Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_010017 Vanilla planifolia HOM05D000187 ORTHO05D000230 9.9e-297 1022.7 518 100.0
HPP92_015282 Vanilla planifolia HOM05D000187 ORTHO05D000230 1.6e-246 855.9 509 88.2
HPP92_027890 Vanilla planifolia HOM05D000187 ORTHO05D000230 8.2e-126 454.9 418 60.0
MBI19_g14802_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000230 6.2e-41 172.9 496 32.9
Aqoxy6G01277 Aquilegia oxysepala HOM05D000187 ORTHO05D000230 9.7e-34 149.1 482 32.6
TAR381G0132 Trochodendron aralioides HOM05D000187 ORTHO05D000230 7.2e-29 132.9 488 29.9
Nn1g04799 Nelumbo nucifera HOM05D000187 ORTHO05D000230 3.6e-28 130.6 482 31.5
Dinv35939 Davidia involucrata HOM05D000187 ORTHO05D000230 7.9e-28 129.4 479 29.2
TAR628G0833 Trochodendron aralioides HOM05D000187 ORTHO05D000230 2.3e-27 127.9 500 30.0
CSS0010742 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 2.5e-26 124.4 517 31.1
Potri.002G124300 Populus trichocarpa HOM05D000187 ORTHO05D000230 5.7e-26 123.2 477 30.2
TAR376G0642 Trochodendron aralioides HOM05D000187 ORTHO05D000230 2.2e-25 121.3 502 27.7
PSO210G7164 Papaver somniferum HOM05D000187 ORTHO05D000230 1.8e-24 118.2 496 30.0
TAR625G0353 Trochodendron aralioides HOM05D000187 ORTHO05D000230 1.8e-24 118.2 509 28.9
Manes.18G039900 Manihot esculenta HOM05D000187 ORTHO05D000230 2.4e-24 117.9 477 32.1
PSO170G6274 Papaver somniferum HOM05D000187 ORTHO05D000230 2.4e-24 117.9 496 30.2
Sabra02G0097600 Salix brachista HOM05D000187 ORTHO05D000230 4.1e-24 117.1 487 30.0
Manes.18G039700 Manihot esculenta HOM05D000187 ORTHO05D000230 1.2e-23 115.5 470 31.5
HPP92_017323 Vanilla planifolia HOM05D000187 ORTHO05D000230 1.3e-22 112.1 461 29.3
FAN27G0573 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.7e-22 111.7 485 28.0
Cpa.g.sc21.175 Carica papaya HOM05D000187 ORTHO05D000230 1.1e-21 109.0 488 30.5
Cfa018070 Carpinus fangiana HOM05D000187 ORTHO05D000230 1.1e-21 109.0 481 29.5
ATR0800G045 Amborella trichopoda HOM05D000187 ORTHO05D000230 1.4e-21 108.6 489 29.0
FvH4_2g34090 Fragaria vesca HOM05D000187 ORTHO05D000230 3.2e-21 107.5 488 28.5
FAN15G1912 Fragaria x ananassa HOM05D000187 ORTHO05D000230 3.2e-21 107.5 485 27.4
FAN20G2802 Fragaria x ananassa HOM05D000187 ORTHO05D000230 4.2e-21 107.1 493 28.2
Oeu021388.1 Olea europaea HOM05D000187 ORTHO05D000230 1.6e-20 105.1 511 26.8
Hma1.2p1_1072F.1_g254190 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 2.1e-20 104.8 328 30.2
RcHm_v2.0_Chr6g0308261 Rosa chinensis HOM05D000187 ORTHO05D000230 2.1e-20 104.8 484 27.3
Haze_18037 Corylus avellana HOM05D000187 ORTHO05D000230 2.7e-20 104.4 481 28.7
AUR62042727 Chenopodium quinoa HOM05D000187 ORTHO05D000230 3.6e-20 104.0 498 27.9
Glyma.06G041000 Glycine max HOM05D000187 ORTHO05D000230 3.6e-20 104.0 486 28.2
Peaxi162Scf00503g00314 Petunia axillaris HOM05D000187 ORTHO05D000230 3.6e-20 104.0 501 29.1
arahy.Tifrunner.gnm1.ann1.81V7JE Arachis hypogaea HOM05D000187 ORTHO05D000230 6.1e-20 103.2 507 27.6
arahy.Tifrunner.gnm1.ann1.S0CDCC Arachis hypogaea HOM05D000187 ORTHO05D000230 6.1e-20 103.2 507 27.6
FAN24G2489 Fragaria x ananassa HOM05D000187 ORTHO05D000230 7.9e-20 102.8 489 28.4
