Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.2e-224 782.7 373 100.0
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 4.6e-78 295.8 370 46.8
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 1.1e-71 274.6 371 42.6
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 4.8e-67 259.2 357 43.7
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.4e-66 257.7 354 42.7
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 2.9e-64 250.0 369 42.8
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.3e-59 234.6 350 41.4
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 2.4e-58 230.3 352 40.9
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 6.5e-56 222.2 365 40.3
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 3.2e-55 219.9 361 40.2
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 2.7e-54 216.9 365 39.2
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 4.6e-54 216.1 354 39.5
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 6.7e-53 212.2 363 40.2
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 1.1e-52 211.5 374 39.3
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 8.2e-51 205.3 366 39.9
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.1e-50 204.9 351 39.3
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.4e-50 204.5 348 37.6
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 2.4e-50 203.8 343 41.7
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 3.1e-50 203.4 431 34.1
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 4.1e-50 203.0 400 38.2
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 1.5e-49 201.1 342 37.1
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 4.5e-49 199.5 376 38.0
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.0e-48 198.4 366 38.0
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 1.7e-48 197.6 353 37.7
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 2.2e-48 197.2 392 35.5
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 6.5e-48 195.7 357 38.1
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 6.5e-48 195.7 383 36.3
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 8.5e-48 195.3 385 37.4
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 1.1e-47 194.9 355 37.7
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 1.4e-47 194.5 361 37.7
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 5.5e-47 192.6 344 36.9
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 1.6e-46 191.0 371 37.5
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 2.1e-46 190.7 351 35.6
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.7e-46 190.3 355 37.7
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 3.6e-46 189.9 345 38.8
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 4.6e-46 189.5 345 36.2
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 1.8e-45 187.6 369 36.9
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.3e-45 187.2 393 35.6
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.0e-45 186.8 355 37.5
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 3.0e-45 186.8 355 37.5
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 3.9e-45 186.4 363 36.4
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 5.1e-45 186.0 353 37.4
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 5.1e-45 186.0 351 37.3
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 5.1e-45 186.0 342 36.5
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 6.7e-45 185.7 343 37.0
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 1.5e-44 184.5 368 37.5
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 2.5e-44 183.7 358 34.9
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 3.3e-44 183.3 343 37.3
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 7.4e-44 182.2 353 37.7
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 9.7e-44 181.8 381 35.7
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 2.2e-43 180.6 346 35.0
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 3.7e-43 179.9 360 35.3
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 1.4e-42 177.9 340 34.4
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 3.1e-42 176.8 352 37.8
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 3.1e-42 176.8 362 34.8
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 5.3e-42 176.0 349 38.1
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 6.9e-42 175.6 346 37.9
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 5.0e-40 169.5 353 36.5
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 5.5e-39 166.0 341 32.6
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 2.1e-38 164.1 341 33.1
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 6.1e-38 162.5 345 33.0
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 6.7e-37 159.1 351 31.9
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 2.0e-36 157.5 361 34.3
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 4.4e-36 156.4 235 38.7
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 7.4e-36 155.6 341 33.1
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 1.7e-35 154.5 352 30.4
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 2.2e-35 154.1 328 34.1
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 2.8e-35 153.7 374 31.6
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.2e-33 148.3 212 44.3
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 1.5e-33 147.9 343 30.6
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 2.0e-33 147.5 193 41.5
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 7.7e-33 145.6 238 37.4
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.3e-32 144.8 249 39.0
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.7e-32 144.4 200 42.0
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 5.0e-32 142.9 256 38.3
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 6.5e-32 142.5 354 30.8
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 1.1e-31 141.7 220 40.9
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 1.1e-31 141.7 399 31.3
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 2.5e-31 140.6 211 41.7
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 2.5e-31 140.6 159 47.2
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 4.2e-31 139.8 233 37.3
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 1.6e-30 137.9 233 37.3
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 2.1e-30 137.5 233 37.3
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 1.4e-29 134.8 381 32.3
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 3.0e-29 133.7 351 32.8
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 1.5e-28 131.3 191 39.8
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 6.3e-27 125.9 201 39.8
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 5.3e-26 122.9 357 30.0
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 7.0e-26 122.5 263 36.5
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 1.6e-25 121.3 161 42.2
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 5.0e-24 116.3 320 30.6
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 3.5e-17 93.6 128 45.3
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 1.0e-16 92.0 85 54.1
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 1.2e-14 85.1 234 30.8
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 1.8e-13 81.3 62 54.8
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 3.0e-13 80.5 175 35.4
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 5.2e-13 79.7 61 55.7
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 5.7e-12 76.3 75 48.0
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 7.5e-12 75.9 79 41.8
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 3.1e-10 70.5 315 25.4
Thecc.08G119000 Theobroma cacao HOM05D004492 ORTHO05D005602 2.1e-06 57.8 74 36.5
Thecc.04G298100 Theobroma cacao HOM05D006673 ORTHO05D008458 6.1e-06 56.2 313 24.0


User provided reference genes

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