Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008849 Vanilla planifolia HOM05D004238 ORTHO05D004934 5.7e-242 840.5 423 100.0
HPP92_008863 Vanilla planifolia HOM05D004238 ORTHO05D004934 1.2e-167 593.6 356 88.2
Atru.chr9.900 Acer truncatum HOM05D004238 ORTHO05D004934 4.3e-157 558.5 372 73.7
Hma1.2p1_1283F.1_g272760 Hydrangea macrophylla HOM05D004238 ORTHO05D004934 4.0e-155 552.0 381 71.9
Dinv28139 Davidia involucrata HOM05D004238 ORTHO05D004934 5.3e-155 551.6 380 71.8
GSVIVG01008335001 Vitis vinifera HOM05D004238 ORTHO05D004934 9.0e-155 550.8 379 71.2
MELO3C017324.2 Cucumis melo HOM05D004238 ORTHO05D004934 1.2e-154 550.4 384 70.3
Lj4g0001453 Lotus japonicus HOM05D004238 ORTHO05D004934 1.2e-154 550.4 429 65.3
TAR371G0763 Trochodendron aralioides HOM05D004238 ORTHO05D004934 1.2e-154 550.4 383 71.8
Os01g0138900 Oryza sativa ssp. japonica HOM05D004238 ORTHO05D004934 1.5e-154 550.1 372 73.7
MBI09_g25158_MAGBIO Magnolia biondii HOM05D004238 ORTHO05D004934 2.0e-154 549.7 380 72.4
TAR535G0010 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.4e-154 548.9 385 71.2
CSS0035838 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 7.6e-154 547.7 383 71.3
CSS0018341 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 1.3e-153 547.0 383 71.0
Nitab4.5_0001986g0030 Nicotiana tabacum HOM05D004238 ORTHO05D004934 3.8e-153 545.4 383 70.8
ATR0807G117 Amborella trichopoda HOM05D004238 ORTHO05D004934 6.4e-153 544.7 375 72.5
ClCG06G014610 Citrullus lanatus HOM05D004238 ORTHO05D004934 6.4e-153 544.7 372 71.0
TWI15G0256 Tripterygium wilfordii HOM05D004238 ORTHO05D004934 1.1e-152 543.9 369 73.2
CsaV3_1G004010 Cucumis sativus L. HOM05D004238 ORTHO05D004934 1.9e-152 543.1 384 69.5
Migut.I00409 Erythranthe guttata HOM05D004238 ORTHO05D004934 1.9e-152 543.1 421 65.6
Nitab4.5_0004028g0040 Nicotiana tabacum HOM05D004238 ORTHO05D004934 1.9e-152 543.1 383 70.0
Nn4g23948 Nelumbo nucifera HOM05D004238 ORTHO05D004934 2.4e-152 542.7 382 70.9
arahy.Tifrunner.gnm1.ann1.NC6GJT Arachis hypogaea HOM05D004238 ORTHO05D004934 3.2e-152 542.3 384 70.1
Ca_11587_v3 Cicer arietinum L. HOM05D004238 ORTHO05D004934 3.2e-152 542.3 412 66.3
Aqoxy3G00204 Aquilegia oxysepala HOM05D004238 ORTHO05D004934 4.2e-152 542.0 371 71.2
Eucgr.B00825 Eucalyptus grandis HOM05D004238 ORTHO05D004934 4.2e-152 542.0 383 71.0
RcHm_v2.0_Chr7g0179451 Rosa chinensis HOM05D004238 ORTHO05D004934 6.0e-151 538.1 413 66.1
arahy.Tifrunner.gnm1.ann1.KCMD1F Arachis hypogaea HOM05D004238 ORTHO05D004934 1.0e-150 537.3 386 68.9
PSO017G2643 Papaver somniferum HOM05D004238 ORTHO05D004934 1.3e-150 537.0 371 71.2
Psat7g083560 Pisum sativum HOM05D004238 ORTHO05D004934 1.3e-150 537.0 425 64.0
Potri.012G054200 Populus trichocarpa HOM05D004238 ORTHO05D004934 1.3e-150 537.0 373 71.3
CiPaw.16G088800 Carya illinoinensis HOM05D004238 ORTHO05D004934 3.9e-150 535.4 384 69.0
VMungo0251G1679 Vigna mungo HOM05D004238 ORTHO05D004934 5.1e-150 535.0 409 65.8
