Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009317 Vanilla planifolia HOM05D001174 ORTHO05D001003 1.1e-59 233.0 110 100.0
Os09g0449000 Oryza sativa ssp. japonica HOM05D001174 ORTHO05D001003 4.7e-23 111.3 101 55.4
Zm00001eb314550 Zea mays HOM05D001174 ORTHO05D001003 3.8e-20 101.7 101 51.5
EL10Ac4g09712 Beta vulgaris HOM05D001174 ORTHO05D001003 4.6e-18 94.7 94 47.9
GSVIVG01011588001 Vitis vinifera HOM05D001174 ORTHO05D001003 2.3e-17 92.4 91 46.2
AUR62000584 Chenopodium quinoa HOM05D001174 ORTHO05D001003 6.6e-17 90.9 94 44.7
AUR62006941 Chenopodium quinoa HOM05D001174 ORTHO05D001003 6.6e-17 90.9 94 44.7
Ah.02g118110 Amaranthus hybridus HOM05D001174 ORTHO05D001003 1.9e-16 89.4 94 45.7
MBI19_g27701_MAGBIO Magnolia biondii HOM05D001174 ORTHO05D001003 5.6e-16 87.8 91 45.1
Sc16g0009930 Simmondsia chinensis HOM05D001174 ORTHO05D001003 1.2e-15 86.7 88 47.7
Aqoxy3G03998 Aquilegia oxysepala HOM05D001174 ORTHO05D001003 4.7e-15 84.7 92 40.2
Duzib205G0700 Durio zibethinus HOM05D001174 ORTHO05D001003 4.7e-15 84.7 96 44.8
TAR629G3084 Trochodendron aralioides HOM05D001174 ORTHO05D001003 6.2e-15 84.3 91 41.8
DCAR_026824 Daucus carota HOM05D001174 ORTHO05D001003 1.4e-14 83.2 93 45.2
PSO063G0042 Papaver somniferum HOM05D001174 ORTHO05D001003 1.4e-14 83.2 91 40.7
PSO832G0326 Papaver somniferum HOM05D001174 ORTHO05D001003 2.4e-14 82.4 91 40.7
Cc11_g05640 Coffea canephora HOM05D001174 ORTHO05D001003 3.1e-14 82.0 91 45.1
TWI34G0742 Tripterygium wilfordii HOM05D001174 ORTHO05D001003 3.1e-14 82.0 92 43.5
CANSAT78G1402 Cannabis sativa HOM05D001174 ORTHO05D001003 1.2e-13 80.1 96 43.8
ECA233G6154 Erigeron canadensis HOM05D001174 ORTHO05D001003 1.2e-13 80.1 91 44.0
Migut.E00566 Erythranthe guttata HOM05D001174 ORTHO05D001003 1.2e-13 80.1 97 46.4
Prupe.1G338600 Prunus persica HOM05D001174 ORTHO05D001003 1.5e-13 79.7 97 44.3
Nn4g24573 Nelumbo nucifera HOM05D001174 ORTHO05D001003 2.6e-13 79.0 91 37.4
Cfa022224 Carpinus fangiana HOM05D001174 ORTHO05D001003 3.4e-13 78.6 97 43.3
Hma1.2p1_1525F.1_g288890 Hydrangea macrophylla HOM05D001174 ORTHO05D001003 3.4e-13 78.6 91 42.9
Thecc.03G278400 Theobroma cacao HOM05D001174 ORTHO05D001003 5.8e-13 77.8 92 43.5
Ciclev10017892m.g Citrus clementina HOM05D001174 ORTHO05D001003 7.6e-13 77.4 92 43.5
QL03p039232 Quercus lobata HOM05D001174 ORTHO05D001003 7.6e-13 77.4 91 40.7
CSS0039299 Camellia sinensis var. sinensis HOM05D001174 ORTHO05D001003 9.9e-13 77.0 97 42.3
FAN17G2170 Fragaria x ananassa HOM05D001174 ORTHO05D001003 2.2e-12 75.9 95 42.1
CAN.G458.17 Capsicum annuum HOM05D001174 ORTHO05D001003 3.8e-12 75.1 100 40.0
FAN22G1627 Fragaria x ananassa HOM05D001174 ORTHO05D001003 3.8e-12 75.1 99 42.4
Lsat_1_v5_gn_8_34381 Lactuca sativa HOM05D001174 ORTHO05D001003 3.8e-12 75.1 91 42.9
Potri.010G101300 Populus trichocarpa HOM05D001174 ORTHO05D001003 3.8e-12 75.1 91 39.6
Sabra10G0073900 Salix brachista HOM05D001174 ORTHO05D001003 3.8e-12 75.1 91 41.8
ATR0598G035 Amborella trichopoda HOM05D001174 ORTHO05D001003 4.9e-12 74.7 101 41.6
arahy.Tifrunner.gnm1.ann1.TL38SF Arachis hypogaea HOM05D001174 ORTHO05D001003 4.9e-12 74.7 96 37.5
arahy.Tifrunner.gnm1.ann1.0IX9E9 Arachis hypogaea HOM05D001174 ORTHO05D001003 6.4e-12 74.3 96 37.5
Nitab4.5_0001822g0120 Nicotiana tabacum HOM05D001174 ORTHO05D001003 6.4e-12 74.3 96 39.6