Lj9C355G13 Lonicera japonica HOM05D000187 ORTHO05D000230 7.9e-20 102.8 490 28.0
Hund23937 Selenicereus undatus HOM05D000187 ORTHO05D000230 1.0e-19 102.4 519 26.8
MD08G1097400 Malus domestica HOM05D000187 ORTHO05D000230 1.4e-19 102.1 490 29.8
QL02p004379 Quercus lobata HOM05D000187 ORTHO05D000230 1.4e-19 102.1 483 28.0
Atru.chr5.2655 Acer truncatum HOM05D000187 ORTHO05D000230 1.8e-19 101.7 495 28.5
COL.COLO4_26547 Corchorus olitorius HOM05D000187 ORTHO05D000230 3.0e-19 100.9 501 27.3
Lalb_Chr23g0267101 Lupinus albus HOM05D000187 ORTHO05D000230 3.0e-19 100.9 481 27.4
Hma1.2p1_0360F.1_g135710 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 3.9e-19 100.5 437 27.7
Atru.chr13.725 Acer truncatum HOM05D000187 ORTHO05D000230 6.7e-19 99.8 472 29.2
AUR62038831 Chenopodium quinoa HOM05D000187 ORTHO05D000230 6.7e-19 99.8 500 27.8
Nitab4.5_0006769g0060 Nicotiana tabacum HOM05D000187 ORTHO05D000230 6.7e-19 99.8 511 28.0
Lj1g0026591 Lotus japonicus HOM05D000187 ORTHO05D000230 1.5e-18 98.6 479 27.8
MD15G1079700 Malus domestica HOM05D000187 ORTHO05D000230 1.5e-18 98.6 486 29.2
CiPaw.15G054500 Carya illinoinensis HOM05D000187 ORTHO05D000230 2.6e-18 97.8 479 28.2
Nitab4.5_0000287g0070 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.6e-18 97.8 500 27.6
Phvul.009G066000 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 2.6e-18 97.8 484 26.7
QL11p034968 Quercus lobata HOM05D000187 ORTHO05D000230 2.6e-18 97.8 498 27.7
Glyma.04G039800 Glycine max HOM05D000187 ORTHO05D000230 4.4e-18 97.1 483 28.4
VMungo1309G2085 Vigna mungo HOM05D000187 ORTHO05D000230 4.4e-18 97.1 479 28.2
EL10As7g23754 Beta vulgaris HOM05D000187 ORTHO05D000230 7.4e-18 96.3 516 28.9
MSTRG.24354 Avicennia marina HOM05D000187 ORTHO05D000230 9.7e-18 95.9 510 27.6
Solyc04g078680.4 Solanum lycopersicum HOM05D000187 ORTHO05D000230 9.7e-18 95.9 493 27.6
Sopen04g032280 Solanum pennellii HOM05D000187 ORTHO05D000230 1.7e-17 95.1 493 27.8
Dinv39290 Davidia involucrata HOM05D000187 ORTHO05D000230 2.2e-17 94.7 452 29.2
Prupe.1G432700 Prunus persica HOM05D000187 ORTHO05D000230 2.8e-17 94.4 498 28.9
Duzib093G1398 Durio zibethinus HOM05D000187 ORTHO05D000230 4.8e-17 93.6 502 28.7
Os04g0648800 Oryza sativa ssp. japonica HOM05D000187 ORTHO05D000230 4.8e-17 93.6 479 28.2
Sc02g0007280 Simmondsia chinensis HOM05D000187 ORTHO05D000230 4.8e-17 93.6 511 26.8
PGSC0003DMG400007954 Solanum tuberosum HOM05D000187 ORTHO05D000230 4.8e-17 93.6 496 27.4
Ah.11g042940 Amaranthus hybridus HOM05D000187 ORTHO05D000230 6.3e-17 93.2 507 28.2
Lj4C61T9 Lonicera japonica HOM05D000187 ORTHO05D000230 6.3e-17 93.2 476 28.4
Ciclev10027894m.g Citrus clementina HOM05D000187 ORTHO05D000230 8.2e-17 92.8 500 28.4
Zm00001eb432070 Zea mays HOM05D000187 ORTHO05D000230 1.4e-16 92.0 495 29.5
CANSAT25G2996 Cannabis sativa HOM05D000187 ORTHO05D000230 1.8e-16 91.7 486 29.2
Lj4C769G12 Lonicera japonica HOM05D000187 ORTHO05D000230 2.4e-16 91.3 460 27.8
Oeu057264.1 Olea europaea HOM05D000187 ORTHO05D000230 2.4e-16 91.3 478 28.0
Duzib041G0535 Durio zibethinus HOM05D000187 ORTHO05D000230 9.1e-16 89.4 465 28.4
