Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 0.0e+00 1130.2 669 100.0
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 4.8e-86 323.2 680 42.6
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 1.6e-84 318.2 719 41.9
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.1e-82 312.0 713 40.4
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.5e-82 311.6 716 39.2
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 1.6e-68 265.0 700 38.4
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 7.7e-68 262.7 723 40.1
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 5.0e-67 260.0 714 34.7
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 2.1e-65 254.6 717 36.0
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 3.6e-65 253.8 688 30.8
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 2.3e-64 251.1 702 38.7
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 2.3e-64 251.1 728 36.3
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 1.2e-63 248.8 722 37.3
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 7.5e-63 246.1 690 33.9
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 1.8e-61 241.5 710 34.5
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 3.8e-59 233.8 725 33.9
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 5.0e-59 233.4 701 33.2
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 1.1e-58 232.3 692 36.0
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 3.3e-58 230.7 717 35.7
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 4.3e-58 230.3 709 32.0
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 4.7e-57 226.9 698 31.4
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 1.4e-56 225.3 687 32.3
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 2.3e-56 224.6 756 29.1
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 5.2e-56 223.4 684 32.9
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 6.8e-56 223.0 719 37.3
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 6.4e-54 216.5 699 28.6
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 6.4e-54 216.5 694 28.7
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 1.1e-53 215.7 692 30.8
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 2.5e-50 204.5 702 29.1
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 4.7e-49 200.3 720 34.3
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 8.0e-49 199.5 704 31.0
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 1.8e-48 198.4 681 36.6
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 4.0e-48 197.2 682 33.6
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 4.0e-48 197.2 783 28.6
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 5.2e-48 196.8 675 39.1
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 6.8e-48 196.4 704 28.3
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 1.5e-47 195.3 701 35.8
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 1.5e-47 195.3 687 33.2
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 2.6e-47 194.5 710 27.2
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 4.9e-46 190.3 690 34.9
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 1.9e-45 188.3 689 32.9
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 5.4e-45 186.8 729 26.2
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 1.6e-44 185.3 761 27.2
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 1.6e-44 185.3 687 33.9
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 2.1e-44 184.9 687 34.1
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 3.5e-44 184.1 692 34.2
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 4.6e-44 183.7 688 33.9
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 4.3e-42 177.2 695 34.5
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.2e-41 175.6 683 33.5
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 1.2e-41 175.6 692 27.0
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 2.6e-39 167.9 686 26.5
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 8.3e-38 162.9 819 26.0
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 1.4e-37 162.2 753 31.3
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 7.3e-34 149.8 577 30.5
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 9.5e-34 149.4 810 25.3
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 2.7e-28 131.3 359 32.6
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 5.1e-27 127.1 522 25.9
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 2.1e-25 121.7 92 59.8
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 1.4e-21 109.0 239 35.1
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 3.4e-15 87.8 160 38.1
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 3.5e-12 77.8 53 66.0
Psat6g082000 Pisum sativum HOM05D008222 ORTHO05D010364 3.8e-06 57.8 36 72.2


User provided reference genes

Program Settings