Lalb_Chr17g0340691 Lupinus albus HOM05D001174 ORTHO05D001003 8.4e-12 73.9 96 36.5
Sed0019363 Sechium edule HOM05D001174 ORTHO05D001003 1.1e-11 73.6 100 45.0
Oeu006316.1 Olea europaea HOM05D001174 ORTHO05D001003 1.4e-11 73.2 90 40.0
RcHm_v2.0_Chr4g0445351 Rosa chinensis HOM05D001174 ORTHO05D001003 1.4e-11 73.2 95 41.1
Gohir.A12G228200 Gossypium hirsutum HOM05D001174 ORTHO05D001003 1.9e-11 72.8 104 39.4
Peaxi162Scf00025g00014 Petunia axillaris HOM05D001174 ORTHO05D001003 1.9e-11 72.8 92 42.4
MELO3C020044.2 Cucumis melo HOM05D001174 ORTHO05D001003 3.2e-11 72.0 89 46.1
Gohir.D12G230700 Gossypium hirsutum HOM05D001174 ORTHO05D001003 3.2e-11 72.0 104 39.4
Gorai.008G246900 Gossypium raimondii HOM05D001174 ORTHO05D001003 3.2e-11 72.0 104 39.4
Nitab4.5_0020917g0020 Nicotiana tabacum HOM05D001174 ORTHO05D001003 3.2e-11 72.0 96 38.5
unitig_699.g19543 Utricularia gibba HOM05D001174 ORTHO05D001003 3.2e-11 72.0 92 44.6
Glyma.02G107600 Glycine max HOM05D001174 ORTHO05D001003 9.3e-11 70.5 96 34.4
SMO356G0690 Selaginella moellendorffii HOM05D001174 ORTHO05D001003 1.2e-10 70.1 91 37.4
VMungo1215G3405 Vigna mungo HOM05D001174 ORTHO05D001003 2.1e-10 69.3 90 37.8
Phvul.002G085000 Phaseolus vulgaris HOM05D001174 ORTHO05D001003 3.5e-10 68.6 90 37.8
CsaV3_5G013130 Cucumis sativus L. HOM05D001174 ORTHO05D001003 4.6e-10 68.2 89 44.9
SEGI_22597 Sequoiadendron giganteum HOM05D001174 ORTHO05D001003 3.0e-09 65.5 95 41.1
ClCG00G004060 Citrullus lanatus HOM05D001174 ORTHO05D001003 3.9e-09 65.1 99 43.4
ClCG11G001060 Citrullus lanatus HOM05D001174 ORTHO05D001003 3.9e-09 65.1 99 43.4
ClCG11G001090 Citrullus lanatus HOM05D001174 ORTHO05D001003 3.9e-09 65.1 99 43.4
SEGI_30421 Sequoiadendron giganteum HOM05D001174 ORTHO05D001003 5.1e-09 64.7 92 39.1
Pp3c9_20410 Physcomitrium patens HOM05D001174 ORTHO05D001003 7.3e-08 60.8 91 37.4
CBR_g137 Chara braunii HOM05D001190 ORTHO05D001764 2.8e-07 58.9 96 35.4
Mapoly0039s0094 Marchantia polymorpha HOM05D001174 ORTHO05D001003 2.8e-07 58.9 94 33.0
Pp3c15_21830 Physcomitrium patens HOM05D001174 ORTHO05D001003 2.8e-07 58.9 91 37.4
Ciclev10007029m.g Citrus clementina HOM05D001174 ORTHO05D001003 3.6e-07 58.5 97 35.1
Prupe.3G164800 Prunus persica HOM05D001174 ORTHO05D001003 3.6e-07 58.5 97 34.0
Nn3g18430 Nelumbo nucifera HOM05D001174 ORTHO05D001003 4.8e-07 58.2 92 33.7
PSO063G2555 Papaver somniferum HOM05D001174 ORTHO05D001003 4.8e-07 58.2 103 34.0
TAR371G0619 Trochodendron aralioides HOM05D001174 ORTHO05D001003 8.1e-07 57.4 97 34.0
Aqoxy2G00632 Aquilegia oxysepala HOM05D001174 ORTHO05D001003 1.1e-06 57.0 98 34.7
MD09G1267100 Malus domestica HOM05D001174 ORTHO05D001003 1.1e-06 57.0 92 34.8
SEGI_11319 Sequoiadendron giganteum HOM05D001174 ORTHO05D001003 1.8e-06 56.2 93 37.6
Cpa.g.sc87.13 Carica papaya HOM05D001174 ORTHO05D001003 3.1e-06 55.5 92 34.8
Manes.01G121000 Manihot esculenta HOM05D001174 ORTHO05D001003 3.1e-06 55.5 92 34.8
Lalb_Chr10g0104241 Lupinus albus HOM05D001174 ORTHO05D001003 5.3e-06 54.7 97 34.0
Phvul.008G238400 Phaseolus vulgaris HOM05D001174 ORTHO05D001003 5.3e-06 54.7 97 36.1
VMungo0647G2455 Vigna mungo HOM05D001174 ORTHO05D001003 5.3e-06 54.7 97 36.1
AagrBONN_evm.TU.Sc2ySwM_362.680 Anthoceros agrestis HOM05D001174 ORTHO05D001003 6.9e-06 54.3 94 33.0
Sed0024967 Sechium edule HOM05D001174 ORTHO05D001003 6.9e-06 54.3 97 34.0


User provided reference genes

Program Settings