Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 4.1e-104 381.3 183 100.0
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 9.4e-101 370.2 184 97.3
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 2.9e-57 225.7 189 57.7
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 5.2e-51 204.9 189 54.5
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.5e-50 203.4 186 58.1
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 4.4e-50 201.8 189 56.1
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.3e-49 200.3 197 52.8
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 4.9e-49 198.4 185 56.8
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 1.9e-48 196.4 185 53.5
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 4.1e-48 195.3 187 55.6
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.2e-47 193.7 187 54.0
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.2e-47 193.7 187 55.1
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.2e-47 193.7 187 54.0
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.6e-47 193.4 183 51.9
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 4.6e-47 191.8 187 52.9
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 6.0e-47 191.4 188 51.6
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 7.8e-47 191.0 186 55.4
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.0e-46 190.7 184 54.3
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.0e-46 190.7 185 54.6
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.3e-46 190.3 185 51.9
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.7e-46 189.9 187 54.0
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.3e-46 189.5 187 51.9
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 3.0e-46 189.1 184 51.1
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 5.1e-46 188.3 187 50.8
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 8.7e-46 187.6 185 53.5
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 1.1e-45 187.2 187 52.4
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 1.1e-45 187.2 189 51.9
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.5e-45 186.0 185 54.6
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 3.3e-45 185.7 186 52.7
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 3.3e-45 185.7 164 54.3
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 3.3e-45 185.7 189 52.9
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 4.3e-45 185.3 185 51.4
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 7.3e-45 184.5 185 50.8
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 7.3e-45 184.5 187 51.3
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 7.3e-45 184.5 191 52.9
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 9.6e-45 184.1 187 50.3
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 9.6e-45 184.1 184 48.9
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 9.6e-45 184.1 186 52.7
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 1.2e-44 183.7 185 51.9
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.6e-44 183.3 189 50.8
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 2.8e-44 182.6 137 64.2
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 3.6e-44 182.2 137 62.0
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 3.6e-44 182.2 137 62.8
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 4.7e-44 181.8 137 63.5
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.1e-43 180.6 190 50.5
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.8e-43 179.9 146 56.8
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 2.4e-43 179.5 183 49.7
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 3.1e-43 179.1 186 48.9
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 5.2e-43 178.3 187 51.3
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 9.0e-43 177.6 137 60.6
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 1.5e-42 176.8 187 50.3
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 2.6e-42 176.0 187 51.3
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 2.6e-42 176.0 183 48.1
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 3.4e-42 175.6 190 52.6
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 5.8e-42 174.9 186 50.0
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 5.8e-42 174.9 186 50.5
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 5.8e-42 174.9 185 49.2
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 7.6e-42 174.5 168 54.2
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 7.6e-42 174.5 183 50.8
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 9.9e-42 174.1 184 52.7
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 9.9e-42 174.1 171 52.0
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.3e-41 173.7 137 60.6
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 2.2e-41 172.9 187 50.3
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 3.8e-41 172.2 137 59.9
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 6.4e-41 171.4 137 60.6
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.9e-40 169.9 176 48.9
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.9e-40 169.9 190 50.5
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 2.4e-40 169.5 137 59.1
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.2e-40 169.1 175 50.9
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.2e-40 169.1 177 51.4
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 4.2e-40 168.7 193 46.1
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 4.2e-40 168.7 177 51.4
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 7.1e-40 167.9 186 46.2
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 9.3e-40 167.5 176 48.3
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 1.6e-39 166.8 137 57.7
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 6.0e-39 164.9 136 55.1
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 6.0e-39 164.9 194 45.9
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 7.8e-39 164.5 196 46.4
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 7.8e-39 164.5 187 46.5
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 1.0e-38 164.1 147 55.1
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 1.3e-38 163.7 162 49.4
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 1.3e-38 163.7 134 55.2
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.3e-38 162.9 187 47.1
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 2.3e-38 162.9 134 55.2
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 6.6e-38 161.4 146 55.5
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 1.1e-35 154.1 168 46.4
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 3.1e-35 152.5 240 39.2
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 1.2e-34 150.6 116 60.3
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 5.8e-34 148.3 132 56.8
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 2.4e-32 142.9 116 57.8
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 9.3e-32 141.0 152 41.4
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 2.7e-31 139.4 119 56.3
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 3.5e-31 139.0 146 45.9
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 7.4e-29 131.3 125 52.8
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 1.4e-27 127.1 141 51.1
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.2e-26 124.0 140 40.0
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 2.9e-25 119.4 122 49.2
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 1.8e-19 100.1 128 46.1
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 2.0e-18 96.7 115 45.2
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 7.6e-18 94.7 88 58.0
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 2.2e-17 93.2 98 48.0
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 6.0e-15 85.1 80 55.0
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 5.7e-13 78.6 67 55.2
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.1e-11 74.3 57 59.6
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 1.8e-06 57.0 74 47.3
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 1.8e-06 57.0 37 70.3


User provided reference genes

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