Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 1.7e-117 426.0 215 100.0
HPP92_009754 Vanilla planifolia HOM05D065211 ORTHO05D008874 3.3e-36 156.0 95 86.3
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 1.1e-12 77.8 60 61.7
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.4e-10 70.9 87 42.5
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 1.2e-09 67.8 64 51.6
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 2.6e-09 66.6 48 54.2
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 5.8e-09 65.5 64 50.0
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 5.8e-09 65.5 105 37.1
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 9.9e-09 64.7 60 50.0
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 6.4e-08 62.0 77 40.3
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 6.4e-08 62.0 76 48.7
Nn6g35090 Nelumbo nucifera HOM05D007333 ORTHO05D008874 6.4e-08 62.0 37 64.9
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 1.1e-07 61.2 61 52.5
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 1.4e-07 60.8 68 41.2
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 2.4e-07 60.1 42 54.8
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 3.2e-07 59.7 62 40.3
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 3.2e-07 59.7 53 45.3
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 3.2e-07 59.7 53 45.3
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 3.2e-07 59.7 53 45.3
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 4.2e-07 59.3 93 37.6
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 4.2e-07 59.3 43 60.5
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 4.2e-07 59.3 61 49.2
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 4.2e-07 59.3 65 50.8
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 5.5e-07 58.9 76 43.4
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 5.5e-07 58.9 78 44.9
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 5.5e-07 58.9 40 67.5
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 7.1e-07 58.5 57 54.4
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 7.1e-07 58.5 57 54.4
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 7.1e-07 58.5 91 35.2
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 9.3e-07 58.2 57 54.4
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 9.3e-07 58.2 57 54.4
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 9.3e-07 58.2 48 47.9
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.2e-06 57.8 60 45.0
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 1.2e-06 57.8 38 55.3
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.6e-06 57.4 59 50.8
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 1.6e-06 57.4 60 45.0
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.6e-06 57.4 45 48.9
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 1.6e-06 57.4 80 37.5
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 2.1e-06 57.0 58 51.7
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 2.1e-06 57.0 57 52.6
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 2.1e-06 57.0 81 43.2
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 2.1e-06 57.0 59 49.2
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 2.1e-06 57.0 59 49.2
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 2.1e-06 57.0 91 35.2
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 2.1e-06 57.0 58 55.2
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 2.7e-06 56.6 60 43.3
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 2.7e-06 56.6 58 53.4
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 2.7e-06 56.6 52 44.2
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 3.5e-06 56.2 57 40.4
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 3.5e-06 56.2 55 52.7
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 3.5e-06 56.2 60 41.7
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 3.5e-06 56.2 42 50.0
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 4.6e-06 55.8 67 49.3
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 6.0e-06 55.5 42 47.6
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 6.0e-06 55.5 80 42.5
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 6.0e-06 55.5 80 36.2
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 7.9e-06 55.1 74 40.5
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 7.9e-06 55.1 65 43.1


User provided reference genes

Program Settings