Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008928 Vanilla planifolia HOM05D004749 ORTHO05D005995 3.1e-137 491.9 264 100.0
MELO3C008635.2 Cucumis melo HOM05D004749 ORTHO05D005995 9.5e-78 294.3 227 72.7
ClCG11G010380 Citrullus lanatus HOM05D004749 ORTHO05D005995 8.0e-77 291.2 227 71.8
CsaV3_2G009980 Cucumis sativus L. HOM05D004749 ORTHO05D005995 8.9e-76 287.7 228 71.5
TAR362G1144 Trochodendron aralioides HOM05D004749 ORTHO05D005995 1.3e-74 283.9 187 79.1
CiPaw.02G073100 Carya illinoinensis HOM05D004749 ORTHO05D005995 2.9e-74 282.7 183 80.3
Actinidia13350 Actinidia chinensis HOM05D004749 ORTHO05D005995 6.4e-74 281.6 229 69.9
Duzib151G0494 Durio zibethinus HOM05D004749 ORTHO05D005995 4.1e-73 278.9 227 68.7
Cc02_g31810 Coffea canephora HOM05D004749 ORTHO05D005995 5.4e-73 278.5 227 68.7
Hma1.2p1_1168F.1_g263150 Hydrangea macrophylla HOM05D004749 ORTHO05D005995 5.4e-73 278.5 187 78.1
Hma1.2p1_4126F.1_g338340 Hydrangea macrophylla HOM05D004749 ORTHO05D005995 5.4e-73 278.5 187 78.1
arahy.Tifrunner.gnm1.ann1.CI16ME Arachis hypogaea HOM05D004749 ORTHO05D005995 7.0e-73 278.1 182 77.5
Nn3g21759 Nelumbo nucifera HOM05D004749 ORTHO05D005995 7.0e-73 278.1 227 69.6
Sed0018873 Sechium edule HOM05D004749 ORTHO05D005995 9.2e-73 277.7 227 71.8
Gohir.A09G223200 Gossypium hirsutum HOM05D004749 ORTHO05D005995 1.2e-72 277.3 227 69.2
CiPaw.01G136300 Carya illinoinensis HOM05D004749 ORTHO05D005995 1.6e-72 276.9 228 69.3
CANSAT11G0071 Cannabis sativa HOM05D004749 ORTHO05D005995 2.7e-72 276.2 195 76.4
CSS0022958 Camellia sinensis var. sinensis HOM05D004749 ORTHO05D005995 5.9e-72 275.0 187 77.0
Duzib052G0525 Durio zibethinus HOM05D004749 ORTHO05D005995 5.9e-72 275.0 227 68.3
FAN12G1239 Fragaria x ananassa HOM05D004749 ORTHO05D005995 5.9e-72 275.0 195 73.8
QL04p048178 Quercus lobata HOM05D004749 ORTHO05D005995 7.8e-72 274.6 189 76.2
RcHm_v2.0_Chr4g0411531 Rosa chinensis HOM05D004749 ORTHO05D005995 7.8e-72 274.6 195 75.9
CAN.G532.7 Capsicum annuum HOM05D004749 ORTHO05D005995 1.0e-71 274.2 227 68.7
Prupe.1G114400 Prunus persica HOM05D004749 ORTHO05D005995 1.0e-71 274.2 183 77.6
arahy.Tifrunner.gnm1.ann1.YK8CX2 Arachis hypogaea HOM05D004749 ORTHO05D005995 1.3e-71 273.9 231 67.1
Gohir.D09G225200 Gossypium hirsutum HOM05D004749 ORTHO05D005995 2.3e-71 273.1 227 68.3
Gorai.006G246700 Gossypium raimondii HOM05D004749 ORTHO05D005995 2.3e-71 273.1 227 68.3
Sabra08G0077900 Salix brachista HOM05D004749 ORTHO05D005995 2.3e-71 273.1 185 77.8
TAR633G2406 Trochodendron aralioides HOM05D004749 ORTHO05D005995 2.3e-71 273.1 227 69.6
Potri.010G148000 Populus trichocarpa HOM05D004749 ORTHO05D005995 3.0e-71 272.7 227 67.0
