Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009694 Vanilla planifolia HOM05D000636 ORTHO05D429859 2.1e-199 698.7 336 100.0
HPP92_009663 Vanilla planifolia HOM05D000636 ORTHO05D006656 9.7e-35 151.8 367 39.2
ATR0044G033 Amborella trichopoda HOM05D000636 ORTHO05D006656 3.9e-20 103.2 370 32.2
ClCG01G024570 Citrullus lanatus HOM05D000636 ORTHO05D006656 2.6e-19 100.5 307 33.9
MELO3C007138.2 Cucumis melo HOM05D000636 ORTHO05D006656 3.3e-19 100.1 348 32.2
CsaV3_6G051690 Cucumis sativus L. HOM05D000636 ORTHO05D006656 4.4e-19 99.8 307 33.2
Sed0015259 Sechium edule HOM05D000636 ORTHO05D006656 4.4e-19 99.8 300 33.7
Zm00001eb370700 Zea mays HOM05D000636 ORTHO05D006656 5.7e-19 99.4 342 33.0
Psat1g190720 Pisum sativum HOM05D000636 ORTHO05D006656 9.7e-19 98.6 300 35.0
Nn3g20756 Nelumbo nucifera HOM05D000636 ORTHO05D006656 1.7e-18 97.8 337 31.8
Sopen02g019630 Solanum pennellii HOM05D000636 ORTHO05D006656 1.7e-18 97.8 301 35.2
Zm00001eb152750 Zea mays HOM05D000636 ORTHO05D006656 1.7e-18 97.8 342 32.2
Solyc02g070540.3 Solanum lycopersicum HOM05D000636 ORTHO05D006656 2.2e-18 97.4 309 34.0
Nn4g26548 Nelumbo nucifera HOM05D000636 ORTHO05D006656 4.8e-18 96.3 331 31.7
Nitab4.5_0002275g0110 Nicotiana tabacum HOM05D000636 ORTHO05D006656 4.8e-18 96.3 301 34.9
Os01g0756600 Oryza sativa ssp. japonica HOM05D000636 ORTHO05D006656 4.8e-18 96.3 353 31.4
AUR62030208 Chenopodium quinoa HOM05D000636 ORTHO05D006656 6.3e-18 95.9 311 33.1
MBI07_g26357_MAGBIO Magnolia biondii HOM05D000636 ORTHO05D006656 6.3e-18 95.9 300 32.3
PGR042G2081 Punica granatum HOM05D000636 ORTHO05D006656 6.3e-18 95.9 300 33.7
Ah.09g232630 Amaranthus hybridus HOM05D000636 ORTHO05D006656 8.2e-18 95.5 316 32.9
Ca_00548_v3 Cicer arietinum L. HOM05D000636 ORTHO05D006656 8.2e-18 95.5 300 35.0
MBI10_g32112_MAGBIO Magnolia biondii HOM05D000636 ORTHO05D006656 8.2e-18 95.5 302 35.1
Nitab4.5_0009607g0010 Nicotiana tabacum HOM05D000636 ORTHO05D006656 8.2e-18 95.5 301 34.9
VMungo0540G0940 Vigna mungo HOM05D000636 ORTHO05D006656 8.2e-18 95.5 300 35.0
CDE09G0598 Ceratophyllum demersum HOM05D000636 ORTHO05D006656 1.1e-17 95.1 343 32.7
CAN.G1859.3 Capsicum annuum HOM05D000636 ORTHO05D006656 1.4e-17 94.7 301 34.9
Duzib160G0678 Durio zibethinus HOM05D000636 ORTHO05D006656 1.4e-17 94.7 300 34.3
Cc00_g07930 Coffea canephora HOM05D000636 ORTHO05D006656 1.8e-17 94.4 301 35.2
Eucgr.E02406 Eucalyptus grandis HOM05D000636 ORTHO05D006656 1.8e-17 94.4 301 34.6
Glyma.15G094700 Glycine max HOM05D000636 ORTHO05D006656 1.8e-17 94.4 300 34.3
PGSC0003DMG400021161 Solanum tuberosum HOM05D000636 ORTHO05D006656 1.8e-17 94.4 301 34.9
MD05G1284600 Malus domestica HOM05D000636 ORTHO05D006656 2.4e-17 94.0 300 35.0
Oeu052378.1 Olea europaea HOM05D000636 ORTHO05D006656 2.4e-17 94.0 305 34.8
EL10Ac8g19711 Beta vulgaris HOM05D000636 ORTHO05D006656 3.1e-17 93.6 307 34.5
