Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 4.2e-62 241.9 130 100.0
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 9.6e-43 177.6 132 72.7
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.8e-42 176.0 129 72.1
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 2.8e-42 176.0 130 72.3
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 4.8e-42 175.3 131 71.8
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 1.8e-41 173.3 131 71.0
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 3.1e-41 172.6 129 69.8
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 3.1e-41 172.6 131 71.0
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 4.0e-41 172.2 130 71.5
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 5.3e-41 171.8 130 73.8
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 6.9e-41 171.4 130 71.5
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 6.9e-41 171.4 130 71.5
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 6.9e-41 171.4 131 71.8
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 9.0e-41 171.0 126 71.4
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 9.0e-41 171.0 131 71.0
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 2.0e-40 169.9 130 70.8
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 2.0e-40 169.9 131 71.0
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 3.4e-40 169.1 129 69.0
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 3.4e-40 169.1 130 70.0
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 3.4e-40 169.1 131 71.0
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 4.5e-40 168.7 130 70.0
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 4.5e-40 168.7 130 70.8
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 7.6e-40 167.9 130 71.5
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.0e-39 167.5 130 69.2
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.0e-39 167.5 130 70.8
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 1.7e-39 166.8 130 70.8
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 1.7e-39 166.8 130 70.8
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.7e-39 166.8 128 71.9
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 2.2e-39 166.4 129 69.8
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.2e-39 166.4 132 67.4
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 2.9e-39 166.0 130 68.5
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 3.8e-39 165.6 130 70.0
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 5.0e-39 165.2 130 68.5
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 6.5e-39 164.9 130 67.7
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 6.5e-39 164.9 130 70.0
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 1.4e-38 163.7 131 67.9
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 1.9e-38 163.3 130 67.7
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 1.9e-38 163.3 130 67.7
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 2.5e-38 162.9 130 69.2
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 3.2e-38 162.5 131 68.7
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 4.2e-38 162.2 127 70.9
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 9.3e-38 161.0 130 68.5
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 9.3e-38 161.0 130 68.5
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 1.6e-37 160.2 131 66.4
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 2.7e-37 159.5 130 66.2
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.7e-37 159.5 130 66.9
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.7e-37 159.5 130 66.9
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.7e-37 159.5 125 65.6
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 3.5e-37 159.1 131 64.9
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 3.5e-37 159.1 131 65.6
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 3.5e-37 159.1 130 66.2
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 3.5e-37 159.1 130 66.2
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 3.5e-37 159.1 130 67.7
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 4.6e-37 158.7 131 67.2
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 6.1e-37 158.3 130 66.9
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 6.1e-37 158.3 130 67.7
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.3e-36 157.1 130 67.7
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 1.8e-36 156.8 131 65.6
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.8e-36 156.8 131 65.6
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 3.0e-36 156.0 131 64.1
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 3.0e-36 156.0 130 65.4
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 3.9e-36 155.6 128 68.0
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 3.9e-36 155.6 131 63.4
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.9e-36 155.6 128 67.2
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.9e-36 155.6 131 65.6
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.1e-36 155.2 131 65.6
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 8.7e-36 154.5 127 68.5
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.1e-35 154.1 131 64.1
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.5e-35 153.7 128 65.6
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.9e-35 153.3 130 63.1
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 2.5e-35 152.9 131 62.6
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.5e-35 152.9 129 64.3
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 3.3e-35 152.5 130 63.8
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 7.4e-35 151.4 130 63.8
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 7.4e-35 151.4 131 62.6
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 9.7e-35 151.0 131 61.1
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 9.7e-35 151.0 131 61.8
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 1.3e-34 150.6 131 61.8
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 1.3e-34 150.6 131 61.8
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.3e-34 150.6 130 63.8
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 1.3e-34 150.6 129 62.0
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.6e-34 150.2 133 63.2
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 2.2e-34 149.8 131 61.8
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.2e-34 149.8 126 65.1
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 2.2e-34 149.8 130 62.3
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 2.8e-34 149.4 131 61.1
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 3.7e-34 149.1 131 61.1
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 3.7e-34 149.1 131 61.1
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 3.7e-34 149.1 131 61.1
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 3.7e-34 149.1 131 61.1
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 3.7e-34 149.1 131 61.1
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.1e-33 147.5 131 60.3
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.1e-33 147.5 131 61.1
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 2.4e-33 146.4 129 62.8
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 2.4e-33 146.4 118 71.2
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 6.9e-33 144.8 130 60.8
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 6.9e-33 144.8 131 59.5
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.0e-32 143.3 130 60.8
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.6e-32 142.9 131 63.4
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 2.6e-32 142.9 130 60.8
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 7.7e-32 141.4 129 59.7
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 1.0e-31 141.0 128 59.4
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 1.0e-31 141.0 130 60.8
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.0e-31 141.0 128 58.6
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.0e-31 141.0 128 58.6
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 4.2e-30 135.6 130 59.2
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 5.5e-30 135.2 131 58.8
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 7.2e-30 134.8 130 59.2
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 2.7e-29 132.9 127 59.8
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 6.1e-29 131.7 130 58.5
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 1.4e-28 130.6 128 57.0
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 8.8e-28 127.9 133 56.4
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 8.8e-28 127.9 133 56.4
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 1.5e-27 127.1 111 64.0
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 2.5e-27 126.3 134 56.0
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 3.3e-27 125.9 133 55.6
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 3.3e-27 125.9 133 55.6
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 3.3e-27 125.9 133 55.6
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 4.3e-27 125.6 133 55.6
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 4.3e-27 125.6 133 55.6
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 7.4e-27 124.8 133 55.6
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 2.2e-26 123.2 133 54.9
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 2.2e-26 123.2 128 54.7
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 3.7e-26 122.5 133 54.9
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 8.2e-26 121.3 128 53.1
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 2.0e-24 116.7 133 53.4
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 4.5e-24 115.5 95 68.4
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 2.9e-23 112.8 132 53.0
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 1.1e-22 110.9 127 52.0
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.1e-22 110.9 95 62.1
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.6e-21 107.1 89 62.9
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 1.5e-19 100.5 134 50.7
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 1.5e-19 100.5 134 50.7
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 3.3e-19 99.4 130 50.0
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 7.2e-14 81.6 95 51.6
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.2e-13 80.9 63 65.1
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.7e-13 79.7 66 65.2
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 8.2e-10 68.2 60 61.7
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 1.6e-08 63.9 126 35.7


User provided reference genes

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