Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 5.4e-45 184.5 135 100.0
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 5.6e-26 121.3 134 72.4
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 1.1e-24 117.1 137 73.7
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 2.6e-23 112.5 137 59.1
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 4.5e-23 111.7 130 62.3
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 5.8e-23 111.3 127 69.3
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 2.9e-22 109.0 140 62.9
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 1.1e-21 107.1 139 65.5
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 1.1e-21 107.1 127 58.3
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 1.9e-21 106.3 128 72.7
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 1.9e-21 106.3 126 58.7
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 3.2e-21 105.5 137 64.2
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 3.2e-21 105.5 140 60.0
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 4.2e-21 105.1 126 57.1
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 4.2e-21 105.1 133 54.1
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 5.4e-21 104.8 136 65.4
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 5.4e-21 104.8 127 70.1
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 2.1e-20 102.8 130 59.2
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 2.1e-20 102.8 137 69.3
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 2.7e-20 102.4 140 64.3
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 2.7e-20 102.4 140 64.3
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 4.6e-20 101.7 132 59.8
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 6.0e-20 101.3 126 68.3
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 6.0e-20 101.3 135 62.2
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 6.0e-20 101.3 135 62.2
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 7.9e-20 100.9 126 62.7
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 7.9e-20 100.9 134 61.2
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 7.9e-20 100.9 128 60.9
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 1.0e-19 100.5 130 61.5
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 1.3e-19 100.1 127 70.9
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 1.8e-19 99.8 134 65.7
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 1.8e-19 99.8 127 59.1
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.8e-19 99.8 126 64.3
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 3.0e-19 99.0 127 70.9
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 3.0e-19 99.0 138 65.2
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 3.9e-19 98.6 128 64.8
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 3.9e-19 98.6 128 64.8
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 5.1e-19 98.2 127 68.5
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 6.7e-19 97.8 129 67.4
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 8.7e-19 97.4 127 65.4
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 8.7e-19 97.4 134 60.4
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 1.1e-18 97.1 132 57.6
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 1.9e-18 96.3 126 57.1
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 1.9e-18 96.3 127 60.6
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 2.5e-18 95.9 132 68.9
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 7.4e-18 94.4 125 66.4
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 2.1e-17 92.8 127 64.6
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 2.8e-17 92.4 127 60.6
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 2.8e-17 92.4 127 62.2
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 4.8e-17 91.7 127 61.4
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 4.8e-17 91.7 127 63.8
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 6.2e-17 91.3 134 61.2
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 6.2e-17 91.3 130 53.8
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 1.1e-16 90.5 137 56.9
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 1.8e-16 89.7 127 60.6
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 2.4e-16 89.4 132 57.6
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 3.1e-16 89.0 130 65.4
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 5.3e-16 88.2 131 56.5
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 6.9e-16 87.8 134 63.4
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 6.9e-16 87.8 127 55.9
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 9.0e-16 87.4 126 54.8
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 1.5e-15 86.7 126 60.3
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 1.5e-15 86.7 134 62.7
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 2.6e-15 85.9 127 64.6
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 2.6e-15 85.9 127 64.6
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 2.6e-15 85.9 127 64.6
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 2.6e-15 85.9 127 64.6
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 3.4e-15 85.5 127 61.4
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 4.5e-15 85.1 126 60.3
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 4.5e-15 85.1 127 61.4
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 9.9e-15 84.0 129 58.9
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 1.3e-14 83.6 126 63.5
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 3.8e-14 82.0 127 65.4
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 3.8e-14 82.0 133 63.9
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 4.9e-14 81.6 127 54.3
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 4.9e-14 81.6 126 63.5
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 6.4e-14 81.3 134 63.4
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 8.4e-14 80.9 127 58.3
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 1.1e-13 80.5 126 59.5
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 1.9e-13 79.7 136 52.2
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 4.6e-12 75.1 97 72.2
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 6.0e-12 74.7 169 53.3
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 6.0e-12 74.7 162 46.3
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 3.0e-11 72.4 135 59.3
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 1.5e-10 70.1 116 56.9
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 4.3e-10 68.6 110 63.6
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 5.6e-10 68.2 97 73.2
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 9.6e-10 67.4 56 53.6
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 4.0e-08 62.0 92 58.7
PGR102G1605 Punica granatum HOM05D007581 ORTHO05D009250 2.6e-07 59.3 103 69.9
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 3.4e-07 58.9 98 72.4
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 4.5e-07 58.5 90 64.4
CDE02G2090 Ceratophyllum demersum HOM05D002859 ORTHO05D003120 7.6e-07 57.8 104 69.2
Mapoly0034s0024 Marchantia polymorpha HOM05D020710 ORTHO05D009250 2.9e-06 55.8 130 55.4
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 4.9e-06 55.1 85 71.8


User provided reference genes

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