Glyma.13G217700 Glycine max HOM05D000636 ORTHO05D006656 3.1e-17 93.6 300 36.0
Manes.17G069400 Manihot esculenta HOM05D000636 ORTHO05D006656 3.1e-17 93.6 303 34.7
Rhsim13G0194600 Rhododendron simsii HOM05D005056 ORTHO05D006656 3.1e-17 93.6 304 34.9
MSTRG.13251 Avicennia marina HOM05D000636 ORTHO05D006656 4.1e-17 93.2 305 34.4
SalBow7G1051 Salvia bowleyana HOM05D000636 ORTHO05D006656 4.1e-17 93.2 301 34.2
Migut.M00915 Erythranthe guttata HOM05D000636 ORTHO05D006656 5.3e-17 92.8 309 32.4
TPR.G28609 Trifolium pratense HOM05D000636 ORTHO05D006656 5.3e-17 92.8 300 34.7
Cpa.g.sc166.14 Carica papaya HOM05D000636 ORTHO05D006656 7.0e-17 92.4 304 34.5
arahy.Tifrunner.gnm1.ann1.07RNNT Arachis hypogaea HOM05D000636 ORTHO05D006656 9.1e-17 92.0 300 34.0
Gohir.D05G151400 Gossypium hirsutum HOM05D000636 ORTHO05D006656 9.1e-17 92.0 300 34.0
Gorai.009G155400 Gossypium raimondii HOM05D000636 ORTHO05D006656 9.1e-17 92.0 304 32.9
RcHm_v2.0_Chr5g0013971 Rosa chinensis HOM05D000636 ORTHO05D006656 9.1e-17 92.0 300 36.0
Lj6g0010836 Lotus japonicus HOM05D000636 ORTHO05D006656 1.2e-16 91.7 301 33.6
Actinidia19522 Actinidia chinensis HOM05D000636 ORTHO05D006656 1.5e-16 91.3 302 34.4
MSTRG.14772 Avicennia marina HOM05D000636 ORTHO05D006656 1.5e-16 91.3 302 34.1
CSS0006762 Camellia sinensis var. sinensis HOM05D000636 ORTHO05D006656 1.5e-16 91.3 307 32.6
Phvul.006G164100 Phaseolus vulgaris HOM05D000636 ORTHO05D006656 1.5e-16 91.3 300 34.0
THA.LOC104814294 Tarenaya hassleriana HOM05D000636 ORTHO05D006656 1.5e-16 91.3 380 33.2
TAR629G1290 Trochodendron aralioides HOM05D000636 ORTHO05D006656 1.5e-16 91.3 311 31.5
Gohir.A05G148800 Gossypium hirsutum HOM05D000636 ORTHO05D006656 2.0e-16 90.9 304 32.6
Peaxi162Scf01211g00132 Petunia axillaris HOM05D000636 ORTHO05D006656 2.0e-16 90.9 301 34.6
Prupe.4G079800 Prunus persica HOM05D000636 ORTHO05D006656 2.0e-16 90.9 300 34.7
CDE11G0420 Ceratophyllum demersum HOM05D000636 ORTHO05D006656 2.6e-16 90.5 306 32.0
Gohir.D10G041100 Gossypium hirsutum HOM05D000636 ORTHO05D006656 2.6e-16 90.5 300 33.7
CiPaw.09G124700 Carya illinoinensis HOM05D000636 ORTHO05D006656 4.5e-16 89.7 300 33.3
Haze_05585 Corylus avellana HOM05D000636 ORTHO05D006656 4.5e-16 89.7 303 33.0
Cfa000954 Carpinus fangiana HOM05D000636 ORTHO05D006656 5.9e-16 89.4 304 33.6
CiPaw.10G092500 Carya illinoinensis HOM05D000636 ORTHO05D006656 5.9e-16 89.4 300 32.7
DCAR_003920 Daucus carota HOM05D000636 ORTHO05D006656 5.9e-16 89.4 308 31.8
DCAR_007892 Daucus carota HOM05D000979 ORTHO05D001811 5.9e-16 89.4 300 32.3
Duzib235G1007 Durio zibethinus HOM05D000636 ORTHO05D006656 5.9e-16 89.4 300 34.3
Thhalv10007784m.g Eutrema salsugineum HOM05D000636 ORTHO05D006656 5.9e-16 89.4 307 33.6
Gohir.A10G040200 Gossypium hirsutum HOM05D000636 ORTHO05D006656 5.9e-16 89.4 300 33.0
Gorai.011G043300 Gossypium raimondii HOM05D000636 ORTHO05D006656 5.9e-16 89.4 300 33.7
