Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009293 Vanilla planifolia HOM05D000966 ORTHO05D007323 1.7e-111 406.0 199 100.0
TAR381G1161 Trochodendron aralioides HOM05D000966 ORTHO05D007323 4.2e-30 135.6 106 64.2
Atru.chr13.2052 Acer truncatum HOM05D000966 ORTHO05D007323 1.4e-28 130.6 107 60.7
ClCG08G008820 Citrullus lanatus HOM05D000966 ORTHO05D007323 3.4e-27 125.9 106 57.5
Zm00001eb082920 Zea mays HOM05D000966 ORTHO05D007323 5.7e-27 125.2 101 55.4
MD05G1031500 Malus domestica HOM05D000966 ORTHO05D007323 7.5e-27 124.8 105 58.1
Os04g0429100 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D007323 7.5e-27 124.8 100 61.0
CARHR070260 Cardamine hirsuta HOM05D000966 ORTHO05D007323 9.8e-27 124.4 102 56.9
Cfa018294 Carpinus fangiana HOM05D000966 ORTHO05D007323 1.3e-26 124.0 105 60.0
MD10G1033100 Malus domestica HOM05D000966 ORTHO05D007323 1.3e-26 124.0 105 57.1
MELO3C008329.2 Cucumis melo HOM05D000966 ORTHO05D007323 2.8e-26 122.9 106 54.7
Nn3g18699 Nelumbo nucifera HOM05D000966 ORTHO05D007323 3.7e-26 122.5 111 55.9
Sed0009464 Sechium edule HOM05D000966 ORTHO05D007323 3.7e-26 122.5 111 52.3
TWI34G1291 Tripterygium wilfordii HOM05D000966 ORTHO05D007323 1.1e-25 120.9 105 58.1
arahy.Tifrunner.gnm1.ann1.Z2GQ5K Arachis hypogaea HOM05D000966 ORTHO05D007323 1.4e-25 120.6 125 52.0
CsaV3_6G005070 Cucumis sativus L. HOM05D000966 ORTHO05D007323 1.8e-25 120.2 106 53.8
arahy.Tifrunner.gnm1.ann1.83HUSC Arachis hypogaea HOM05D000966 ORTHO05D007323 2.4e-25 119.8 125 52.0
Carub.0002s2362 Capsella rubella HOM05D000966 ORTHO05D007323 2.4e-25 119.8 108 53.7
Hma1.2p1_0081F.1_g042500 Hydrangea macrophylla HOM05D000966 ORTHO05D007323 3.1e-25 119.4 107 54.2
Cpa.g.sc49.86 Carica papaya HOM05D000966 ORTHO05D007323 4.1e-25 119.0 110 53.6
CDE12G0409 Ceratophyllum demersum HOM05D000966 ORTHO05D007323 4.1e-25 119.0 101 59.4
Thhalv10018466m.g Eutrema salsugineum HOM05D000966 ORTHO05D007323 4.1e-25 119.0 106 52.8
VMungo0720G0673 Vigna mungo HOM05D000966 ORTHO05D007323 4.1e-25 119.0 105 57.1
Glyma.10G222800 Glycine max HOM05D000966 ORTHO05D007323 5.4e-25 118.6 105 56.2
Ciclev10000952m.g Citrus clementina HOM05D000966 ORTHO05D007323 9.2e-25 117.9 103 54.4
Duzib116G0132 Durio zibethinus HOM05D000966 ORTHO05D007323 9.2e-25 117.9 116 53.4
Medtr1g098370 Medicago truncatula HOM05D000966 ORTHO05D007323 9.2e-25 117.9 103 58.3
GSVIVG01034572001 Vitis vinifera HOM05D000966 ORTHO05D007323 9.2e-25 117.9 104 55.8
BcaC08g47221 Brassica carinata HOM05D000966 ORTHO05D007323 1.6e-24 117.1 117 48.7
Phvul.007G082400 Phaseolus vulgaris HOM05D000966 ORTHO05D007323 2.0e-24 116.7 105 56.2
Glyma.20G168900 Glycine max HOM05D000966 ORTHO05D007323 2.7e-24 116.3 105 55.2
Sp5g31860 Schrenkiella parvula HOM05D000966 ORTHO05D007323 2.7e-24 116.3 106 52.8
BcaC08g47180 Brassica carinata HOM05D001345 ORTHO05D001190 3.5e-24 115.9 101 54.5
CiPaw.15G013800 Carya illinoinensis HOM05D000966 ORTHO05D007323 3.5e-24 115.9 105 55.2
Lalb_Chr02g0141501 Lupinus albus HOM05D000966 ORTHO05D007323 3.5e-24 115.9 105 53.3
