Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 2.6e-107 392.1 206 100.0
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 6.1e-64 248.1 177 75.7
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 8.8e-63 244.2 176 73.3
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 3.1e-60 235.7 171 74.3
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 4.1e-60 235.3 169 74.0
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 9.1e-60 234.2 186 68.3
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 1.0e-58 230.7 179 65.4
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 1.7e-58 229.9 171 70.2
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 3.8e-58 228.8 171 70.8
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 5.0e-58 228.4 165 72.1
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 5.0e-58 228.4 184 66.3
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 6.5e-58 228.0 173 68.8
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 6.5e-58 228.0 170 72.4
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 1.9e-57 226.5 180 66.7
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 2.5e-57 226.1 171 70.2
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 2.5e-57 226.1 168 70.8
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 3.2e-57 225.7 178 68.0
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 4.2e-57 225.3 173 68.2
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 1.6e-56 223.4 169 69.2
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 2.1e-56 223.0 173 68.2
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 2.7e-56 222.6 173 67.6
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 4.7e-56 221.9 171 67.3
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 6.1e-56 221.5 172 70.9
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 1.0e-55 220.7 171 69.0
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 1.4e-55 220.3 168 69.0
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.4e-55 220.3 167 68.3
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 1.8e-55 219.9 179 64.8
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 1.8e-55 219.9 170 66.5
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 2.3e-55 219.5 171 69.0
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 3.0e-55 219.2 171 68.4
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 5.2e-55 218.4 177 65.0
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 6.7e-55 218.0 171 67.3
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.1e-54 217.2 172 66.3
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 1.5e-54 216.9 167 68.3
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 2.0e-54 216.5 189 63.0
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 3.3e-54 215.7 168 67.3
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 3.3e-54 215.7 168 67.9
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 4.4e-54 215.3 176 66.5
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 5.7e-54 214.9 187 63.1
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 5.7e-54 214.9 169 65.1
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 7.4e-54 214.5 164 70.1
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 9.7e-54 214.2 170 67.6
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 9.7e-54 214.2 172 66.9
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 1.3e-53 213.8 171 67.3
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 2.2e-53 213.0 169 63.9
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 3.7e-53 212.2 171 66.1
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 4.8e-53 211.8 169 65.7
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 6.3e-53 211.5 173 67.1
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 1.1e-52 210.7 165 68.5
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 1.4e-52 210.3 169 65.7
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 1.4e-52 210.3 171 65.5
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 1.4e-52 210.3 173 64.7
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.8e-52 209.9 174 64.4
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 4.1e-52 208.8 177 63.8
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 7.0e-52 208.0 168 66.1
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 1.6e-51 206.8 171 64.3
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 1.7e-50 203.4 150 70.7
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 1.7e-50 203.4 170 64.7
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 1.7e-50 203.4 177 63.8
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 2.2e-50 203.0 174 63.8
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 3.8e-50 202.2 170 64.1
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 5.0e-50 201.8 184 62.5
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 8.5e-50 201.1 170 64.1
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 1.1e-49 200.7 170 64.1
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 1.1e-49 200.7 170 62.9
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 1.5e-49 200.3 170 63.5
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 2.5e-49 199.5 170 62.9
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 7.2e-49 198.0 170 62.9
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 7.2e-49 198.0 165 64.8
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 9.4e-49 197.6 150 68.7
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 2.1e-48 196.4 165 61.8
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 3.6e-48 195.7 172 63.4
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 4.7e-48 195.3 141 73.0
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 6.1e-48 194.9 171 63.2
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 6.1e-48 194.9 171 63.2
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 8.0e-48 194.5 166 64.5
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 1.4e-47 193.7 170 61.8
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 1.8e-47 193.4 171 62.6
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 1.8e-47 193.4 171 62.6
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 8.8e-47 191.0 173 59.5
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 2.6e-46 189.5 170 60.6
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 3.3e-46 189.1 162 61.7
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 3.7e-45 185.7 170 58.8
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 3.7e-45 185.7 195 53.3
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 4.8e-45 185.3 168 60.1
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 5.3e-44 181.8 255 47.5
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 7.0e-44 181.4 152 61.2
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 9.1e-44 181.0 169 58.6
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 5.9e-43 178.3 141 66.0
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 3.8e-42 175.6 136 69.9
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 6.5e-42 174.9 204 50.5
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 1.9e-41 173.3 120 73.3
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 2.6e-38 162.9 177 50.8
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 2.6e-38 162.9 131 65.6
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 2.6e-38 162.9 131 62.6
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 4.8e-37 158.7 133 63.9
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 1.4e-36 157.1 173 50.3
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 9.1e-36 154.5 183 45.4
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 3.3e-33 146.0 139 59.7
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 3.3e-33 146.0 140 55.7
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 1.5e-30 137.1 111 64.0
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 4.4e-30 135.6 114 63.2
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 2.4e-28 129.8 116 61.2
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 5.6e-25 118.6 160 40.6
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 2.0e-19 100.1 69 73.9
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 1.5e-14 84.0 93 51.6
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 4.1e-12 75.9 55 72.7
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 1.0e-10 71.2 160 28.8
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 2.3e-10 70.1 39 82.1
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 4.7e-08 62.4 60 58.3


User provided reference genes

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