e-51 205.3 150 59.3
Thhalv10028926m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 5.4e-51 205.3 163 55.8
Thhalv10028927m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 5.4e-51 205.3 163 55.8
THA.LOC104801319 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 5.4e-51 205.3 199 49.2
BcaB01g02105 Brassica carinata HOM05D004068 ORTHO05D004700 9.2e-51 204.5 163 55.8
Duzib211G0484 Durio zibethinus HOM05D004068 ORTHO05D004700 1.2e-50 204.1 122 73.0
BolC5t28909H Brassica oleracea HOM05D004068 ORTHO05D004700 2.3e-49 199.9 148 62.8
Lj1A11T70 Lonicera japonica HOM05D004068 ORTHO05D004700 3.0e-49 199.5 178 56.7
AL6G51410 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 3.9e-49 199.1 153 58.2
ATR0693G403 Amborella trichopoda HOM05D004068 ORTHO05D004700 1.5e-48 197.2 139 63.3
BcaC04g24068 Brassica carinata HOM05D004068 ORTHO05D004700 3.3e-48 196.1 150 59.3
Mapoly0066s0015 Marchantia polymorpha HOM05D004068 ORTHO05D004700 3.3e-48 196.1 150 56.0
AL1G11810 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 4.3e-48 195.7 150 54.7
AT1G02470 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 5.6e-48 195.3 150 53.3
CARHR001790 Cardamine hirsuta HOM05D004068 ORTHO05D004700 7.3e-48 194.9 160 51.9
Cpa.g.sc67.88 Carica papaya HOM05D004068 ORTHO05D004700 2.8e-47 193.0 121 68.6
BcaC07g42396 Brassica carinata HOM05D004068 ORTHO05D004700 8.1e-47 191.4 134 64.2
Sabra14G0085500 Salix brachista HOM05D004068 ORTHO05D004700 1.8e-46 190.3 197 48.2
Pp3c26_7940 Physcomitrium patens HOM05D004068 ORTHO05D004700 2.3e-46 189.9 142 57.7
C09p01400 Brassica napus HOM05D004068 ORTHO05D004700 4.0e-46 189.1 152 57.9
Carub.0001s0154 Capsella rubella HOM05D004068 ORTHO05D004700 4.0e-46 189.1 219 40.6
Sc17g0000200 Simmondsia chinensis HOM05D004068 ORTHO05D004700 6.8e-46 188.3 108 72.2
BolC9t53073H Brassica oleracea HOM05D004068 ORTHO05D004700 2.0e-45 186.8 158 55.7
AagrBONN_evm.TU.Sc2ySwM_228.3301 Anthoceros agrestis HOM05D004068 ORTHO05D004700 3.4e-45 186.0 142 55.6
Sp1g01540 Schrenkiella parvula HOM05D004068 ORTHO05D004700 9.8e-45 184.5 144 52.8
SMO134G0067 Selaginella moellendorffii HOM05D004068 ORTHO05D004700 9.8e-45 184.5 136 60.3
THA.LOC104801317 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 9.8e-45 184.5 219 43.8
Thhalv10008621m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 8.3e-44 181.4 144 51.4
A09p68650 Brassica napus HOM05D004068 ORTHO05D004700 1.2e-42 177.6 239 38.5
BraA09t42208Z Brassica rapa HOM05D004068 ORTHO05D004700 1.2e-42 177.6 239 38.5
Aa31LG1G10100 Aethionema arabicum HOM05D004068 ORTHO05D004700 1.6e-42 177.2 162 45.1
BcaC07g42395 Brassica carinata HOM05D004068 ORTHO05D004700 1.6e-42 177.2 144 50.7
BolC8t52840H Brassica oleracea HOM05D004068 ORTHO05D004700 1.6e-42 177.2 144 50.7
Pp3c9_13510 Physcomitrium patens HOM05D004068 ORTHO05D004700 2.1e-42 176.8 145 51.7
ClCG09G004770 Citrullus lanatus HOM05D004068 ORTHO05D004700 7.8e-42 174.9 176 52.3
Gohir.A11G106800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 1.3e-41 174.1 163 54.6