Zm00001eb068540 Zea mays HOM05D000187 ORTHO05D000230 9.1e-16 89.4 491 29.1
ClCG08G016100 Citrullus lanatus HOM05D000187 ORTHO05D000230 1.2e-15 89.0 490 28.8
Sc15g0005980 Simmondsia chinensis HOM05D000187 ORTHO05D000230 1.2e-15 89.0 475 28.8
Lalb_Chr14g0368591 Lupinus albus HOM05D000187 ORTHO05D000230 2.0e-15 88.2 486 28.8
TPR.G3771 Trifolium pratense HOM05D000187 ORTHO05D000230 2.0e-15 88.2 478 28.5
MELO3C010842.2 Cucumis melo HOM05D000187 ORTHO05D000230 3.4e-15 87.4 483 27.7
Rhsim06G0052700 Rhododendron simsii HOM05D000187 ORTHO05D000230 3.4e-15 87.4 493 28.2
Thecc.08G003700 Theobroma cacao HOM05D000187 ORTHO05D000230 3.4e-15 87.4 458 28.4
Potri.009G100100 Populus trichocarpa HOM05D000187 ORTHO05D000230 4.5e-15 87.0 484 26.0
Nitab4.5_0001396g0010 Nicotiana tabacum HOM05D000187 ORTHO05D000230 5.9e-15 86.7 480 25.6
Rhsim05G0086400 Rhododendron simsii HOM05D000187 ORTHO05D000230 5.9e-15 86.7 495 28.1
Duzib116G0443 Durio zibethinus HOM05D000187 ORTHO05D000230 7.7e-15 86.3 469 28.8
TWI36G1439 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 7.7e-15 86.3 475 26.3
Ca_13282_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000230 1.0e-14 85.9 476 27.3
Gohir.A05G204100 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.0e-14 85.9 485 29.7
Medtr1g019200 Medicago truncatula HOM05D000187 ORTHO05D000230 1.7e-14 85.1 487 26.9
CsaV3_2G026530 Cucumis sativus L. HOM05D000187 ORTHO05D000230 2.2e-14 84.7 483 27.5
Lj9C357G3 Lonicera japonica HOM05D000187 ORTHO05D000230 2.2e-14 84.7 472 27.5
Oeu049993.1 Olea europaea HOM05D000187 ORTHO05D000230 2.9e-14 84.3 478 25.7
Glyma.17G240800 Glycine max HOM05D000187 ORTHO05D000230 3.8e-14 84.0 502 28.1
vmacro19510 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 3.8e-14 84.0 497 28.2
CiPaw.06G171600 Carya illinoinensis HOM05D000187 ORTHO05D000230 6.5e-14 83.2 460 28.7
VMungo0647G1412 Vigna mungo HOM05D000187 ORTHO05D000230 6.5e-14 83.2 559 27.5
Potri.001G304900 Populus trichocarpa HOM05D000187 ORTHO05D000230 8.5e-14 82.8 480 27.7
Dinv15731 Davidia involucrata HOM05D000187 ORTHO05D000230 1.1e-13 82.4 487 29.2
Cfa004537 Carpinus fangiana HOM05D003014 ORTHO05D003233 1.9e-13 81.6 497 26.4
Oeu012954.1 Olea europaea HOM05D000187 ORTHO05D000230 3.2e-13 80.9 331 28.7
Eucgr.F02323 Eucalyptus grandis HOM05D000187 ORTHO05D000230 4.2e-13 80.5 483 25.5
Gorai.009G213900 Gossypium raimondii HOM05D000187 ORTHO05D000230 4.2e-13 80.5 466 29.0
Actinidia01095 Actinidia chinensis HOM05D000187 ORTHO05D000230 5.5e-13 80.1 488 26.2
Gohir.A03G080912 Gossypium hirsutum HOM05D000187 ORTHO05D000230 5.5e-13 80.1 480 27.9
Lalb_Chr24g0399301 Lupinus albus HOM05D000187 ORTHO05D000230 5.5e-13 80.1 468 27.8
MSTRG.25076 Avicennia marina HOM05D000187 ORTHO05D000230 7.2e-13 79.7 508 24.8
DCAR_008801 Daucus carota HOM05D000187 ORTHO05D000230 7.2e-13 79.7 433 28.6
Actinidia08286 Actinidia chinensis HOM05D000187 ORTHO05D000230 9.4e-13 79.3 469 27.5
CSS0014239 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 1.2e-12 79.0 499 27.7
Actinidia22646 Actinidia chinensis HOM05D000187 ORTHO05D000230 1.6e-12 78.6 490 29.4
Rhsim07G0227200 Rhododendron simsii HOM05D000187 ORTHO05D000230 1.6e-12 78.6 468 26.5
