Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 0.0e+00 1327.4 700 100.0
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 5.9e-228 794.7 738 62.1
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 3.8e-227 792.0 726 63.8
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.9e-226 789.6 717 62.5
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 3.6e-225 785.4 723 62.0
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 6.1e-225 784.6 716 61.9
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 1.0e-224 783.9 720 61.1
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 8.8e-224 780.8 721 60.9
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 8.8e-224 780.8 728 62.5
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 2.4e-221 772.7 725 61.2
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 3.1e-221 772.3 719 60.1
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 5.4e-221 771.5 731 61.0
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 7.0e-221 771.2 727 61.6
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 2.0e-220 769.6 718 60.2
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 2.0e-220 769.6 721 61.7
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 4.5e-220 768.5 726 62.0
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 7.7e-220 767.7 720 59.4
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.0e-219 767.3 721 59.2
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 3.8e-219 765.4 733 61.5
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 5.0e-219 765.0 730 60.5
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 5.0e-219 765.0 725 58.8
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 8.6e-219 764.2 724 59.3
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.5e-218 763.5 733 59.9
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 1.5e-218 763.5 723 61.0
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.9e-218 763.1 722 60.1
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.5e-218 762.7 723 60.4
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.3e-218 762.3 723 60.9
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 3.3e-218 762.3 718 58.9
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 5.6e-218 761.5 723 61.1
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 5.6e-218 761.5 738 60.8
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 9.5e-218 760.8 723 60.6
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 1.6e-217 760.0 723 60.4
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.6e-217 758.8 723 60.3
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.8e-216 756.5 713 60.0
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 2.4e-213 746.1 725 58.6
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 4.1e-213 745.3 713 59.6
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 5.4e-213 745.0 725 57.1
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.6e-212 743.4 737 59.4
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 1.3e-211 740.3 730 57.7
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 1.3e-211 740.3 706 59.5
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 1.7e-211 740.0 715 58.5
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.3e-211 739.6 701 59.3
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.3e-211 739.6 721 58.5
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 8.6e-211 737.6 713 59.5
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 1.9e-210 736.5 724 58.1
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.5e-210 736.1 712 58.1
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 2.5e-210 736.1 727 59.1
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 4.3e-210 735.3 797 55.0
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 5.6e-210 734.9 729 59.7
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.6e-209 733.4 700 59.4
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 2.8e-209 732.6 730 57.8
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 4.7e-209 731.9 729 59.7
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 6.2e-209 731.5 730 57.0
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 5.2e-208 728.4 739 58.9
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 6.8e-208 728.0 728 57.8
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 6.8e-208 728.0 721 56.9
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 8.9e-208 727.6 725 59.2
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 3.4e-207 725.7 726 59.0
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.7e-206 723.4 706 58.2
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.2e-206 723.0 706 58.8
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 2.9e-206 722.6 704 57.2
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 3.7e-206 722.2 728 59.1
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 5.4e-205 718.4 717 57.9
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 7.8e-204 714.5 723 57.4
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.0e-203 714.1 722 57.9
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.7e-203 713.4 718 57.5
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.0e-203 711.8 706 57.8
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 8.6e-203 711.1 730 56.8
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 4.3e-202 708.8 737 56.0
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 1.1e-200 704.1 722 57.6
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 5.2e-200 701.8 720 55.4
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 5.2e-200 701.8 694 58.6
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 2.2e-198 696.4 731 57.2
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 2.2e-198 696.4 715 56.6
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 7.1e-197 691.4 946 47.7
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.2e-196 690.6 703 57.5
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 2.7e-196 689.5 715 56.8
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 4.6e-196 688.7 633 61.3
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 3.6e-193 679.1 727 54.5
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 5.2e-192 675.2 717 55.5
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 1.3e-190 670.6 733 54.8
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 2.1e-188 663.3 715 55.7
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 3.9e-187 659.1 717 53.7
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 6.6e-187 658.3 723 53.3
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 4.3e-186 655.6 766 52.1
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 4.3e-186 655.6 717 53.1
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 9.6e-186 654.4 718 53.6
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 2.8e-185 652.9 726 54.7
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 3.6e-185 652.5 718 53.1
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 1.5e-183 647.1 717 52.4
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 4.4e-183 645.6 721 54.4
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 5.8e-183 645.2 931 46.2
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 3.8e-182 642.5 738 54.7
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 2.4e-181 639.8 742 51.3
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 9.6e-170 601.3 593 58.2
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 8.1e-169 598.2 564 62.1
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.3e-166 590.9 626 54.8
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.0e-163 579.7 623 54.6
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 5.6e-162 575.5 586 57.2
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.4e-149 534.3 546 57.1
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 8.7e-147 525.0 600 55.0
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 2.6e-143 513.5 701 45.8
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 1.1e-141 508.1 533 54.2
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 2.0e-138 497.3 600 50.5
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 3.1e-128 463.4 518 55.8
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 1.7e-126 457.6 773 38.8
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 3.3e-122 443.4 789 37.3
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 2.5e-109 400.6 704 37.6
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 4.9e-97 359.8 275 68.4
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 4.1e-96 356.7 299 64.5
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 4.4e-82 310.1 427 46.6
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 1.7e-65 255.0 462 40.3
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 9.6e-61 239.2 432 38.7
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 3.0e-54 217.6 194 60.8
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.2e-47 195.7 293 44.4
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.6e-47 195.3 182 56.0
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 1.3e-46 192.2 155 73.5
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 2.6e-42 177.9 154 59.7
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.0e-38 166.0 129 76.7
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 7.4e-37 159.8 133 71.4
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.4e-35 155.6 128 68.0
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 9.0e-35 152.9 273 39.9
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 8.2e-28 129.8 142 53.5
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 7.7e-26 123.2 100 64.0
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 1.9e-24 118.6 107 60.7
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 1.3e-20 105.9 131 51.1
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 1.0e-17 96.3 105 51.4
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 3.6e-07 61.2 137 32.1
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 5.2e-06 57.4 37 78.4
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 5.2e-06 57.4 79 48.1


User provided reference genes

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