Cpa.g.sc106.97 Carica papaya HOM05D004749 ORTHO05D005995 3.9e-71 272.3 184 76.1
PGSC0003DMG400012333 Solanum tuberosum HOM05D004749 ORTHO05D005995 3.9e-71 272.3 187 77.0
FvH4_4g12660 Fragaria vesca HOM05D004749 ORTHO05D005995 5.0e-71 271.9 196 75.0
MD14G1004700 Malus domestica HOM05D004749 ORTHO05D005995 5.0e-71 271.9 228 69.7
Lalb_Chr07g0181981 Lupinus albus HOM05D004749 ORTHO05D005995 6.6e-71 271.6 228 66.2
FAN07G1280 Fragaria x ananassa HOM05D004749 ORTHO05D005995 8.6e-71 271.2 211 69.7
MD16G1150500 Malus domestica HOM05D004749 ORTHO05D005995 8.6e-71 271.2 190 75.8
Solyc08g081330.4 Solanum lycopersicum HOM05D004749 ORTHO05D005995 8.6e-71 271.2 187 77.0
Zm00001eb395880 Zea mays HOM05D004749 ORTHO05D005995 8.6e-71 271.2 227 68.7
QL06p012791 Quercus lobata HOM05D004749 ORTHO05D005995 1.1e-70 270.8 229 67.2
Ca_10737_v3 Cicer arietinum L. HOM05D004749 ORTHO05D005995 1.5e-70 270.4 177 76.8
FAN22G0862 Fragaria x ananassa HOM05D004749 ORTHO05D005995 1.5e-70 270.4 200 71.5
TWI73G0343 Tripterygium wilfordii HOM05D004749 ORTHO05D005995 1.5e-70 270.4 224 68.3
CDE02G1224 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 1.9e-70 270.0 187 75.4
MBI19_g03265_MAGBIO Magnolia biondii HOM05D004749 ORTHO05D005995 1.9e-70 270.0 227 69.2
Sabra10G0114100 Salix brachista HOM05D004749 ORTHO05D005995 1.9e-70 270.0 227 67.0
Aqoxy1G00958 Aquilegia oxysepala HOM05D004749 ORTHO05D005995 3.3e-70 269.2 227 68.3
Ciclev10005025m.g Citrus clementina HOM05D004749 ORTHO05D005995 3.3e-70 269.2 209 70.3
Thecc.04G246100 Theobroma cacao HOM05D004749 ORTHO05D005995 3.3e-70 269.2 227 67.8
PSO210G7457 Papaver somniferum HOM05D004749 ORTHO05D005995 5.6e-70 268.5 224 67.0
Cfa014134 Carpinus fangiana HOM05D004749 ORTHO05D005995 7.3e-70 268.1 228 67.1
FAN17G3131 Fragaria x ananassa HOM05D004749 ORTHO05D005995 7.3e-70 268.1 218 67.9
Nitab4.5_0006920g0020 Nicotiana tabacum HOM05D004749 ORTHO05D005995 9.5e-70 267.7 187 75.9
Nitab4.5_0001220g0090 Nicotiana tabacum HOM05D004749 ORTHO05D005995 1.2e-69 267.3 187 75.9
PSO210G5482 Papaver somniferum HOM05D004749 ORTHO05D005995 1.6e-69 266.9 188 75.5
Nn4g25537 Nelumbo nucifera HOM05D004749 ORTHO05D005995 2.8e-69 266.2 225 67.6
GSVIVG01034965001 Vitis vinifera HOM05D004749 ORTHO05D005995 8.0e-69 264.6 181 76.2
MD12G1007400 Malus domestica HOM05D004749 ORTHO05D005995 1.0e-68 264.2 227 66.1
Sopen08g029650 Solanum pennellii HOM05D004749 ORTHO05D005995 1.4e-68 263.8 218 70.2
Manes.09G084300 Manihot esculenta HOM05D004749 ORTHO05D005995 3.1e-68 262.7 178 76.4
Potri.008G103000 Populus trichocarpa HOM05D004749 ORTHO05D005995 4.0e-68 262.3 227 67.4