GSVIVG01021443001 Vitis vinifera HOM05D000636 ORTHO05D006656 5.9e-16 89.4 308 32.1
AL4G30480 Arabidopsis lyrata HOM05D000636 ORTHO05D006656 7.7e-16 89.0 314 32.5
AT2G34510 Arabidopsis thaliana HOM05D000636 ORTHO05D006656 7.7e-16 89.0 307 33.2
vmacro03964 Vaccinium macrocarpon HOM05D000636 ORTHO05D006656 7.7e-16 89.0 305 34.8
FAN16G2192 Fragaria x ananassa HOM05D000636 ORTHO05D006656 1.0e-15 88.6 300 35.3
Migut.H01365 Erythranthe guttata HOM05D000636 ORTHO05D006656 1.3e-15 88.2 301 32.6
Lalb_Chr15g0086891 Lupinus albus HOM05D000636 ORTHO05D006656 1.7e-15 87.8 300 34.3
MD10G1263000 Malus domestica HOM05D000636 ORTHO05D006656 1.7e-15 87.8 304 33.9
Thhalv10016749m.g Eutrema salsugineum HOM05D000636 ORTHO05D006656 2.2e-15 87.4 306 32.7
Lsat_1_v5_gn_7_29861 Lactuca sativa HOM05D000636 ORTHO05D006656 2.2e-15 87.4 300 31.7
FAN11G3484 Fragaria x ananassa HOM05D000636 ORTHO05D006656 2.9e-15 87.0 300 35.0
FAN21G1891 Fragaria x ananassa HOM05D000636 ORTHO05D006656 2.9e-15 87.0 300 35.0
Thecc.06G151600 Theobroma cacao HOM05D000636 ORTHO05D006656 2.9e-15 87.0 300 33.0
Carub.0001s2823 Capsella rubella HOM05D000636 ORTHO05D006656 3.8e-15 86.7 307 33.6
FAN25G3675 Fragaria x ananassa HOM05D000636 ORTHO05D006656 3.8e-15 86.7 300 35.0
Lj2A306T69 Lonicera japonica HOM05D000636 ORTHO05D006656 3.8e-15 86.7 300 32.0
SGA_v2.0_scaffold1G00165 Striga asiatica HOM05D004347 ORTHO05D005270 3.8e-15 86.7 316 32.3
Duzib192G0976 Durio zibethinus HOM05D000636 ORTHO05D006656 5.0e-15 86.3 300 34.0
FvH4_3g05680 Fragaria vesca HOM05D000636 ORTHO05D006656 5.0e-15 86.3 300 35.0
Manes.15G121000 Manihot esculenta HOM05D000636 ORTHO05D006656 5.0e-15 86.3 305 32.5
Medtr2g019600 Medicago truncatula HOM05D000636 ORTHO05D006656 5.0e-15 86.3 300 33.3
AT1G29980 Arabidopsis thaliana HOM05D000636 ORTHO05D006656 6.5e-15 85.9 307 33.2
Dinv30735 Davidia involucrata HOM05D000636 ORTHO05D006656 6.5e-15 85.9 300 33.3
BcaC05g27009 Brassica carinata HOM05D000636 ORTHO05D006656 8.5e-15 85.5 311 33.8
C05p28740 Brassica napus HOM05D000636 ORTHO05D006656 8.5e-15 85.5 311 33.8
BolC5t31592H Brassica oleracea HOM05D000636 ORTHO05D006656 8.5e-15 85.5 311 33.8
Sc17g0004950 Simmondsia chinensis HOM05D000636 ORTHO05D006656 8.5e-15 85.5 320 31.2
BcaC02g11513 Brassica carinata HOM05D000636 ORTHO05D006656 1.5e-14 84.7 302 32.8
C04p14520 Brassica napus HOM05D000636 ORTHO05D006656 1.5e-14 84.7 302 32.8
CARHR128600 Cardamine hirsuta HOM05D000636 ORTHO05D006656 1.5e-14 84.7 306 33.0
TWI73G0555 Tripterygium wilfordii HOM05D000636 ORTHO05D006656 1.5e-14 84.7 304 32.2
A05p11170 Brassica napus HOM05D000636 ORTHO05D006656 1.9e-14 84.3 302 32.8
PSO170G6316 Papaver somniferum HOM05D000636 ORTHO05D006656 1.9e-14 84.3 340 31.8
QL05p058459 Quercus lobata HOM05D000636 ORTHO05D006656 1.9e-14 84.3 301 33.9
