Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 2.9e-202 708.4 370 100.0
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 9.8e-105 384.4 369 58.5
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 1.7e-104 383.6 333 60.1
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 4.8e-104 382.1 311 61.7
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 6.3e-104 381.7 347 57.9
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 5.4e-103 378.6 375 56.8
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 7.0e-103 378.3 355 57.2
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 7.0e-103 378.3 327 61.2
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 1.2e-102 377.5 370 56.5
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.6e-102 377.1 298 64.8
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 2.0e-102 376.7 313 61.7
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 2.7e-102 376.3 333 61.3
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 2.7e-102 376.3 351 57.3
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 3.5e-102 375.9 361 58.2
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 5.9e-102 375.2 378 54.8
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 5.9e-102 375.2 352 58.5
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 1.7e-101 373.6 360 56.7
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 2.2e-101 373.2 374 56.1
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 2.2e-101 373.2 293 64.8
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 2.9e-101 372.9 319 60.2
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 2.9e-101 372.9 334 58.4
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 2.9e-101 372.9 295 64.4
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 5.0e-101 372.1 360 56.9
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 6.5e-101 371.7 302 61.3
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 8.5e-101 371.3 345 58.6
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 1.1e-100 370.9 360 56.9
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 1.9e-100 370.2 294 62.9
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.9e-100 370.2 292 64.4
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 3.2e-100 369.4 333 60.7
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 3.2e-100 369.4 372 55.1
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 3.2e-100 369.4 338 58.9
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 4.2e-100 369.0 364 56.9
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 4.2e-100 369.0 307 59.9
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 5.5e-100 368.6 333 59.8
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 7.2e-100 368.2 316 62.3
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 7.2e-100 368.2 331 58.3
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 7.2e-100 368.2 321 58.6
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 1.6e-99 367.1 317 61.5
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.6e-99 367.1 359 56.8
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 1.6e-99 367.1 321 58.9
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 1.6e-99 367.1 323 61.9
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 1.6e-99 367.1 368 55.7
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 1.6e-99 367.1 349 57.0
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.1e-99 366.7 376 55.3
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 2.7e-99 366.3 354 56.2
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 4.7e-99 365.5 362 54.7
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 6.1e-99 365.2 336 58.9
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 1.0e-98 364.4 332 58.7
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 1.0e-98 364.4 294 63.6
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 1.0e-98 364.4 351 56.1
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 1.8e-98 363.6 344 58.1
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 2.3e-98 363.2 354 55.9
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 2.3e-98 363.2 357 56.3
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 3.0e-98 362.8 357 56.6
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 3.0e-98 362.8 273 66.7
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 3.0e-98 362.8 357 54.9
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 3.0e-98 362.8 357 56.3
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 4.0e-98 362.5 351 56.4
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 4.0e-98 362.5 351 56.4
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 4.0e-98 362.5 351 56.4
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 8.8e-98 361.3 324 60.8
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 8.8e-98 361.3 337 58.5
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 1.2e-97 360.9 327 57.8
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 1.5e-97 360.5 360 56.1
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 1.5e-97 360.5 289 63.7
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 2.6e-97 359.8 369 54.5
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 7.5e-97 358.2 323 59.8
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 7.5e-97 358.2 377 54.6
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 7.5e-97 358.2 347 55.3
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 9.8e-97 357.8 371 53.9
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 1.3e-96 357.5 302 59.9
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 2.8e-96 356.3 368 54.3
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 3.7e-96 355.9 373 54.7
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 7.0e-95 351.7 319 56.4
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 2.0e-94 350.1 274 63.9
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 2.7e-94 349.7 378 51.9
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 8.6e-93 344.7 316 57.6
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 2.1e-91 340.1 337 55.8
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 6.8e-90 335.1 298 60.1
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 6.4e-88 328.6 266 62.0
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 7.0e-87 325.1 275 58.2
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 1.6e-86 323.9 264 58.0
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 5.9e-86 322.0 273 56.0
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 1.3e-85 320.9 355 50.7
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 8.6e-85 318.2 284 59.9
