Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009967 Vanilla planifolia HOM05D005379 ORTHO05D006661 3.3e-46 188.0 90 100.0
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 7.5e-27 123.6 58 98.3
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 5.6e-22 107.5 81 66.7
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 1.8e-20 102.4 81 61.7
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 6.8e-20 100.5 83 60.2
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 1.2e-19 99.8 81 61.7
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 1.2e-19 99.8 81 61.7
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.5e-19 99.4 83 59.0
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 2.6e-19 98.6 83 59.0
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 2.6e-19 98.6 83 60.2
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 3.4e-19 98.2 81 60.5
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 3.4e-19 98.2 83 61.4
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 4.4e-19 97.8 83 55.4
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 4.4e-19 97.8 82 59.8
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 5.8e-19 97.4 81 59.3
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 7.6e-19 97.1 83 54.2
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 9.9e-19 96.7 81 60.5
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 9.9e-19 96.7 110 50.0
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 1.3e-18 96.3 83 57.8
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 1.7e-18 95.9 81 58.0
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 2.2e-18 95.5 83 57.8
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 3.8e-18 94.7 83 60.2
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 4.9e-18 94.4 83 54.2
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 4.9e-18 94.4 81 56.8
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 6.4e-18 94.0 83 55.4
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 8.4e-18 93.6 81 58.0
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 8.4e-18 93.6 81 58.0
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 8.4e-18 93.6 81 58.0
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 8.4e-18 93.6 83 57.8
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 8.4e-18 93.6 83 56.6
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 1.1e-17 93.2 81 56.8
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 1.4e-17 92.8 81 55.6
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 1.4e-17 92.8 81 53.1
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 1.4e-17 92.8 81 55.6
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 1.9e-17 92.4 83 54.2
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 2.4e-17 92.0 83 54.2
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 2.4e-17 92.0 83 54.2
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 2.4e-17 92.0 84 59.5
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 4.2e-17 91.3 83 53.0
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 7.1e-17 90.5 83 51.8
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 7.1e-17 90.5 82 58.5
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 9.2e-17 90.1 83 50.6
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 9.2e-17 90.1 81 55.6
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 1.2e-16 89.7 83 53.0
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 1.2e-16 89.7 100 47.0
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 1.2e-16 89.7 82 57.3
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 1.6e-16 89.4 83 53.0
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 1.6e-16 89.4 83 50.6
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 2.7e-16 88.6 82 57.3
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 2.7e-16 88.6 83 53.0
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 2.7e-16 88.6 81 51.9
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 3.5e-16 88.2 82 56.1
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 3.5e-16 88.2 83 51.8
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 3.5e-16 88.2 81 54.3
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 4.6e-16 87.8 81 53.1
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 4.6e-16 87.8 83 51.8
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 6.0e-16 87.4 83 50.6
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 6.0e-16 87.4 83 51.8
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 6.0e-16 87.4 83 50.6
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 6.0e-16 87.4 83 50.6
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 6.0e-16 87.4 83 48.2
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 7.8e-16 87.0 81 53.1
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 7.8e-16 87.0 83 49.4
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 7.8e-16 87.0 84 54.8
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 1.3e-15 86.3 81 50.6
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 1.7e-15 85.9 84 53.6
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 2.3e-15 85.5 83 53.0
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 3.9e-15 84.7 81 51.9
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 5.6e-14 80.9 81 51.9
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 7.3e-14 80.5 83 50.6
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 9.6e-14 80.1 81 49.4
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 1.2e-13 79.7 83 50.6
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 1.2e-13 79.7 83 49.4
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 1.6e-13 79.3 83 50.6
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 2.1e-13 79.0 81 51.9
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 2.1e-13 79.0 83 50.6
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 2.8e-13 78.6 83 49.4
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 6.2e-13 77.4 83 48.2
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 8.1e-13 77.0 83 47.0
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 2.4e-12 75.5 111 40.5
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 1.2e-11 73.2 58 58.6
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 1.2e-11 73.2 83 47.0
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 1.5e-11 72.8 79 46.8
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.5e-11 72.8 51 60.8
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 2.0e-11 72.4 71 53.5
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.0e-11 72.4 75 48.0
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.0e-11 72.4 75 48.0
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 2.0e-11 72.4 50 68.0
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.6e-11 72.0 51 60.8
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 2.6e-11 72.0 66 54.5
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 3.4e-11 71.6 79 46.8
Lalb_Chr16g0382801 Lupinus albus HOM05D005379 ORTHO05D006661 3.4e-11 71.6 81 46.9
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 3.4e-11 71.6 66 54.5
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 4.4e-11 71.2 50 66.0
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 5.8e-11 70.9 83 42.2
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 7.6e-11 70.5 81 45.7
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.3e-10 69.7 124 36.3
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 1.7e-10 69.3 51 60.8
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 1.7e-10 69.3 79 44.3
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 2.2e-10 68.9 80 47.5
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 3.8e-10 68.2 50 62.0
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 4.9e-10 67.8 81 42.0
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 8.4e-10 67.0 50 62.0
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 8.4e-10 67.0 50 62.0
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 1.1e-09 66.6 60 56.7
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 4.2e-09 64.7 133 33.1
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 3.5e-08 61.6 103 38.8
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 4.6e-08 61.2 83 39.8
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 7.8e-08 60.5 114 37.7
Ah.13g066320 Amaranthus hybridus HOM05D005379 ORTHO05D006661 1.3e-07 59.7 118 35.6
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 2.3e-07 58.9 81 43.2
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 5.1e-07 57.8 50 52.0
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 6.6e-07 57.4 37 62.2
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 6.6e-07 57.4 37 62.2
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 8.7e-07 57.0 37 59.5
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 8.7e-07 57.0 37 59.5


User provided reference genes

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