Prupe.5G224400 Prunus persica HOM05D004238 ORTHO05D004934 8.7e-150 534.3 416 66.1
TPR.G5108 Trifolium pratense HOM05D004238 ORTHO05D004934 8.7e-150 534.3 414 65.0
Solyc03g119200.4 Solanum lycopersicum HOM05D004238 ORTHO05D004934 1.1e-149 533.9 387 68.5
PGSC0003DMG400005732 Solanum tuberosum HOM05D004238 ORTHO05D004934 1.1e-149 533.9 372 70.7
Glyma.05G139300 Glycine max HOM05D004238 ORTHO05D004934 1.5e-149 533.5 384 68.0
PGR083G1292 Punica granatum HOM05D004238 ORTHO05D004934 1.5e-149 533.5 386 69.4
CAN.G1129.11 Capsicum annuum HOM05D004238 ORTHO05D004934 3.3e-149 532.3 372 70.4
FAN13G1096 Fragaria x ananassa HOM05D004238 ORTHO05D004934 3.3e-149 532.3 412 65.0
Phvul.002G182700 Phaseolus vulgaris HOM05D004238 ORTHO05D004934 3.3e-149 532.3 384 68.0
Duzib084G0471 Durio zibethinus HOM05D004238 ORTHO05D004934 5.6e-149 531.6 372 70.4
Glyma.08G094600 Glycine max HOM05D004238 ORTHO05D004934 5.6e-149 531.6 384 68.0
DCAR_015154 Daucus carota HOM05D004238 ORTHO05D004934 9.6e-149 530.8 379 69.4
Sed0011571 Sechium edule HOM05D004238 ORTHO05D004934 1.3e-148 530.4 372 70.2
Haze_18725 Corylus avellana HOM05D004238 ORTHO05D004934 1.6e-148 530.0 424 64.4
Sabra12G0038000 Salix brachista HOM05D004238 ORTHO05D004934 1.6e-148 530.0 386 68.4
Hund02354 Selenicereus undatus HOM05D004238 ORTHO05D004934 2.1e-148 529.6 374 70.9
Lj9C425T3 Lonicera japonica HOM05D004238 ORTHO05D004934 4.8e-148 528.5 380 69.7
FAN18G3483 Fragaria x ananassa HOM05D004238 ORTHO05D004934 6.2e-148 528.1 412 64.8
Oeu000985.1 Olea europaea HOM05D004238 ORTHO05D004934 6.2e-148 528.1 397 67.3
COL.COLO4_20838 Corchorus olitorius HOM05D004238 ORTHO05D004934 8.2e-148 527.7 372 70.4
MD14G1229600 Malus domestica HOM05D004238 ORTHO05D004934 8.2e-148 527.7 372 69.9
Thecc.03G040700 Theobroma cacao HOM05D004238 ORTHO05D004934 1.4e-147 526.9 371 70.4
CANSAT80G2380 Cannabis sativa HOM05D004238 ORTHO05D004934 1.8e-147 526.6 375 67.7
Cpa.g.sc3.467 Carica papaya HOM05D004238 ORTHO05D004934 2.4e-147 526.2 383 68.1
Lalb_Chr13g0293671 Lupinus albus HOM05D004238 ORTHO05D004934 2.4e-147 526.2 428 61.9
BolC5t33477H Brassica oleracea HOM05D004238 ORTHO05D004934 9.0e-147 524.2 408 65.2
Peaxi162Scf00683g00158 Petunia axillaris HOM05D004238 ORTHO05D004934 1.2e-146 523.9 383 68.1
AT3G18270 Arabidopsis thaliana HOM05D004238 ORTHO05D004934 1.5e-146 523.5 416 62.7
C05p47680 Brassica napus HOM05D004238 ORTHO05D004934 2.0e-146 523.1 408 65.0
Carub.0003s1804 Capsella rubella HOM05D004238 ORTHO05D004934 2.6e-146 522.7 415 63.6
FAN08G0774 Fragaria x ananassa HOM05D004238 ORTHO05D004934 5.8e-146 521.5 425 63.1
BraA05t21977Z Brassica rapa HOM05D004238 ORTHO05D004934 1.3e-145 520.4 408 64.5
TAR426G0005 Trochodendron aralioides HOM05D004238 ORTHO05D004934 2.2e-145 519.6 364 72.0
Aa31LG8G5120 Aethionema arabicum HOM05D004238 ORTHO05D004934 8.4e-145 517.7 372 66.9
