Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 2.7e-115 418.7 213 100.0
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.0e-57 226.5 215 56.3
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 2.6e-54 216.1 206 55.8
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 4.5e-54 215.3 212 55.2
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 5.9e-54 214.9 208 54.3
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 1.2e-51 207.2 204 53.4
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 8.0e-51 204.5 205 54.1
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.8e-50 203.4 206 53.4
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 4.0e-50 202.2 172 57.0
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 1.5e-49 200.3 210 50.5
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 2.6e-49 199.5 206 51.5
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 3.3e-49 199.1 207 51.2
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 4.8e-48 195.3 156 62.8
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 6.3e-48 194.9 210 51.4
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.3e-45 187.2 204 50.0
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.9e-45 186.0 224 48.2
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 2.9e-45 186.0 185 54.6
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 1.9e-44 183.3 208 49.0
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.5e-44 183.0 209 47.4
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.2e-44 182.6 209 47.8
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 4.7e-43 178.7 211 47.4
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.8e-42 176.8 209 45.9
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.8e-42 176.8 123 63.4
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 8.8e-42 174.5 221 46.6
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 1.5e-41 173.7 156 54.5
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.5e-41 173.7 202 48.5
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.5e-41 173.7 202 48.5
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 1.5e-41 173.7 210 45.7
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 5.7e-41 171.8 142 61.3
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 2.8e-40 169.5 205 44.9
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 7.0e-39 164.9 213 47.4
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 9.1e-39 164.5 132 58.3
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.2e-38 164.1 163 52.1
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 1.1e-36 157.5 202 43.6
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 4.2e-36 155.6 187 47.6
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.6e-35 153.7 188 46.3
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 2.8e-32 142.9 272 36.4
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.4e-31 140.6 205 42.9
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 1.2e-30 137.5 139 48.2
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 3.5e-30 136.0 205 41.5
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 7.7e-30 134.8 194 42.3
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 5.0e-29 132.1 190 40.0
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.9e-28 130.2 161 42.9
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 3.3e-28 129.4 193 41.5
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 3.3e-28 129.4 193 41.5
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 3.3e-28 129.4 193 41.5
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 4.3e-28 129.0 190 39.5
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 7.3e-28 128.3 179 40.2
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 7.3e-28 128.3 247 38.5
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 4.7e-27 125.6 178 42.7
Haze_16205 Corylus avellana HOM05D005772 ORTHO05D006468 2.0e-25 120.2 159 46.5
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.0e-25 120.2 178 39.9
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 2.6e-25 119.8 193 40.4
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 7.5e-25 118.2 198 35.4
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 7.5e-25 118.2 135 49.6
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.3e-24 117.5 181 38.7
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 6.4e-24 115.2 179 41.9
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 8.3e-24 114.8 178 37.6
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 1.4e-23 114.0 211 36.5
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 1.4e-23 114.0 178 37.6
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.8e-23 113.6 199 37.2
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 1.8e-23 113.6 200 34.0
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 2.4e-23 113.2 211 37.4
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 7.0e-23 111.7 178 37.1
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 7.0e-23 111.7 193 36.3
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 9.2e-23 111.3 105 49.5
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 1.2e-22 110.9 183 37.2
FvH4_6g36610 Fragaria vesca HOM05D005772 ORTHO05D006468 1.2e-22 110.9 145 43.4
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 1.6e-22 110.5 193 38.3
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 2.7e-22 109.8 182 38.5
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 3.5e-22 109.4 178 36.5
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 7.8e-22 108.2 196 37.8
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 7.8e-22 108.2 174 38.5
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.0e-21 107.8 202 36.1
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.0e-21 107.8 181 36.5
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.7e-21 107.1 173 35.3
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 1.7e-21 107.1 206 32.5
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 6.6e-21 105.1 178 36.0
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 8.6e-21 104.8 220 33.6
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.5e-20 104.0 184 35.3
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.5e-20 103.2 160 38.8
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 2.5e-20 103.2 214 33.2
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 3.3e-20 102.8 191 34.6
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 3.3e-20 102.8 185 36.8
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 5.6e-20 102.1 164 37.8
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.2e-19 100.9 175 37.7
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 8.0e-19 98.2 240 31.7
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.0e-18 97.8 211 33.6
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 3.1e-18 96.3 203 31.5
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.1e-18 96.3 173 30.6
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 4.0e-18 95.9 195 32.8
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 6.8e-18 95.1 182 35.2
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 1.2e-17 94.4 183 33.3
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.2e-17 94.4 180 33.9
Duzib192G0394 Durio zibethinus HOM05D005772 ORTHO05D006468 3.4e-17 92.8 159 38.4
Atru.chr1.2602 Acer truncatum HOM05D005772 ORTHO05D006468 4.4e-17 92.4 96 52.1
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 4.4e-17 92.4 210 32.9
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 9.8e-17 91.3 173 32.4
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.7e-16 90.5 118 33.9
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 2.2e-16 90.1 201 33.3
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.9e-16 89.7 142 39.4
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 2.9e-16 89.7 139 36.7
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 4.9e-16 89.0 149 38.9
Dinv20324 Davidia involucrata HOM05D005772 ORTHO05D006468 8.3e-16 88.2 217 35.0
Eucgr.A00749 Eucalyptus grandis HOM05D005772 ORTHO05D006468 1.4e-15 87.4 148 38.5
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 2.0e-14 83.6 163 29.4
QL06p047014 Quercus lobata HOM05D001071 ORTHO05D006468 2.7e-14 83.2 104 46.2
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 4.6e-14 82.4 150 34.0
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 6.0e-14 82.0 187 27.8
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 1.7e-13 80.5 174 32.8
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 3.0e-13 79.7 205 29.8
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 3.0e-13 79.7 208 30.3
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 3.9e-13 79.3 187 31.6
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 1.1e-12 77.8 211 28.0
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 4.3e-12 75.9 121 41.3
MD04G1024400 Malus domestica HOM05D005772 ORTHO05D006468 4.3e-12 75.9 107 40.2
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 9.5e-12 74.7 188 27.1
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 3.6e-11 72.8 163 27.6
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 4.7e-11 72.4 179 30.2
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 1.8e-10 70.5 89 32.6
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 4.0e-10 69.3 187 25.7
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.5e-09 67.4 68 42.6
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 9.8e-09 64.7 139 36.7
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 2.2e-08 63.5 152 34.9
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 3.7e-08 62.8 195 27.7
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 3.2e-07 59.7 123 36.6
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 9.2e-07 58.2 65 35.4
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 1.2e-06 57.8 139 25.9
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 2.7e-06 56.6 138 32.6
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 2.7e-06 56.6 140 27.9
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 7.8e-06 55.1 117 35.0


User provided reference genes

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