Lalb_Chr08g0245361 Lupinus albus HOM05D000187 ORTHO05D000230 2.7e-12 77.8 473 24.9
Gohir.D02G090901 Gossypium hirsutum HOM05D000187 ORTHO05D000230 3.6e-12 77.4 496 26.4
Sed0014852 Sechium edule HOM05D000187 ORTHO05D000230 3.6e-12 77.4 486 27.4
vmacro04442 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 3.6e-12 77.4 483 26.1
vmacro21501 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 3.6e-12 77.4 497 27.8
CSS0000462 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 4.7e-12 77.0 487 26.1
Duzib248G1643 Durio zibethinus HOM05D000187 ORTHO05D000230 4.7e-12 77.0 521 25.7
Gohir.D05G207300 Gossypium hirsutum HOM05D000187 ORTHO05D000230 8.0e-12 76.3 468 28.2
Phvul.001G023300 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 8.0e-12 76.3 482 27.4
Nitab4.5_0004376g0070 Nicotiana tabacum HOM05D000187 ORTHO05D000230 1.4e-11 75.5 492 26.2
Actinidia17875 Actinidia chinensis HOM05D000015 ORTHO05D000734 2.3e-11 74.7 483 28.0
Gorai.005G101700 Gossypium raimondii HOM05D000187 ORTHO05D000230 3.0e-11 74.3 496 26.2
Lj5g0011958 Lotus japonicus HOM05D000187 ORTHO05D000230 3.0e-11 74.3 483 27.1
Peaxi162Scf01027g00023 Petunia axillaris HOM05D000187 ORTHO05D000230 5.2e-11 73.6 524 26.3
Ciclev10000459m.g Citrus clementina HOM05D000187 ORTHO05D000230 1.1e-10 72.4 470 29.4
TWI75G1870 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 1.5e-10 72.0 465 24.3
CiPaw.05G008000 Carya illinoinensis HOM05D000187 ORTHO05D000230 2.0e-10 71.6 498 25.9
Psat0s2139g0240 Pisum sativum HOM05D000187 ORTHO05D000230 4.4e-10 70.5 492 28.3
Gohir.D06G018500 Gossypium hirsutum HOM05D000187 ORTHO05D000230 5.7e-10 70.1 449 26.9
Lalb_Chr22g0355041 Lupinus albus HOM05D000187 ORTHO05D000230 9.7e-10 69.3 486 28.2
THA.LOC104812568 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 9.7e-10 69.3 468 25.2
SalBow6G5553 Salvia bowleyana HOM05D000187 ORTHO05D000230 1.3e-09 68.9 514 26.5
TWI36G1017 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 2.8e-09 67.8 473 24.5
Cc10_g04640 Coffea canephora HOM05D000187 ORTHO05D000230 8.2e-09 66.2 448 27.2
THA.LOC104814164 Tarenaya hassleriana HOM05D000187 ORTHO05D000230 8.2e-09 66.2 492 25.6
Gorai.010G021500 Gossypium raimondii HOM05D000187 ORTHO05D000230 1.4e-08 65.5 448 25.7
PGR083G0833 Punica granatum HOM05D000187 ORTHO05D000230 2.4e-08 64.7 345 26.4
Gohir.A06G020000 Gossypium hirsutum HOM05D000187 ORTHO05D000230 5.3e-08 63.5 448 25.2
CiPaw.16G040500 Carya illinoinensis HOM05D000187 ORTHO05D000230 1.6e-07 62.0 408 27.9
MSTRG.1069 Avicennia marina HOM05D000187 ORTHO05D000230 2.6e-07 61.2 512 24.4
TWI31G1329 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 2.6e-07 61.2 489 24.5
Sp1g33980 Schrenkiella parvula HOM05D000187 ORTHO05D000230 4.5e-07 60.5 364 25.5
Gohir.D04G161900 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.3e-06 58.9 483 25.3
Gorai.012G149900 Gossypium raimondii HOM05D000187 ORTHO05D000230 1.3e-06 58.9 483 25.3
AL1G52830 Arabidopsis lyrata HOM05D000187 ORTHO05D000230 1.7e-06 58.5 366 24.3


User provided reference genes

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