A05p31380 Brassica napus HOM05D004238 ORTHO05D004934 1.1e-144 517.3 408 63.7
AL3G31500 Arabidopsis lyrata HOM05D004238 ORTHO05D004934 7.1e-144 514.6 375 67.2
Thhalv10020846m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 7.1e-144 514.6 376 67.8
Lsat_1_v5_gn_8_143241 Lactuca sativa HOM05D004238 ORTHO05D004934 3.5e-143 512.3 396 65.2
THA.LOC104820382 Tarenaya hassleriana HOM05D004238 ORTHO05D004934 4.6e-143 511.9 404 65.3
MSTRG.11313 Avicennia marina HOM05D004238 ORTHO05D004934 1.0e-142 510.8 372 68.3
Cc04_g06880 Coffea canephora HOM05D004238 ORTHO05D004934 1.8e-142 510.0 372 68.8
Sc04g0003400 Simmondsia chinensis HOM05D004238 ORTHO05D004934 1.8e-142 510.0 381 67.5
PSO478G0260 Papaver somniferum HOM05D004238 ORTHO05D004934 1.1e-141 507.3 350 71.7
Gohir.D07G071400 Gossypium hirsutum HOM05D004238 ORTHO05D004934 7.4e-141 504.6 364 69.5
FAN04G1535 Fragaria x ananassa HOM05D004238 ORTHO05D004934 1.1e-139 500.7 412 62.6
Dinv34796 Davidia involucrata HOM05D004238 ORTHO05D004934 1.8e-139 500.0 372 66.4
HanXRQChr17g0559411 Helianthus annuus HOM05D004238 ORTHO05D004934 2.4e-139 499.6 369 68.0
FvH4_5g16670 Fragaria vesca HOM05D004238 ORTHO05D004934 3.1e-139 499.2 390 65.4
Thhalv10022164m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 3.8e-137 492.3 382 64.9
Rhsim08G0130500 Rhododendron simsii HOM05D004238 ORTHO05D004934 8.5e-137 491.1 401 63.1
Rhsim08G0130600 Rhododendron simsii HOM05D004238 ORTHO05D004934 8.5e-137 491.1 401 63.1
MD06G1220000 Malus domestica HOM05D004238 ORTHO05D004934 7.2e-136 488.0 378 65.6
DCAR_011373 Daucus carota HOM05D004238 ORTHO05D004934 1.4e-134 483.8 381 61.7
Dinv12220 Davidia involucrata HOM05D004238 ORTHO05D004934 5.7e-133 478.4 385 62.9
Manes.01G014900 Manihot esculenta HOM05D004238 ORTHO05D004934 4.1e-131 472.2 374 64.4
Gorai.001G075300 Gossypium raimondii HOM05D004238 ORTHO05D004934 4.5e-130 468.8 345 68.4
DCAR_011371 Daucus carota HOM05D004238 ORTHO05D004934 5.0e-129 465.3 351 65.0
CDE08G0051 Ceratophyllum demersum HOM05D004238 ORTHO05D004934 3.2e-128 462.6 371 62.0
Ciclev10011789m.g Citrus clementina HOM05D004238 ORTHO05D004934 5.5e-128 461.8 370 62.7
Atru.chr1.1618 Acer truncatum HOM05D004238 ORTHO05D004934 4.7e-127 458.8 370 62.2
Duzib138G0550 Durio zibethinus HOM05D004238 ORTHO05D004934 4.1e-123 445.7 371 60.4
Manes.02G071200 Manihot esculenta HOM05D004238 ORTHO05D004934 5.3e-123 445.3 376 59.0
DCAR_024088 Daucus carota HOM05D004238 ORTHO05D004934 8.5e-121 438.0 337 63.8
CsaV3_2G033830 Cucumis sativus L. HOM05D004238 ORTHO05D004934 2.1e-119 433.3 370 57.6
Thecc.04G129000 Theobroma cacao HOM05D004238 ORTHO05D004934 2.7e-119 433.0 371 58.2
Gohir.D11G171700 Gossypium hirsutum HOM05D004238 ORTHO05D004934 1.8e-118 430.3 373 57.6
COL.COLO4_09370 Corchorus olitorius HOM05D004238 ORTHO05D004934 5.2e-118 428.7 372 57.3
Gohir.A11G165600 Gossypium hirsutum HOM05D004238 ORTHO05D004934 2.6e-117 426.4 373 57.4
