Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 0.0e+00 1297.7 675 100.0
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 4.4e-196 688.7 673 56.2
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 6.8e-189 664.8 663 56.6
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 4.4e-188 662.1 674 54.9
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 3.5e-185 652.5 672 53.3
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 6.0e-185 651.7 684 53.8
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 1.0e-184 651.0 687 52.3
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 3.0e-184 649.4 679 53.8
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 6.6e-184 648.3 673 53.6
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 7.3e-183 644.8 670 53.0
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 7.3e-183 644.8 678 53.8
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 1.1e-181 641.0 679 52.6
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.8e-181 640.2 671 53.2
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 6.8e-181 638.3 675 53.0
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 5.8e-180 635.2 676 53.0
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 7.6e-180 634.8 695 51.9
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.7e-179 633.6 676 52.2
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 2.2e-179 633.3 669 53.5
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 2.2e-179 633.3 672 51.9
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 6.4e-179 631.7 679 53.6
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 8.4e-179 631.3 681 52.7
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.1e-178 630.9 679 53.3
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.9e-178 630.2 685 52.7
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 1.9e-178 630.2 672 52.1
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 3.2e-178 629.4 685 52.7
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 4.1e-178 629.0 673 52.3
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 7.1e-178 628.2 678 52.5
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 1.2e-177 627.5 679 53.2
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 2.7e-177 626.3 676 52.7
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 4.6e-177 625.5 673 52.0
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 4.6e-177 625.5 679 53.8
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 4.6e-177 625.5 683 53.0
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 7.8e-177 624.8 692 51.7
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.7e-176 623.6 681 53.2
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.7e-176 623.6 675 52.6
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.3e-176 623.2 678 51.0
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 3.0e-176 622.9 683 51.7
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.1e-175 620.9 674 53.4
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.9e-175 620.2 665 52.6
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 2.5e-175 619.8 678 51.2
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 3.3e-175 619.4 671 50.5
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 5.6e-175 618.6 676 50.9
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 9.6e-175 617.8 677 52.0
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 9.6e-175 617.8 675 51.3
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 2.8e-174 616.3 684 50.9
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.6e-174 615.9 678 51.3
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 3.6e-174 615.9 673 52.6
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 8.1e-174 614.8 686 51.9
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 1.4e-173 614.0 679 51.7
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.4e-173 614.0 674 53.3
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 6.9e-173 611.7 673 51.6
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 8.9e-173 611.3 681 50.5
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.6e-172 609.8 718 51.1
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.6e-172 609.8 677 51.6
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 3.4e-172 609.4 682 49.6
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 5.8e-172 608.6 672 50.1
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 7.6e-172 608.2 671 51.7
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.7e-171 607.1 699 50.5
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 2.9e-171 606.3 683 52.6
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 4.9e-171 605.5 691 50.1
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 8.4e-171 604.7 675 50.5
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.4e-170 604.0 682 49.6
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.4e-170 604.0 682 49.6
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 4.2e-170 602.4 674 51.3
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 7.1e-170 601.7 675 51.1
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 4.6e-169 599.0 679 51.3
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 8.7e-168 594.7 671 50.4
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.6e-166 590.5 676 50.7
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 4.8e-166 589.0 703 50.1
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 6.2e-166 588.6 708 50.0
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.4e-165 587.4 686 50.0
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 6.0e-161 572.0 669 48.9
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.0e-160 571.2 662 49.4
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.9e-159 567.0 612 52.9
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 4.0e-157 559.3 677 49.2
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 2.0e-156 557.0 637 50.9
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 4.5e-156 555.8 688 48.5
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.7e-155 553.9 675 48.3
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 1.7e-155 553.9 679 48.7
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 2.9e-155 553.1 686 46.8
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 3.8e-155 552.7 681 47.0
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 8.4e-155 551.6 671 48.4
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 8.4e-155 551.6 670 48.8
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 5.5e-154 548.9 676 47.3
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.2e-153 547.7 665 48.4
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 1.6e-153 547.4 681 47.0
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 8.7e-152 541.6 679 48.2
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 1.9e-151 540.4 656 46.2
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 4.3e-151 539.3 681 49.2
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 9.6e-151 538.1 670 46.6
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.6e-150 537.3 676 46.9
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 1.6e-150 537.3 676 47.2
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 2.8e-150 536.6 674 46.9
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.1e-149 534.6 674 46.9
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 2.0e-148 530.4 674 46.6
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.6e-148 530.0 659 47.2
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 1.0e-147 528.1 674 46.6
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 1.0e-147 528.1 638 47.6
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 9.0e-141 505.0 473 56.0
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 3.9e-136 489.6 617 47.8
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.5e-132 476.1 686 42.0
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.1e-130 471.5 680 42.4
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 5.5e-122 442.6 694 39.2
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 8.0e-113 412.1 565 43.7
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.4e-112 411.4 671 39.3
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 4.0e-104 383.3 330 58.5
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 7.7e-100 369.0 296 63.9
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 4.2e-98 363.2 343 55.7
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 1.1e-93 348.6 508 42.5
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.6e-92 344.7 402 51.5
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 2.6e-87 327.4 308 56.8
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.8e-72 278.1 612 32.8
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 4.1e-61 240.4 265 51.3
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 2.2e-46 191.4 257 44.7
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.1e-40 171.0 222 43.7
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 4.2e-37 160.6 323 35.9
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 8.7e-35 152.9 260 38.5
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.1e-21 109.4 349 27.5
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.0e-19 102.8 174 35.6
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 1.6e-12 79.0 87 50.6
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.5e-10 72.4 121 43.0
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 1.7e-09 68.9 220 27.3


User provided reference genes

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