AL2G36860 Arabidopsis lyrata HOM05D000966 ORTHO05D007323 4.5e-24 115.5 102 53.9
AT1G76710 Arabidopsis thaliana HOM05D000966 ORTHO05D007323 4.5e-24 115.5 102 53.9
Ca_10671_v3 Cicer arietinum L. HOM05D000966 ORTHO05D007323 4.5e-24 115.5 111 54.1
Prupe.8G038500 Prunus persica HOM05D000966 ORTHO05D007323 4.5e-24 115.5 102 56.9
Dinv25888 Davidia involucrata HOM05D000044 ORTHO05D002853 7.8e-24 114.8 100 56.0
A07p42370 Brassica napus HOM05D000966 ORTHO05D007323 1.7e-23 113.6 100 55.0
Potri.005G195400 Populus trichocarpa HOM05D000966 ORTHO05D007323 1.7e-23 113.6 100 55.0
A07p42380 Brassica napus HOM05D000966 ORTHO05D007323 2.3e-23 113.2 100 55.0
Medtr1g098000 Medicago truncatula HOM05D000966 ORTHO05D007323 2.9e-23 112.8 103 55.3
PSO170G0768 Papaver somniferum HOM05D000966 ORTHO05D007323 2.9e-23 112.8 111 52.3
RcHm_v2.0_Chr1g0329491 Rosa chinensis HOM05D000966 ORTHO05D007323 2.9e-23 112.8 111 49.5
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 2.9e-23 112.8 113 51.3
FAN03G0153 Fragaria x ananassa HOM05D000966 ORTHO05D007323 3.8e-23 112.5 103 51.5
PGR042G2706 Punica granatum HOM05D000966 ORTHO05D007323 3.8e-23 112.5 97 57.7
Gohir.A06G111200 Gossypium hirsutum HOM05D000966 ORTHO05D007323 8.6e-23 111.3 105 51.4
Psat6g191160 Pisum sativum HOM05D000966 ORTHO05D007323 8.6e-23 111.3 98 56.1
Sabra05G0148900 Salix brachista HOM05D000966 ORTHO05D007323 8.6e-23 111.3 100 54.0
Aqoxy4G02511 Aquilegia oxysepala HOM05D000966 ORTHO05D007323 1.1e-22 110.9 104 51.0
Gohir.D06G115100 Gossypium hirsutum HOM05D000966 ORTHO05D007323 1.9e-22 110.2 105 50.5
Lj5g0028132 Lotus japonicus HOM05D000966 ORTHO05D007323 1.9e-22 110.2 105 52.4
TPR.G17050 Trifolium pratense HOM05D000966 ORTHO05D007323 1.9e-22 110.2 105 52.4
EL10Ac1g01592 Beta vulgaris HOM05D000966 ORTHO05D007323 2.5e-22 109.8 100 52.0
Gorai.010G131600 Gossypium raimondii HOM05D000966 ORTHO05D007323 2.5e-22 109.8 105 50.5
Ah.02g124940 Amaranthus hybridus HOM05D000966 ORTHO05D007323 3.3e-22 109.4 100 51.0
Migut.N03097 Erythranthe guttata HOM05D000966 ORTHO05D007323 3.3e-22 109.4 96 59.4
PSO700G0340 Papaver somniferum HOM05D000966 ORTHO05D007323 3.3e-22 109.4 111 50.5
Aa31LG4G6790 Aethionema arabicum HOM05D000966 ORTHO05D007323 5.6e-22 108.6 106 50.0
FAN01G0621 Fragaria x ananassa HOM05D000966 ORTHO05D007323 5.6e-22 108.6 103 49.5
AUR62026672 Chenopodium quinoa HOM05D000966 ORTHO05D007323 9.5e-22 107.8 107 48.6
Thecc.08G157600 Theobroma cacao HOM05D000966 ORTHO05D007323 9.5e-22 107.8 107 50.5
C06p50930 Brassica napus HOM05D000966 ORTHO05D007323 1.2e-21 107.5 88 56.8
SalBow6G0098 Salvia bowleyana HOM05D000966 ORTHO05D007323 1.2e-21 107.5 103 52.4
Haze_17793 Corylus avellana HOM05D000966 ORTHO05D007323 2.1e-21 106.7 73 68.5
Eucgr.F02689 Eucalyptus grandis HOM05D000966 ORTHO05D007323 2.1e-21 106.7 88 59.1
AUR62040579 Chenopodium quinoa HOM05D000966 ORTHO05D007323 2.8e-21 106.3 125 44.0
unitig_18.g30053 Utricularia gibba HOM05D000966 ORTHO05D007323 3.6e-21 105.9 117 50.4
unitig_8.g4809 Utricularia gibba HOM05D000966 ORTHO05D007323 3.6e-21 105.9 117 50.4