Hma1.2p1_1400F.1_g280890 Hydrangea macrophylla HOM05D004749 ORTHO05D005995 5.2e-68 261.9 206 70.9
Oeu061088.1 Olea europaea HOM05D004749 ORTHO05D005995 5.2e-68 261.9 183 74.9
VMungo0720G2504 Vigna mungo HOM05D004749 ORTHO05D005995 6.8e-68 261.5 177 74.0
Carub.0007s1960 Capsella rubella HOM05D004749 ORTHO05D005995 1.2e-67 260.8 189 70.9
Sp7g19970 Schrenkiella parvula HOM05D004749 ORTHO05D005995 2.0e-67 260.0 196 69.9
THA.LOC104827101 Tarenaya hassleriana HOM05D004749 ORTHO05D005995 2.6e-67 259.6 228 65.8
Lj4g0011402 Lotus japonicus HOM05D004749 ORTHO05D005995 4.4e-67 258.8 176 74.4
Medtr1g100240 Medicago truncatula HOM05D004749 ORTHO05D005995 9.8e-67 257.7 177 73.4
Migut.A01124 Erythranthe guttata HOM05D004749 ORTHO05D005995 1.7e-66 256.9 227 66.1
MSTRG.12116 Avicennia marina HOM05D004749 ORTHO05D005995 2.9e-66 256.1 227 64.8
COL.COLO4_15791 Corchorus olitorius HOM05D004749 ORTHO05D005995 2.9e-66 256.1 171 76.6
Hund18596 Selenicereus undatus HOM05D004749 ORTHO05D005995 2.9e-66 256.1 201 70.6
Hma1.2p1_0078F.1_g039880 Hydrangea macrophylla HOM05D004749 ORTHO05D005995 3.7e-66 255.8 207 70.0
Atru.chr4.3050 Acer truncatum HOM05D004749 ORTHO05D005995 5.4e-65 251.9 229 63.3
Glyma.17G035700 Glycine max HOM05D004749 ORTHO05D005995 5.4e-65 251.9 207 66.7
Cfa015286 Carpinus fangiana HOM05D003564 ORTHO05D005332 9.2e-65 251.1 191 71.7
Glyma.07G237800 Glycine max HOM05D004749 ORTHO05D005995 2.7e-64 249.6 228 63.2
TPR.G27004 Trifolium pratense HOM05D004749 ORTHO05D005995 3.5e-64 249.2 175 72.0
HanXRQChr17g0569351 Helianthus annuus HOM05D004749 ORTHO05D005995 4.6e-64 248.8 185 71.4
Eucgr.K01628 Eucalyptus grandis HOM05D004749 ORTHO05D005995 6.0e-64 248.4 228 64.9
SalBow1G5780 Salvia bowleyana HOM05D004749 ORTHO05D005995 7.8e-64 248.1 175 74.9
ECA246G2874 Erigeron canadensis HOM05D004749 ORTHO05D005995 1.0e-63 247.7 185 71.4
Peaxi162Scf00074g02033 Petunia axillaris HOM05D004749 ORTHO05D005995 1.0e-63 247.7 227 64.8
Dinv44265 Davidia involucrata HOM05D003564 ORTHO05D005332 1.3e-63 247.3 187 70.6
Psat6g193640 Pisum sativum HOM05D004749 ORTHO05D005995 2.3e-63 246.5 231 61.9
SEGI_28650 Sequoiadendron giganteum HOM05D004749 ORTHO05D005995 3.0e-63 246.1 205 62.9
SGA_v2.0_scaffold28G11759 Striga asiatica HOM05D004749 ORTHO05D005995 3.0e-63 246.1 207 67.1
EL10Ac7g16373 Beta vulgaris HOM05D004749 ORTHO05D005995 3.9e-63 245.7 195 67.7
Haze_01330 Corylus avellana HOM05D004749 ORTHO05D005995 6.6e-63 245.0 229 64.6
Haze_22859 Corylus avellana HOM05D004749 ORTHO05D005995 8.6e-63 244.6 227 63.0
Lsat_1_v5_gn_9_58140 Lactuca sativa HOM05D004749 ORTHO05D005995 1.1e-62 244.2 178 71.3
AT4G21800 Arabidopsis thaliana HOM05D004749 ORTHO05D005995 2.5e-62 243.0 196 66.8
