Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.2e-95 353.2 181 100.0
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 5.0e-86 321.2 169 95.9
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 4.7e-36 155.2 165 52.7
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 8.0e-36 154.5 169 53.8
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 1.0e-35 154.1 169 51.5
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 1.4e-35 153.7 190 48.9
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 1.8e-35 153.3 171 52.6
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.3e-35 152.9 172 51.7
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 2.3e-35 152.9 171 52.6
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 2.3e-35 152.9 171 52.0
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 3.1e-35 152.5 166 54.2
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 3.1e-35 152.5 166 50.6
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 4.0e-35 152.1 171 52.6
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 4.0e-35 152.1 165 51.5
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 5.2e-35 151.8 170 51.8
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 6.8e-35 151.4 171 50.9
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 6.8e-35 151.4 184 52.2
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 1.2e-34 150.6 171 53.2
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.2e-34 150.6 169 50.3
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 1.2e-34 150.6 173 53.8
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 1.5e-34 150.2 171 55.0
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 2.0e-34 149.8 170 52.9
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 2.6e-34 149.4 168 51.8
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 2.6e-34 149.4 168 52.4
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 2.6e-34 149.4 170 51.8
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 3.4e-34 149.1 168 51.8
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 3.4e-34 149.1 169 52.1
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 4.4e-34 148.7 169 55.6
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 4.4e-34 148.7 170 51.2
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 1.3e-33 147.1 178 50.0
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 2.2e-33 146.4 171 53.2
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 2.9e-33 146.0 176 48.9
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 2.9e-33 146.0 175 50.9
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 2.9e-33 146.0 178 48.9
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 3.7e-33 145.6 165 49.1
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 4.9e-33 145.2 178 51.1
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 4.9e-33 145.2 173 52.0
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 6.4e-33 144.8 167 50.3
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 6.4e-33 144.8 173 52.0
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 8.3e-33 144.4 178 50.6
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 8.3e-33 144.4 178 50.6
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 8.3e-33 144.4 176 52.3
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.1e-32 144.1 171 50.3
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.4e-32 143.7 178 48.3
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.4e-32 143.7 171 50.3
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 1.4e-32 143.7 172 53.5
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 1.9e-32 143.3 170 49.4
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 3.2e-32 142.5 114 65.8
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 3.2e-32 142.5 110 66.4
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 3.2e-32 142.5 170 51.8
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 4.1e-32 142.1 171 49.7
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 4.1e-32 142.1 171 49.7
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 7.0e-32 141.4 155 52.3
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.2e-31 140.6 171 49.7
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 1.2e-31 140.6 172 50.6
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 1.2e-31 140.6 160 49.4
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.2e-31 140.6 171 49.1
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 1.6e-31 140.2 170 47.6
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 1.6e-31 140.2 174 47.1
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 1.6e-31 140.2 169 47.3
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 2.7e-31 139.4 166 51.8
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 2.7e-31 139.4 165 49.7
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 3.5e-31 139.0 132 58.3
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 4.6e-31 138.7 119 58.8
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 4.6e-31 138.7 170 49.4
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 6.0e-31 138.3 131 58.0
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 7.8e-31 137.9 118 59.3
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.3e-30 137.1 118 58.5
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 1.3e-30 137.1 153 48.4
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.7e-30 136.7 98 68.4
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 1.7e-30 136.7 113 63.7
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.0e-30 136.0 177 47.5
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.0e-30 136.0 177 47.5
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 3.0e-30 136.0 188 47.3
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 3.0e-30 136.0 164 46.3
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 3.9e-30 135.6 185 47.0
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 5.0e-30 135.2 170 46.5
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 5.0e-30 135.2 177 45.2
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.9e-29 133.3 180 46.7
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 2.5e-29 132.9 150 49.3
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 2.5e-29 132.9 183 44.8
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 7.3e-29 131.3 170 45.9
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 7.3e-29 131.3 127 55.1
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 9.5e-29 131.0 149 47.7
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 9.5e-29 131.0 83 74.7
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 1.2e-28 130.6 165 47.3
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.2e-28 130.6 183 43.2
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.2e-28 130.6 183 43.2
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 1.6e-28 130.2 171 46.2
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 3.6e-28 129.0 104 60.6
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 3.6e-28 129.0 166 44.6
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 3.6e-28 129.0 172 47.1
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 4.7e-28 128.6 189 41.8
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 4.7e-28 128.6 189 41.8
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 4.7e-28 128.6 156 48.1
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 1.4e-27 127.1 85 70.6
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.2e-26 124.0 169 43.2
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.2e-26 124.0 90 65.6
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.7e-25 120.2 88 69.3
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 1.1e-24 117.5 97 60.8
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 1.1e-24 117.5 84 65.5
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 2.4e-24 116.3 105 58.1
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 2.4e-24 116.3 72 72.2
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 4.1e-24 115.5 86 65.1
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.2e-23 114.0 116 56.9
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 3.0e-22 109.4 72 68.1
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 1.5e-21 107.1 101 54.5
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 1.4e-19 100.5 73 53.4
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 2.3e-19 99.8 64 70.3
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 2.9e-17 92.8 69 56.5
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.1e-16 90.9 168 40.5
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 1.1e-16 90.9 70 55.7
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.1e-13 80.9 78 47.4


User provided reference genes

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