BolC6t40119H Brassica oleracea HOM05D000966 ORTHO05D007323 4.7e-21 105.5 127 44.1
Manes.12G141700 Manihot esculenta HOM05D000966 ORTHO05D007323 4.7e-21 105.5 100 53.0
MSTRG.22010 Avicennia marina HOM05D000966 ORTHO05D007323 6.1e-21 105.1 113 44.2
Hund26681 Selenicereus undatus HOM05D000966 ORTHO05D007323 8.0e-21 104.8 91 53.8
QL02p038471 Quercus lobata HOM05D000966 ORTHO05D007323 1.0e-20 104.4 105 50.5
Actinidia17776 Actinidia chinensis HOM05D000966 ORTHO05D007323 1.8e-20 103.6 139 41.0
DCAR_001155 Daucus carota HOM05D000966 ORTHO05D007323 1.8e-20 103.6 107 52.3
ECA233G6088 Erigeron canadensis HOM05D000966 ORTHO05D007323 2.3e-20 103.2 104 49.0
BraA07t31764Z Brassica rapa HOM05D000966 ORTHO05D007323 3.0e-20 102.8 71 66.2
HanXRQChr08g0226091 Helianthus annuus HOM05D000966 ORTHO05D007323 3.0e-20 102.8 100 50.0
ATR0584G286 Amborella trichopoda HOM05D000966 ORTHO05D007323 5.2e-20 102.1 137 41.6
CANSAT25G2301 Cannabis sativa HOM05D000966 ORTHO05D007323 5.2e-20 102.1 105 47.6
Nitab4.5_0000617g0300 Nicotiana tabacum HOM05D000966 ORTHO05D007323 8.9e-20 101.3 102 51.0
THA.LOC104812030 Tarenaya hassleriana HOM05D000966 ORTHO05D007323 8.9e-20 101.3 98 52.0
Nitab4.5_0000949g0070 Nicotiana tabacum HOM05D000966 ORTHO05D007323 9.8e-19 97.8 102 49.0
Peaxi162Scf00088g00919 Petunia axillaris HOM05D000966 ORTHO05D007323 1.3e-18 97.4 107 48.6
Peaxi162Scf01038g00145 Petunia axillaris HOM05D000966 ORTHO05D007323 1.7e-18 97.1 107 47.7
Sc20g0003630 Simmondsia chinensis HOM05D000966 ORTHO05D007323 2.2e-18 96.7 80 58.8
Lsat_1_v5_gn_8_521 Lactuca sativa HOM05D000966 ORTHO05D007323 3.7e-18 95.9 90 51.1
COL.COLO4_13799 Corchorus olitorius HOM05D000966 ORTHO05D007323 8.3e-18 94.7 75 57.3
GSVIVG01034571001 Vitis vinifera HOM05D000966 ORTHO05D007323 5.4e-17 92.0 100 46.0
CAN.G555.11 Capsicum annuum HOM05D000966 ORTHO05D007323 9.2e-17 91.3 92 50.0
Lj4C702T3 Lonicera japonica HOM05D000966 ORTHO05D007323 9.2e-17 91.3 108 44.4
Oeu020493.1 Olea europaea HOM05D000966 ORTHO05D007323 2.0e-16 90.1 98 46.9
PGSC0003DMG400010972 Solanum tuberosum HOM05D000966 ORTHO05D007323 2.7e-16 89.7 117 44.4
Sopen07g004390 Solanum pennellii HOM05D000966 ORTHO05D007323 3.5e-16 89.4 102 47.1
Rhsim06G0128000 Rhododendron simsii HOM05D000966 ORTHO05D007323 4.6e-16 89.0 78 51.3
Solyc07g008460.3 Solanum lycopersicum HOM05D000966 ORTHO05D007323 4.6e-16 89.0 92 48.9
Oeu056130.2 Olea europaea HOM05D000966 ORTHO05D007323 1.7e-15 87.0 94 47.9
Cc03_g11990 Coffea canephora HOM05D000966 ORTHO05D007323 3.3e-14 82.8 86 48.8
Cc00_g32880 Coffea canephora HOM05D000966 ORTHO05D007323 5.6e-14 82.0 86 47.7
SEGI_26212 Sequoiadendron giganteum HOM05D000966 ORTHO05D007323 4.0e-12 75.9 103 36.9
Medtr1g098030 Medicago truncatula HOM05D000966 ORTHO05D007323 3.7e-10 69.3 59 64.4
Cc03_g12000 Coffea canephora HOM05D000966 ORTHO05D007323 1.4e-09 67.4 70 48.6
ECA234G4770 Erigeron canadensis HOM05D000966 ORTHO05D007323 6.0e-08 62.0 45 66.7


User provided reference genes

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