Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 3.4e-209 731.5 382 100.0
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 7.8e-57 225.3 344 43.3
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 4.4e-52 209.5 324 41.0
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 8.4e-51 205.3 333 38.4
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 2.4e-50 203.8 332 39.8
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 4.2e-50 203.0 337 38.6
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 1.2e-49 201.4 330 37.9
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 6.0e-49 199.1 339 39.2
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 7.8e-49 198.7 334 38.3
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 1.0e-48 198.4 331 37.5
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 2.3e-48 197.2 323 38.1
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 3.0e-48 196.8 332 37.0
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 5.1e-48 196.1 326 39.9
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 6.6e-48 195.7 326 38.7
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 8.7e-48 195.3 323 38.4
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 1.1e-47 194.9 329 37.1
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 2.5e-47 193.7 334 37.7
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 7.3e-47 192.2 341 38.1
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 7.3e-47 192.2 328 36.6
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 7.3e-47 192.2 325 38.2
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 9.6e-47 191.8 344 38.1
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 9.6e-47 191.8 333 36.6
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 9.6e-47 191.8 330 38.2
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 9.6e-47 191.8 331 37.5
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 1.3e-46 191.4 328 38.7
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 1.6e-46 191.0 332 35.8
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 2.1e-46 190.7 326 38.0
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 3.6e-46 189.9 327 37.9
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 4.8e-46 189.5 328 40.9
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 6.2e-46 189.1 331 37.2
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 6.2e-46 189.1 329 36.2
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 1.1e-45 188.3 329 38.0
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 1.4e-45 188.0 334 37.4
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 1.8e-45 187.6 324 38.9
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 2.4e-45 187.2 327 37.3
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 4.0e-45 186.4 349 36.1
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 5.3e-45 186.0 327 38.2
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 5.3e-45 186.0 338 37.6
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 6.9e-45 185.7 329 38.6
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.2e-44 184.9 327 36.7
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.5e-44 184.5 323 36.5
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 2.0e-44 184.1 353 36.5
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 2.0e-44 184.1 329 36.5
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 2.6e-44 183.7 321 38.9
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 2.6e-44 183.7 336 36.6
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 5.8e-44 182.6 332 35.5
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 7.6e-44 182.2 332 38.6
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 7.6e-44 182.2 336 34.8
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 9.9e-44 181.8 324 38.0
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 1.3e-43 181.4 341 35.8
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 1.3e-43 181.4 329 36.2
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 1.3e-43 181.4 327 37.0
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 1.3e-43 181.4 326 35.9
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 2.2e-43 180.6 335 34.9
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 2.9e-43 180.3 327 35.8
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 3.8e-43 179.9 332 36.1
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 4.9e-43 179.5 329 35.9
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 6.4e-43 179.1 317 38.2
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 8.4e-43 178.7 359 35.1
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 3.2e-42 176.8 327 36.1
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 4.2e-42 176.4 330 37.0
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 4.2e-42 176.4 317 36.6
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 7.1e-42 175.6 302 42.4
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 9.3e-42 175.3 327 35.8
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 9.3e-42 175.3 327 35.8
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 9.3e-42 175.3 327 35.8
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 2.1e-41 174.1 343 35.0
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 2.7e-41 173.7 326 37.1
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 2.7e-41 173.7 334 35.9
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 4.6e-41 172.9 331 36.6
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 6.0e-41 172.6 325 36.6
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 6.0e-41 172.6 347 34.6
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 7.9e-41 172.2 320 36.2
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 2.3e-40 170.6 333 35.1
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 3.0e-40 170.2 332 35.8
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 5.1e-40 169.5 352 35.8
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 5.1e-40 169.5 334 35.6
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 1.5e-39 167.9 328 35.4
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 3.3e-39 166.8 334 32.9
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 5.6e-39 166.0 338 37.0
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 5.6e-39 166.0 338 37.0
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 5.6e-39 166.0 338 37.0
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 1.3e-38 164.9 328 33.8
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 2.1e-38 164.1 335 33.4
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 2.8e-38 163.7 325 34.5
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 1.8e-37 161.0 333 34.5
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 5.3e-37 159.5 334 33.5
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 9.0e-37 158.7 295 35.6
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 1.5e-36 157.9 337 33.2
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 2.0e-36 157.5 337 35.0
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 2.6e-36 157.1 326 35.6
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 3.4e-36 156.8 334 35.0
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 7.6e-36 155.6 337 35.0
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 1.3e-32 144.8 316 32.3
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 5.1e-32 142.9 187 40.1
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 8.7e-32 142.1 309 34.0
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 1.1e-31 141.7 320 32.5
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 1.5e-31 141.4 326 31.3
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 2.1e-30 137.5 252 37.7
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 2.8e-30 137.1 304 32.6
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 6.2e-30 136.0 259 39.0
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 7.6e-28 129.0 252 35.3
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 1.3e-27 128.3 168 40.5
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 2.2e-27 127.5 337 31.2
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 1.2e-25 121.7 342 28.1
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 1.3e-24 118.2 310 29.4
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 3.9e-24 116.7 274 33.2
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 1.5e-23 114.8 330 29.7
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 5.0e-19 99.8 117 46.2
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 5.0e-19 99.8 183 30.6
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 2.7e-17 94.0 115 41.7
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 3.5e-17 93.6 155 33.5
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 1.0e-16 92.0 211 29.9
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 1.0e-16 92.0 216 30.6
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 1.3e-14 85.1 278 28.4
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 2.8e-14 84.0 103 38.8
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 4.1e-13 80.1 86 41.9
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 9.4e-10 68.9 109 37.6
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 1.2e-09 68.6 108 37.0
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 2.1e-09 67.8 108 35.2
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 1.4e-08 65.1 108 34.3
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 1.4e-08 65.1 108 34.3
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 1.8e-08 64.7 152 31.6
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 2.3e-08 64.3 109 35.8
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 2.3e-08 64.3 109 35.8
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 8.8e-08 62.4 62 48.4
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 1.5e-07 61.6 104 35.6
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 2.2e-06 57.8 100 33.0
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 2.2e-06 57.8 100 33.0
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 4.8e-06 56.6 98 33.7


User provided reference genes

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