Sp1g25860 Schrenkiella parvula HOM05D000636 ORTHO05D006656 1.9e-14 84.3 307 33.2
BcaB07g32597 Brassica carinata HOM05D000636 ORTHO05D006656 2.5e-14 84.0 307 33.6
PSO017G1337 Papaver somniferum HOM05D000636 ORTHO05D006656 2.5e-14 84.0 340 31.8
AL1G43870 Arabidopsis lyrata HOM05D000636 ORTHO05D006656 3.2e-14 83.6 307 33.2
CANSAT35G0164 Cannabis sativa HOM05D000636 ORTHO05D006656 3.2e-14 83.6 299 33.1
CARHR029410 Cardamine hirsuta HOM05D000636 ORTHO05D006656 3.2e-14 83.6 307 33.9
Hma1.2p1_0286F.1_g114080 Hydrangea macrophylla HOM05D000636 ORTHO05D006656 3.2e-14 83.6 300 32.7
BcaC05g27008 Brassica carinata HOM05D000636 ORTHO05D006656 4.2e-14 83.2 307 33.6
HanXRQChr04g0118581 Helianthus annuus HOM05D000636 ORTHO05D006656 4.2e-14 83.2 300 32.0
Hund21530 Selenicereus undatus HOM05D000636 ORTHO05D006656 4.2e-14 83.2 309 32.4
COL.COLO4_31082 Corchorus olitorius HOM05D000636 ORTHO05D006656 5.5e-14 82.8 230 35.2
BcaB02g09536 Brassica carinata HOM05D000636 ORTHO05D006656 7.2e-14 82.4 302 32.5
AUR62039773 Chenopodium quinoa HOM05D000636 ORTHO05D006656 9.4e-14 82.0 240 33.8
Carub.0004s1618 Capsella rubella HOM05D000636 ORTHO05D006656 1.2e-13 81.6 308 33.1
ECA236G3217 Erigeron canadensis HOM05D000636 ORTHO05D006656 1.2e-13 81.6 300 31.7
Os01g0531400 Oryza sativa ssp. japonica HOM05D000636 ORTHO05D006656 1.2e-13 81.6 156 39.1
Sabra11G0069500 Salix brachista HOM05D000636 ORTHO05D006656 1.2e-13 81.6 297 33.3
A09p36540 Brassica napus HOM05D000636 ORTHO05D006656 1.6e-13 81.3 311 33.4
BraA09t39175Z Brassica rapa HOM05D000636 ORTHO05D006656 1.6e-13 81.3 311 33.4
THA.LOC104820646 Tarenaya hassleriana HOM05D000636 ORTHO05D006656 1.6e-13 81.3 310 31.9
Aqoxy4G00019 Aquilegia oxysepala HOM05D000636 ORTHO05D006656 2.1e-13 80.9 299 31.1
SGA_v2.0_scaffold106G30646 Striga asiatica HOM05D000636 ORTHO05D006656 2.1e-13 80.9 298 31.5
Atru.chr10.1249 Acer truncatum HOM05D000636 ORTHO05D006656 2.7e-13 80.5 300 33.0
Ciclev10015527m.g Citrus clementina HOM05D000636 ORTHO05D006656 2.7e-13 80.5 299 34.4
Potri.011G087500 Populus trichocarpa HOM05D000636 ORTHO05D006656 4.7e-13 79.7 301 33.6
Dinv32264 Davidia involucrata HOM05D000636 ORTHO05D006656 1.4e-12 78.2 304 31.2
Sp4g16770 Schrenkiella parvula HOM05D000636 ORTHO05D006656 1.4e-12 78.2 306 31.7
Aa31LG10G6880 Aethionema arabicum HOM05D000636 ORTHO05D006656 1.5e-11 74.7 306 30.4
Aa31LG6G5690 Aethionema arabicum HOM05D000636 ORTHO05D006656 2.6e-11 73.9 272 32.4
Oeu042444.1 Olea europaea HOM05D000636 ORTHO05D006656 3.3e-11 73.6 232 33.2
SEGI_15886 Sequoiadendron giganteum HOM05D000636 ORTHO05D006656 1.7e-10 71.2 317 30.0
unitig_61.g26079 Utricularia gibba HOM05D000636 ORTHO05D006656 2.2e-10 70.9 304 30.3
unitig_0.g930 Utricularia gibba HOM05D000636 ORTHO05D006656 1.8e-09 67.8 277 30.3
Prupe.1G472800 Prunus persica HOM05D000636 ORTHO05D001947 2.6e-08 63.9 269 30.5