CiPaw.15G135000 Carya illinoinensis HOM05D004238 ORTHO05D004934 4.8e-116 422.2 301 68.1
Pp3c2_34370 Physcomitrium patens HOM05D004238 ORTHO05D004934 4.8e-116 422.2 367 56.1
Sp3g16390 Schrenkiella parvula HOM05D004238 ORTHO05D004934 1.1e-115 421.0 393 58.5
ClCG11G007750 Citrullus lanatus HOM05D004238 ORTHO05D004934 4.5e-114 415.6 420 51.7
Mapoly0058s0107 Marchantia polymorpha HOM05D004238 ORTHO05D004934 2.9e-113 412.9 363 57.0
Cpa.g.sc170.33 Carica papaya HOM05D004238 ORTHO05D004934 7.2e-112 408.3 371 56.1
CANSAT78G0772 Cannabis sativa HOM05D004238 ORTHO05D004934 2.7e-111 406.4 373 54.4
SMO146G0383 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 4.7e-111 405.6 340 61.8
DCAR_011370 Daucus carota HOM05D004238 ORTHO05D004934 2.2e-108 396.7 424 51.7
Zm00001eb335570 Zea mays HOM05D004238 ORTHO05D004934 2.8e-108 396.4 267 73.4
Zm00001eb124820 Zea mays HOM05D004238 ORTHO05D004934 4.2e-104 382.5 257 73.5
DCAR_011367 Daucus carota HOM05D004238 ORTHO05D004934 3.6e-103 379.4 340 55.9
DCAR_011366 Daucus carota HOM05D004238 ORTHO05D004934 8.0e-103 378.3 357 56.3
Gohir.A07G066800 Gossypium hirsutum HOM05D004238 ORTHO05D004934 1.2e-101 374.4 282 67.7
ECA233G1745 Erigeron canadensis HOM05D004238 ORTHO05D004934 1.0e-97 361.3 378 51.1
SMO146G0146 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 1.8e-94 350.5 354 55.1
Eucgr.B00826 Eucalyptus grandis HOM05D004238 ORTHO05D004934 2.0e-93 347.1 368 52.2
CARHR093620 Cardamine hirsuta HOM05D004238 ORTHO05D004934 4.1e-91 339.3 226 71.2
DCAR_000177 Daucus carota HOM05D004238 ORTHO05D004934 3.2e-83 313.2 224 67.4
Potri.015G044400 Populus trichocarpa HOM05D004238 ORTHO05D004934 9.8e-77 291.6 316 53.5
Nn2g15201 Nelumbo nucifera HOM05D004238 ORTHO05D004934 3.0e-73 280.0 202 70.3
PRCOL_00000826 Prasinoderma coloniale HOM05D004238 ORTHO05D004934 3.8e-60 236.5 330 42.4
DCAR_011376 Daucus carota HOM05D004238 ORTHO05D004934 6.9e-54 215.7 187 56.7
TAR371G0419 Trochodendron aralioides HOM05D004238 ORTHO05D004934 5.1e-49 199.5 162 63.0
Sabra15G0040700 Salix brachista HOM05D004238 ORTHO05D004934 2.7e-42 177.2 173 50.9
Duzib205G0622 Durio zibethinus HOM05D004238 ORTHO05D004934 1.2e-37 161.8 197 46.7
MELO3C008155.2 Cucumis melo HOM05D004238 ORTHO05D004934 1.5e-37 161.4 174 49.4
TPR.G26740 Trifolium pratense HOM05D004238 ORTHO05D004934 2.6e-37 160.6 105 71.4
DCAR_000092 Daucus carota HOM05D004238 ORTHO05D004934 7.6e-37 159.1 111 69.4
Sed0014968 Sechium edule HOM05D004238 ORTHO05D004934 7.6e-37 159.1 117 65.0
AagrBONN_evm.TU.Sc2ySwM_117.3507 Anthoceros agrestis HOM05D004238 ORTHO05D004934 4.9e-36 156.4 168 51.2
Psat5g132800 Pisum sativum HOM05D004238 ORTHO05D004934 1.4e-35 154.8 118 64.4
Atru.chr12.656 Acer truncatum HOM05D004238 ORTHO05D004934 1.2e-34 151.8 116 62.9
Atru.chr12.683 Acer truncatum HOM05D004238 ORTHO05D004934 1.0e-33 148.7 112 62.5
arahy.Tifrunner.gnm1.ann1.78LW43 Arachis hypogaea HOM05D004238 ORTHO05D004934 1.1e-32 145.2 110 64.5
