Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009584 Vanilla planifolia HOM05D007629 ORTHO05D009511 2.3e-57 225.7 144 100.0
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.4e-11 73.6 128 36.7
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 9.3e-11 70.9 133 37.6
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 7.9e-10 67.8 142 38.7
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.0e-09 67.4 126 34.1
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 1.5e-08 63.5 133 35.3
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.9e-08 63.2 125 35.2
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 3.3e-08 62.4 132 34.1
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 5.6e-08 61.6 136 35.3
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 9.6e-08 60.8 128 34.4
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 2.1e-07 59.7 150 32.0
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 2.1e-07 59.7 126 32.5
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 2.1e-07 59.7 135 35.6
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 2.8e-07 59.3 129 36.4
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 2.8e-07 59.3 126 34.1
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 3.7e-07 58.9 129 36.4
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 6.2e-07 58.2 141 34.8
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 8.1e-07 57.8 95 36.8
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.4e-06 57.0 125 32.8
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 1.4e-06 57.0 132 35.6
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 1.8e-06 56.6 130 33.1
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 3.1e-06 55.8 138 30.4
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 3.1e-06 55.8 73 46.6
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 6.9e-06 54.7 153 33.3
Os03g0623100 Oryza sativa ssp. japonica HOM05D064474 ORTHO05D009511 9.0e-06 54.3 152 46.1


User provided reference genes

Program Settings