Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 4.1e-147 524.6 254 100.0
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.0e-145 520.0 254 99.2
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.7e-82 308.5 247 59.9
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.8e-81 306.6 247 59.9
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 5.7e-80 301.6 247 59.5
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 5.7e-80 301.6 247 60.3
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 2.8e-79 299.3 246 59.3
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 4.8e-79 298.5 250 58.4
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 1.1e-78 297.4 247 57.5
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 1.1e-78 297.4 247 55.9
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 9.1e-78 294.3 249 56.6
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 9.1e-78 294.3 248 56.5
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 9.1e-78 294.3 247 58.3
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 1.2e-77 293.9 250 56.4
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 1.6e-77 293.5 250 57.6
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 1.6e-77 293.5 245 55.9
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 5.9e-77 291.6 249 55.8
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 5.9e-77 291.6 250 56.8
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 1.0e-76 290.8 247 56.7
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 1.0e-76 290.8 247 56.3
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 1.0e-76 290.8 247 55.9
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 1.3e-76 290.4 252 55.6
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 1.7e-76 290.0 250 56.0
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 1.7e-76 290.0 246 56.5
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 1.7e-76 290.0 247 57.5
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 3.8e-76 288.9 247 55.5
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 3.8e-76 288.9 247 55.5
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 3.8e-76 288.9 248 54.0
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.0e-76 288.5 250 56.4
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 5.0e-76 288.5 247 57.1
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 6.5e-76 288.1 247 56.7
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 1.1e-75 287.3 247 55.5
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 1.1e-75 287.3 250 55.6
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 1.1e-75 287.3 249 55.4
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 1.5e-75 287.0 247 57.1
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 1.9e-75 286.6 249 53.4
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.9e-75 286.6 250 56.0
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.9e-75 286.6 250 56.0
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 3.2e-75 285.8 249 55.0
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 3.2e-75 285.8 251 55.4
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 3.2e-75 285.8 247 55.1
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 4.2e-75 285.4 250 56.8
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 4.2e-75 285.4 249 55.0
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 4.2e-75 285.4 247 55.1
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 4.2e-75 285.4 247 55.1
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 4.2e-75 285.4 248 54.4
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 7.2e-75 284.6 247 56.7
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 9.4e-75 284.3 247 54.7
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 1.2e-74 283.9 247 55.5
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 2.1e-74 283.1 249 56.6
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.1e-74 283.1 249 56.6
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 2.1e-74 283.1 247 54.3
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 2.1e-74 283.1 250 56.8
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 2.7e-74 282.7 254 55.1
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 2.7e-74 282.7 249 54.6
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 2.7e-74 282.7 247 54.3
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 3.6e-74 282.3 247 54.7
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 4.7e-74 282.0 255 54.1
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 4.7e-74 282.0 247 55.9
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 8.0e-74 281.2 249 56.2
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 8.0e-74 281.2 249 55.8
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 8.0e-74 281.2 247 56.7
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 1.0e-73 280.8 246 54.9
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 1.4e-73 280.4 249 53.4
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 1.8e-73 280.0 246 53.7
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 4.0e-73 278.9 257 52.9
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.2e-73 278.5 247 56.3
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 5.2e-73 278.5 251 56.2
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 6.8e-73 278.1 249 54.6
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 8.8e-73 277.7 257 52.5
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 2.0e-72 276.6 246 56.9
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 2.6e-72 276.2 249 53.4
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 2.6e-72 276.2 249 53.0
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 5.7e-72 275.0 248 55.2
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 7.5e-72 274.6 247 54.7
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 7.5e-72 274.6 247 55.9
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 9.8e-72 274.2 249 54.2
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 9.8e-72 274.2 248 54.8
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 9.8e-72 274.2 248 54.8
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 2.2e-71 273.1 248 54.4
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 3.7e-71 272.3 251 53.4
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 4.8e-71 271.9 247 54.3
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 4.8e-71 271.9 248 54.4
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 8.3e-71 271.2 245 54.7
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 1.1e-70 270.8 251 53.0
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 1.1e-70 270.8 251 53.0
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 1.1e-70 270.8 251 53.0
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 1.1e-70 270.8 251 53.0
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 1.1e-70 270.8 249 53.0
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 1.4e-70 270.4 248 53.6
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 1.4e-70 270.4 248 53.6
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 2.4e-70 269.6 249 53.4
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 4.1e-70 268.9 251 52.6
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 4.1e-70 268.9 248 53.6
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 5.4e-70 268.5 248 53.2
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 5.4e-70 268.5 249 52.2
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.2e-69 267.3 249 52.2
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 1.5e-67 260.4 247 51.0
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 2.1e-66 256.5 259 51.0
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 6.8e-65 251.5 250 51.6
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 5.7e-64 248.4 228 53.1
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 1.6e-58 230.3 246 48.8
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 8.0e-58 228.0 238 48.7
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 8.9e-57 224.6 196 54.6
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 7.5e-56 221.5 252 45.6
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 3.3e-51 206.1 251 43.8
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 1.4e-49 200.7 268 41.4
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.2e-40 171.0 151 52.3
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.9e-38 163.7 263 41.4
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 1.6e-34 150.6 282 37.2
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 4.7e-34 149.1 135 54.8
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 1.7e-31 140.6 111 58.6
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 4.7e-26 122.5 98 57.1
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 2.2e-23 113.6 95 52.6
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 1.6e-18 97.4 71 57.7
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 1.6e-13 80.9 58 58.6
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 4.6e-13 79.3 90 46.7
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 3.9e-12 76.3 154 35.7
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 2.4e-09 67.0 48 54.2
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 3.1e-09 66.6 115 33.9
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 3.4e-08 63.2 42 69.0
AagrBONN_evm.TU.Sc2ySwM_368.1069 Anthoceros agrestis HOM05D027965 ORTHO05D007451 1.9e-06 57.4 239 26.8
Mapoly0033s0082 Marchantia polymorpha HOM05D027965 ORTHO05D048753 7.1e-06 55.5 123 29.3


User provided reference genes

Program Settings