arahy.Tifrunner.gnm1.ann1.8NU3PL Arachis hypogaea HOM05D004238 ORTHO05D004934 1.1e-32 145.2 110 64.5
Lalb_Chr00c06g0404671 Lupinus albus HOM05D004238 ORTHO05D004934 1.1e-32 145.2 122 60.7
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 7.4e-32 142.5 159 50.3
arahy.Tifrunner.gnm1.ann1.K93WBA Arachis hypogaea HOM05D004238 ORTHO05D004934 1.3e-28 131.7 100 65.0
C05p38610 Brassica napus HOM05D004238 ORTHO05D004934 4.1e-22 110.2 104 55.8
Pp3s30_460 Physcomitrium patens HOM05D019034 ORTHO05D004934 5.3e-22 109.8 364 26.4
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 3.4e-21 107.1 91 58.2
SEGI_36538 Sequoiadendron giganteum HOM05D004238 ORTHO05D004934 1.4e-19 101.7 123 45.5
Zm00001eb084840 Zea mays HOM05D004238 ORTHO05D004934 3.2e-19 100.5 74 66.2
Nn4g22334 Nelumbo nucifera HOM05D004238 ORTHO05D004934 7.2e-19 99.4 73 67.1
BolC5t32601H Brassica oleracea HOM05D004238 ORTHO05D004934 2.1e-18 97.8 91 56.0
Psat0s1333g0160 Pisum sativum HOM05D004238 ORTHO05D004934 1.8e-17 94.7 79 57.0
Nn4g22335 Nelumbo nucifera HOM05D004238 ORTHO05D004934 5.1e-17 93.2 63 71.4
arahy.Tifrunner.gnm1.ann1.QA2PAR Arachis hypogaea HOM05D004238 ORTHO05D004934 1.3e-15 88.6 71 62.0
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 6.3e-15 86.3 111 45.9
Dinv00811 Davidia involucrata HOM05D004238 ORTHO05D004934 6.3e-15 86.3 141 38.3
BcaC08g44328 Brassica carinata HOM05D004238 ORTHO05D004934 1.4e-14 85.1 68 55.9
C06p17530 Brassica napus HOM05D004238 ORTHO05D004934 1.4e-14 85.1 68 55.9
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 2.0e-13 81.3 72 59.7
Zm00001eb312660 Zea mays HOM05D004238 ORTHO05D004934 7.7e-13 79.3 76 59.2
Solyc08g045760.1 Solanum lycopersicum HOM05D004238 ORTHO05D004934 1.4e-11 75.1 62 59.7
Atru.chr12.682 Acer truncatum HOM05D004238 ORTHO05D004934 1.9e-11 74.7 64 60.9
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 1.9e-11 74.7 59 61.0
BcaC04g23227 Brassica carinata HOM05D004238 ORTHO05D004934 1.2e-10 72.0 62 53.2
BcaC08g45100 Brassica carinata HOM05D004238 ORTHO05D004934 1.2e-10 72.0 62 53.2
BolC6t37880H Brassica oleracea HOM05D004238 ORTHO05D004934 1.2e-10 72.0 62 53.2
BolC9t53984H Brassica oleracea HOM05D004238 ORTHO05D004934 1.2e-10 72.0 62 53.2
TAR374G1013 Trochodendron aralioides HOM05D001418 ORTHO05D002038 2.1e-10 71.2 99 41.4
VMungo1127G1492 Vigna mungo HOM05D000769 ORTHO05D000598 3.6e-10 70.5 69 50.7
BcaC06g36376 Brassica carinata HOM05D004238 ORTHO05D004934 7.9e-10 69.3 62 53.2
Pp3c9_10620 Physcomitrium patens HOM05D003438 ORTHO05D004235 3.0e-09 67.4 390 26.7
CiPaw.05G119100 Carya illinoinensis HOM05D003438 ORTHO05D004235 8.8e-09 65.9 378 24.9
BolC6t36947H Brassica oleracea HOM05D004238 ORTHO05D004934 1.7e-07 61.6 51 52.9
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 6.3e-07 59.7 53 56.6


User provided reference genes

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