Phvul.003G116600 Phaseolus vulgaris HOM05D004749 ORTHO05D005995 3.3e-62 242.7 188 67.0
PGR031G3778 Punica granatum HOM05D004749 ORTHO05D005995 3.3e-62 242.7 227 64.8
AL7G32130 Arabidopsis lyrata HOM05D004749 ORTHO05D005995 5.6e-62 241.9 196 66.3
CARHR228550 Cardamine hirsuta HOM05D004749 ORTHO05D005995 1.2e-61 240.7 187 67.4
Sc17g0002650 Simmondsia chinensis HOM05D004749 ORTHO05D005995 1.2e-61 240.7 186 71.0
Actinidia14251 Actinidia chinensis HOM05D004749 ORTHO05D005995 2.1e-61 240.0 152 80.3
AUR62005917 Chenopodium quinoa HOM05D004749 ORTHO05D005995 6.2e-61 238.4 177 70.1
DCAR_026992 Daucus carota HOM05D004749 ORTHO05D005995 8.1e-61 238.0 182 69.2
Rhsim10G0104300 Rhododendron simsii HOM05D004749 ORTHO05D005995 8.1e-61 238.0 175 70.9
AUR62028146 Chenopodium quinoa HOM05D004749 ORTHO05D005995 2.3e-60 236.5 171 71.3
AUR62041770 Chenopodium quinoa HOM05D004749 ORTHO05D005995 2.3e-60 236.5 171 71.3
Pp3c8_16870 Physcomitrium patens HOM05D004749 ORTHO05D005995 4.0e-60 235.7 177 66.7
Thhalv10025484m.g Eutrema salsugineum HOM05D004749 ORTHO05D005995 1.5e-59 233.8 196 65.8
BolC1t01536H Brassica oleracea HOM05D004749 ORTHO05D005995 5.8e-59 231.9 202 63.4
AagrBONN_evm.TU.Sc2ySwM_368.1659 Anthoceros agrestis HOM05D004749 ORTHO05D005995 9.8e-59 231.1 193 65.3
A01p13130 Brassica napus HOM05D004749 ORTHO05D005995 2.2e-58 229.9 202 62.9
BraA01t01257Z Brassica rapa HOM05D004749 ORTHO05D005995 2.2e-58 229.9 202 62.9
BcaC09g51199 Brassica carinata HOM05D004749 ORTHO05D005995 3.7e-58 229.2 202 62.9
C01p15820 Brassica napus HOM05D004749 ORTHO05D005995 3.7e-58 229.2 202 62.9
Manes.08G074300 Manihot esculenta HOM05D004749 ORTHO05D005995 6.4e-58 228.4 228 61.0
BcaNung02248 Brassica carinata HOM05D004749 ORTHO05D005995 3.2e-57 226.1 183 64.5
Psat1g194120 Pisum sativum HOM05D002906 ORTHO05D003211 5.4e-57 225.3 164 68.9
Lju912A2T64 Lonicera japonica HOM05D004749 ORTHO05D005995 1.2e-56 224.2 192 64.1
vmacro12071 Vaccinium macrocarpon HOM05D004749 ORTHO05D005995 2.1e-56 223.4 216 58.3
Mapoly0080s0030 Marchantia polymorpha HOM05D004749 ORTHO05D005995 4.6e-56 222.2 231 52.8
BraA08t33522Z Brassica rapa HOM05D004749 ORTHO05D005995 1.0e-55 221.1 183 65.0
ATR0693G032 Amborella trichopoda HOM05D004749 ORTHO05D005995 1.5e-54 217.2 227 58.1
Dinv15143 Davidia involucrata HOM05D004749 ORTHO05D005995 1.9e-54 216.9 130 81.5
HanXRQChr10g0314441 Helianthus annuus HOM05D004749 ORTHO05D005995 6.2e-53 211.8 185 65.4
vmacro15173 Vaccinium macrocarpon HOM05D004749 ORTHO05D005995 1.8e-52 210.3 233 53.2
SalBow7G1269 Salvia bowleyana HOM05D004749 ORTHO05D005995 5.2e-52 208.8 130 80.0