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 4.7e-83 312.4 276 56.9
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 6.2e-83 312.0 257 60.7
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.6e-81 306.6 256 60.9
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 2.2e-80 303.5 276 55.8
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 4.9e-80 302.4 273 55.3
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 7.0e-79 298.5 276 53.6
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 7.0e-79 298.5 254 59.4
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 2.0e-78 297.0 284 52.5
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.0e-78 297.0 276 52.5
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 2.7e-78 296.6 379 50.1
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 4.6e-78 295.8 260 58.5
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 4.6e-78 295.8 276 53.6
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 6.0e-78 295.4 275 53.1
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 2.5e-76 290.0 256 57.0
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 1.6e-75 287.3 307 49.8
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 4.7e-75 285.8 299 48.8
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 1.2e-73 281.2 295 47.5
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 3.4e-73 279.6 295 47.1
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 7.5e-73 278.5 286 49.7
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 4.9e-72 275.8 266 53.0
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 4.9e-72 275.8 295 47.1
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 9.2e-71 271.6 271 49.1
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 9.2e-71 271.6 271 49.1
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 9.2e-71 271.6 261 52.1
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 1.2e-70 271.2 260 52.3
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 2.1e-70 270.4 265 51.3
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 6.0e-70 268.9 315 47.6
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 7.8e-70 268.5 246 56.1
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 3.9e-69 266.2 261 51.3
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 5.1e-69 265.8 261 51.3
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 1.9e-68 263.8 284 48.2
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 1.9e-68 263.8 260 51.2
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 2.5e-68 263.5 287 48.1
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 2.5e-68 263.5 261 56.7
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 3.3e-68 263.1 297 47.8
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 7.3e-68 261.9 263 50.2
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 9.5e-68 261.5 271 49.8
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 9.5e-68 261.5 271 49.8
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 1.8e-66 257.3 312 48.1
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 9.9e-65 251.5 242 48.8
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 6.4e-64 248.8 295 44.7
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 6.4e-64 248.8 244 48.8
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.3e-61 240.4 267 47.2
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 1.1e-60 238.0 177 67.2
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 4.3e-60 236.1 262 48.5
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 2.8e-59 233.4 237 54.0
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 6.8e-58 228.8 241 47.7
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 2.0e-57 227.3 203 57.1
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 1.3e-56 224.6 202 56.4
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 8.4e-56 221.9 168 63.1
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.2e-55 219.9 271 44.3
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 4.2e-55 219.5 271 44.3
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 9.3e-55 218.4 276 44.6
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 1.3e-53 214.5 292 46.2
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 1.6e-46 191.0 418 34.0
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 3.3e-44 183.3 187 48.1
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 2.1e-43 180.6 191 47.6
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 4.0e-42 176.4 161 53.4
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 5.3e-42 176.0 279 40.9
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 1.9e-39 167.5 137 60.6
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 1.3e-37 161.4 309 40.1
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 8.7e-37 158.7 178 44.9
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.3e-35 154.8 151 55.6
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 1.4e-34 151.4 249 36.1
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 1.6e-27 127.9 224 36.6
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 4.8e-27 126.3 143 51.0
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 4.8e-27 126.3 255 34.5
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.4e-26 124.8 111 54.1
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 2.5e-20 104.0 73 72.6
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 3.7e-19 100.1 195 40.0
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 6.3e-19 99.4 181 35.9
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 4.1e-18 96.7 65 73.8
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 5.3e-18 96.3 116 44.0
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 6.9e-18 95.9 98 51.0
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.4e-15 88.2 121 37.2
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.5e-15 87.4 236 28.4
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 1.4e-13 81.6 68 60.3
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 2.3e-13 80.9 79 53.2
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.3e-11 75.1 50 64.0
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 9.1e-10 68.9 70 51.4
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 1.2e-09 68.6 58 60.3
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 2.6e-09 67.4 57 56.1
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 2.6e-09 67.4 121 40.5
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 9.4e-07 58.9 92 35.9
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 2.7e-06 57.4 46 54.3


User provided reference genes

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