Carub.0007s0812 Capsella rubella HOM05D000636 ORTHO05D001947 7.7e-08 62.4 254 30.7
MD15G1120000 Malus domestica HOM05D000636 ORTHO05D001947 1.0e-07 62.0 269 30.1
Zm00001eb161870 Zea mays HOM05D000636 ORTHO05D001947 1.3e-07 61.6 276 30.4
BcaC08g47576 Brassica carinata HOM05D000636 ORTHO05D001947 2.2e-07 60.8 267 29.2
C06p54200 Brassica napus HOM05D000636 ORTHO05D001947 5.0e-07 59.7 265 29.1
Lalb_Chr20g0118011 Lupinus albus HOM05D000636 ORTHO05D006656 5.0e-07 59.7 98 43.9
MD08G1143200 Malus domestica HOM05D000636 ORTHO05D001947 5.0e-07 59.7 269 29.7
A07p45360 Brassica napus HOM05D000636 ORTHO05D001947 8.5e-07 58.9 265 29.4
BolC6t40433H Brassica oleracea HOM05D000636 ORTHO05D001947 8.5e-07 58.9 265 29.1
Carub.0002s2730 Capsella rubella HOM05D000636 ORTHO05D001947 8.5e-07 58.9 268 31.0
THA.LOC104803829 Tarenaya hassleriana HOM05D000636 ORTHO05D001947 8.5e-07 58.9 266 30.1
Duzib168G0226 Durio zibethinus HOM05D000636 ORTHO05D001947 1.5e-06 58.2 265 29.8
CiPaw.01G243600 Carya illinoinensis HOM05D000636 ORTHO05D001947 1.9e-06 57.8 351 27.1
Os02g0205200 Oryza sativa ssp. japonica HOM05D000636 ORTHO05D001947 2.5e-06 57.4 268 29.1
SEGI_26466 Sequoiadendron giganteum HOM05D000636 ORTHO05D001947 2.5e-06 57.4 192 31.8
AL7G19370 Arabidopsis lyrata HOM05D000636 ORTHO05D001947 3.2e-06 57.0 195 29.2
AT4G32460 Arabidopsis thaliana HOM05D000636 ORTHO05D001947 3.2e-06 57.0 195 29.2
Sp5g35570 Schrenkiella parvula HOM05D000636 ORTHO05D001947 3.2e-06 57.0 267 29.6
CARHR074250 Cardamine hirsuta HOM05D000636 ORTHO05D001947 4.2e-06 56.6 267 29.2
CiPaw.08G013700 Carya illinoinensis HOM05D000636 ORTHO05D001947 4.2e-06 56.6 269 29.7
COL.COLO4_23985 Corchorus olitorius HOM05D000636 ORTHO05D001947 4.2e-06 56.6 247 30.0
RcHm_v2.0_Chr6g0298661 Rosa chinensis HOM05D000636 ORTHO05D001947 4.2e-06 56.6 266 30.1
Actinidia13259 Actinidia chinensis HOM05D000636 ORTHO05D001947 5.5e-06 56.2 273 28.9
AL2G41270 Arabidopsis lyrata HOM05D000636 ORTHO05D001947 5.5e-06 56.2 268 29.9
Gorai.013G110800 Gossypium raimondii HOM05D000636 ORTHO05D001947 5.5e-06 56.2 264 29.2
Aa31LG2G17460 Aethionema arabicum HOM05D000636 ORTHO05D001947 7.2e-06 55.8 265 29.4
C01p06530 Brassica napus HOM05D000636 ORTHO05D001947 7.2e-06 55.8 266 29.3
DCAR_029686 Daucus carota HOM05D000636 ORTHO05D002338 7.2e-06 55.8 284 28.5
Gohir.D03G060613 Gossypium hirsutum HOM05D000636 ORTHO05D001947 7.2e-06 55.8 264 29.2
Manes.11G050870 Manihot esculenta HOM05D000636 ORTHO05D001947 7.2e-06 55.8 267 28.8
Zm00001eb235330 Zea mays HOM05D000636 ORTHO05D001947 7.2e-06 55.8 267 29.6
A01p05910 Brassica napus HOM05D000636 ORTHO05D001947 9.4e-06 55.5 266 29.3
BraA01t00558Z Brassica rapa HOM05D000636 ORTHO05D001947 9.4e-06 55.5 266 29.3
PGR031G1548 Punica granatum HOM05D000636 ORTHO05D001947 9.4e-06 55.5 277 30.0


User provided reference genes

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