A10p01260 Brassica napus HOM05D004068 ORTHO05D004700 1.7e-41 173.7 144 49.3
BraA10t42404Z Brassica rapa HOM05D004068 ORTHO05D004700 1.7e-41 173.7 144 49.3
VMungo0720G2238 Vigna mungo HOM05D004068 ORTHO05D004700 1.7e-41 173.7 166 51.8
C05p01260 Brassica napus HOM05D004068 ORTHO05D004700 2.3e-41 173.3 144 49.3
DCAR_018255 Daucus carota HOM05D004068 ORTHO05D004700 6.8e-38 161.8 96 71.9
C08p53250 Brassica napus HOM05D004068 ORTHO05D004700 4.4e-37 159.1 228 37.3
Sabra02G0165200 Salix brachista HOM05D004068 ORTHO05D004700 5.8e-37 158.7 175 50.9
MD17G1279300 Malus domestica HOM05D004068 ORTHO05D004700 7.6e-37 158.3 106 64.2
CBR_g29411 Chara braunii HOM05D004068 ORTHO05D004700 9.9e-37 157.9 119 56.3
CSS0047755 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 2.2e-36 156.8 143 53.1
CSS0031477 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 6.4e-36 155.2 128 54.7
CARHR249850 Cardamine hirsuta HOM05D004068 ORTHO05D004700 1.9e-32 143.7 95 64.2
Cre14.g616250 Chlamydomonas reinhardtii HOM05D004068 ORTHO05D004700 7.3e-32 141.7 145 44.1
Phvul.007G211200 Phaseolus vulgaris HOM05D004068 ORTHO05D004700 4.7e-31 139.0 172 47.1
MCO03G258 Micromonas commoda HOM05D004068 ORTHO05D004700 4.9e-28 129.0 141 39.7
arahy.Tifrunner.gnm1.ann1.20WW32 Arachis hypogaea HOM05D004068 ORTHO05D004700 1.4e-27 127.5 152 45.4
Ah.02g112620 Amaranthus hybridus HOM05D004068 ORTHO05D004700 2.4e-27 126.7 150 47.3
PRCOL_00002997 Prasinoderma coloniale HOM05D004068 ORTHO05D004700 2.4e-27 126.7 145 40.7
Lj5g0018153 Lotus japonicus HOM05D004068 ORTHO05D004700 3.2e-27 126.3 85 62.4
Psat6g159440 Pisum sativum HOM05D004068 ORTHO05D004700 9.3e-27 124.8 146 45.9
Ca_10252_v3 Cicer arietinum L. HOM05D004068 ORTHO05D004700 1.2e-26 124.4 163 42.9
Dinv12104 Davidia involucrata HOM05D004068 ORTHO05D004700 2.1e-26 123.6 64 81.2
arahy.Tifrunner.gnm1.ann1.G5UTBZ Arachis hypogaea HOM05D004068 ORTHO05D004700 1.3e-25 120.9 147 44.9
Aa31LG5G1470 Aethionema arabicum HOM05D004068 ORTHO05D004700 2.6e-21 106.7 110 48.2
BraA09t35801Z Brassica rapa HOM05D004068 ORTHO05D004700 1.7e-20 104.0 73 61.6
TPR.G3089 Trifolium pratense HOM05D004068 ORTHO05D004700 2.2e-20 103.6 68 63.2
vmacro09333 Vaccinium macrocarpon HOM05D004068 ORTHO05D004700 3.8e-20 102.8 63 66.7
TPR.G3034 Trifolium pratense HOM05D004068 ORTHO05D004700 3.5e-18 96.3 57 77.2
CAN.G257.121 Capsicum annuum HOM05D004068 ORTHO05D004700 5.1e-17 92.4 68 57.4
Glyma.19G225300 Glycine max HOM05D004068 ORTHO05D004700 4.5e-13 79.3 85 47.1
Oeu052569.2 Olea europaea HOM05D004068 ORTHO05D004700 5.8e-13 79.0 47 68.1
Os01g0328600 Oryza sativa ssp. japonica HOM05D004068 ORTHO05D004700 5.8e-13 79.0 46 73.9
Oeu044746.1 Olea europaea HOM05D004068 ORTHO05D004700 1.1e-08 64.7 43 58.1
BcaC03g18203 Brassica carinata HOM05D004068 ORTHO05D004700 6.2e-07 58.9 50 54.0
A02p42700 Brassica napus HOM05D004068 ORTHO05D004700 1.1e-06 58.2 48 54.2
C02p62690 Brassica napus HOM05D004068 ORTHO05D004700 1.1e-06 58.2 48 54.2


User provided reference genes

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