SMO271G0158 Selaginella moellendorffii HOM05D004749 ORTHO05D005995 3.4e-51 206.1 160 65.6
CBR_g44475 Chara braunii HOM05D004749 ORTHO05D005995 4.4e-51 205.7 130 75.4
Aa31LG6G3810 Aethionema arabicum HOM05D004749 ORTHO05D005995 5.8e-51 205.3 130 75.4
CSS0044945 Camellia sinensis var. sinensis HOM05D004749 ORTHO05D005995 2.3e-47 193.4 203 58.6
HPP92_008940 Vanilla planifolia HOM05D004749 ORTHO05D005995 7.3e-46 188.3 96 97.9
unitig_578.g15957 Utricularia gibba HOM05D004749 ORTHO05D005995 1.6e-45 187.2 146 67.8
DCAR_030456 Daucus carota HOM05D004749 ORTHO05D005995 6.2e-45 185.3 226 52.7
Cre06.g267150 Chlamydomonas reinhardtii HOM05D004749 ORTHO05D005995 5.2e-44 182.2 163 56.4
PRCOL_00000431 Prasinoderma coloniale HOM05D004749 ORTHO05D005995 2.0e-43 180.3 168 56.0
MCO13G184 Micromonas commoda HOM05D004749 ORTHO05D005995 1.4e-41 174.1 186 54.8
C03p83720 Brassica napus HOM05D004749 ORTHO05D005995 4.3e-38 162.5 188 53.2
Cfa026321 Carpinus fangiana HOM05D004749 ORTHO05D005995 2.4e-36 156.8 270 39.3
Haze_27364 Corylus avellana HOM05D004749 ORTHO05D005995 1.7e-34 150.6 158 49.4
HanXRQChr08g0212681 Helianthus annuus HOM05D004749 ORTHO05D005995 2.9e-34 149.8 130 62.3
BcaC01g00741 Brassica carinata HOM05D004749 ORTHO05D005995 4.2e-33 146.0 228 47.8
Lj6C561G5 Lonicera japonica HOM05D004749 ORTHO05D005995 1.7e-31 140.6 152 54.6
MD13G1150100 Malus domestica HOM05D004749 ORTHO05D005995 3.6e-29 132.9 172 49.4
BolC3t20652H Brassica oleracea HOM05D004749 ORTHO05D005995 4.0e-28 129.4 188 46.3
CSS0038246 Camellia sinensis var. sinensis HOM05D004749 ORTHO05D005995 9.0e-28 128.3 160 52.5
A08p15460 Brassica napus HOM05D004749 ORTHO05D005995 1.5e-27 127.5 121 62.0
Lj6A693T62 Lonicera japonica HOM05D004749 ORTHO05D005995 1.1e-25 121.3 125 56.0
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 6.0e-24 115.5 61 88.5
arahy.Tifrunner.gnm1.ann1.08UNPH Arachis hypogaea HOM05D004749 ORTHO05D005995 1.8e-23 114.0 61 85.2
arahy.Tifrunner.gnm1.ann1.3R6CDR Arachis hypogaea HOM05D004749 ORTHO05D005995 1.8e-23 114.0 61 85.2
Psat7g201920 Pisum sativum HOM05D000835 ORTHO05D004825 1.3e-18 97.8 116 52.6
PSO063G4024 Papaver somniferum HOM05D004749 ORTHO05D005995 2.9e-18 96.7 166 40.4
CARHR228600 Cardamine hirsuta HOM05D004749 ORTHO05D043482 6.3e-13 79.0 55 69.1
CDE08G0804 Ceratophyllum demersum HOM05D004749 ORTHO05D034260 3.4e-11 73.2 117 47.9
TAR374G0424 Trochodendron aralioides HOM05D000090 ORTHO05D001322 5.9e-11 72.4 54 64.8
MELO3C012760.2 Cucumis melo HOM05D004749 ORTHO05D034260 1.3e-10 71.2 102 52.0
Hma1.2p1_0013F.1_g008320 Hydrangea macrophylla HOM05D004749 ORTHO05D043482 3.6e-08 63.2 71 53.5


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