Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 1.1e-133 479.9 243 100.0
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 3.9e-62 242.3 212 61.3
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 2.8e-60 236.1 246 53.7
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 1.1e-59 234.2 174 69.5
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 1.1e-59 234.2 185 65.4
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 1.4e-59 233.8 193 63.2
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 1.8e-59 233.4 209 56.5
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 3.1e-59 232.6 172 68.0
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 3.1e-59 232.6 243 54.3
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 4.1e-59 232.3 187 63.6
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 5.3e-59 231.9 175 67.4
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 1.5e-58 230.3 219 56.6
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 2.6e-58 229.6 155 71.0
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 3.4e-58 229.2 219 56.2
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 3.4e-58 229.2 194 63.9
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 3.4e-58 229.2 178 66.3
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 5.9e-58 228.4 190 64.2
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 1.0e-57 227.6 168 66.1
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 1.0e-57 227.6 185 64.3
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 1.3e-57 227.3 185 63.2
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 1.3e-57 227.3 158 68.4
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 2.2e-57 226.5 159 70.4
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 2.2e-57 226.5 163 68.7
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 3.8e-57 225.7 154 72.7
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 5.0e-57 225.3 185 63.8
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 6.5e-57 224.9 217 55.8
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 8.5e-57 224.6 232 52.6
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 8.5e-57 224.6 207 58.5
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 8.5e-57 224.6 187 61.0
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 8.5e-57 224.6 183 62.8
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 8.5e-57 224.6 164 67.7
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 1.1e-56 224.2 159 71.1
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 1.1e-56 224.2 184 62.5
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 1.1e-56 224.2 178 65.7
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 1.4e-56 223.8 183 62.8
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 1.4e-56 223.8 200 57.5
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 1.9e-56 223.4 156 69.9
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 1.9e-56 223.4 159 69.8
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 3.2e-56 222.6 153 71.2
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 4.2e-56 222.2 181 63.0
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 5.5e-56 221.9 169 65.1
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 7.2e-56 221.5 169 69.2
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 1.6e-55 220.3 177 64.4
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 2.1e-55 219.9 186 64.0
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 3.6e-55 219.2 163 68.1
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 4.7e-55 218.8 154 69.5
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 4.7e-55 218.8 183 62.3
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 7.9e-55 218.0 189 57.7
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 1.0e-54 217.6 177 63.3
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.0e-54 217.6 201 58.7
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 1.0e-54 217.6 185 60.5
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 1.8e-54 216.9 184 60.3
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 1.8e-54 216.9 189 60.3
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 2.3e-54 216.5 181 61.3
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 2.3e-54 216.5 171 63.2
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 2.3e-54 216.5 199 57.3
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 2.3e-54 216.5 184 59.8
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 3.9e-54 215.7 157 68.8
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 3.9e-54 215.7 176 61.9
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 5.1e-54 215.3 156 66.7
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 6.7e-54 214.9 201 55.7
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 8.8e-54 214.5 186 60.8
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 8.8e-54 214.5 176 61.9
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 8.8e-54 214.5 175 63.4
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 1.5e-53 213.8 190 60.5
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 1.5e-53 213.8 176 61.4
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 2.6e-53 213.0 178 61.8
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 3.3e-53 212.6 196 57.7
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 5.7e-53 211.8 180 59.4
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 5.7e-53 211.8 214 52.3
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 7.4e-53 211.5 218 56.0
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 9.7e-53 211.1 180 60.0
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 9.7e-53 211.1 220 52.3
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 1.3e-52 210.7 154 66.2
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 2.2e-52 209.9 156 65.4
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 6.3e-52 208.4 158 65.2
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 6.3e-52 208.4 158 65.2
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 6.3e-52 208.4 180 59.4
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 6.3e-52 208.4 180 60.0
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 8.2e-52 208.0 158 64.6
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 1.1e-51 207.6 210 54.3
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 1.8e-51 206.8 197 57.9
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 1.8e-51 206.8 156 65.4
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 1.8e-51 206.8 189 57.7
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.8e-51 206.8 218 54.6
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 3.1e-51 206.1 180 58.9
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 5.3e-51 205.3 191 57.1
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 7.0e-51 204.9 156 64.7
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 1.2e-50 204.1 156 64.7
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 1.5e-50 203.8 156 64.1
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 4.5e-50 202.2 247 48.2
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 4.5e-50 202.2 185 58.4
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 5.9e-50 201.8 156 63.5
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 1.7e-49 200.3 247 47.4
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 1.6e-47 193.7 157 61.8
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 3.6e-47 192.6 210 51.9
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 1.1e-45 187.6 146 67.1
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 9.7e-45 184.5 209 50.2
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 9.7e-45 184.5 209 50.2
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 3.7e-44 182.6 179 57.5
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.1e-43 181.0 156 60.9
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 1.2e-42 177.6 161 55.3
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 2.2e-41 173.3 134 63.4
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 2.3e-38 163.3 160 53.8
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 2.0e-37 160.2 158 55.7
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 1.7e-36 157.1 183 46.4
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 1.6e-34 150.6 174 49.4
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 7.2e-32 141.7 159 45.9
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 2.1e-31 140.2 163 44.8
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 2.0e-29 133.7 158 46.2
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 9.8e-29 131.3 93 69.9
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 1.3e-28 131.0 186 41.4
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 1.1e-27 127.9 186 40.9
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 2.9e-25 119.8 129 55.0
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 7.2e-24 115.2 81 67.9
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 4.7e-23 112.5 151 42.4
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.4e-22 110.9 81 66.7
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 1.8e-22 110.5 85 64.7
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 2.0e-21 107.1 69 73.9
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 1.3e-20 104.4 100 58.0
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 1.4e-19 100.9 100 55.0
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 3.2e-19 99.8 100 55.0
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 1.6e-18 97.4 106 51.9
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 2.9e-17 93.2 82 62.2
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 1.0e-14 84.7 93 52.7
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 8.9e-14 81.6 208 29.8
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 1.1e-11 74.7 114 37.7
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 7.8e-10 68.6 86 44.2
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 3.9e-09 66.2 55 67.3
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 3.3e-08 63.2 46 63.0
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 3.6e-07 59.7 82 45.1


User provided reference genes

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