Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 8.0e-67 256.9 126 100.0
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 3.0e-29 132.1 118 55.9
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.4e-23 113.2 121 47.9
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 1.9e-23 112.8 68 70.6
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.9e-23 112.8 84 63.1
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 2.4e-23 112.5 123 50.4
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 3.2e-23 112.1 105 53.3
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 4.2e-23 111.7 109 52.3
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 5.4e-23 111.3 93 57.0
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 7.1e-23 110.9 119 48.7
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 1.6e-22 109.8 101 53.5
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 1.6e-22 109.8 93 55.9
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.1e-22 109.4 115 48.7
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 2.1e-22 109.4 115 48.7
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 2.1e-22 109.4 72 63.9
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 2.7e-22 109.0 92 55.4
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 2.7e-22 109.0 79 62.0
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 2.7e-22 109.0 79 62.0
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 2.7e-22 109.0 112 52.7
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 3.5e-22 108.6 109 50.5
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 4.6e-22 108.2 82 62.2
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 6.0e-22 107.8 121 47.9
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 7.8e-22 107.5 120 47.5
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 1.0e-21 107.1 90 58.9
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 1.0e-21 107.1 75 61.3
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 1.0e-21 107.1 123 45.5
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 1.7e-21 106.3 104 51.0
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 1.7e-21 106.3 84 56.0
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 2.3e-21 105.9 81 60.5
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 2.3e-21 105.9 109 51.4
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 3.0e-21 105.5 73 64.4
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 3.0e-21 105.5 69 65.2
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 3.0e-21 105.5 106 50.0
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 3.0e-21 105.5 80 62.5
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 3.9e-21 105.1 66 66.7
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 3.9e-21 105.1 77 63.6
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 6.6e-21 104.4 103 51.5
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 6.6e-21 104.4 125 45.6
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 6.6e-21 104.4 98 53.1
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 6.6e-21 104.4 71 62.0
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 1.1e-20 103.6 112 49.1
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.1e-20 103.6 123 45.5
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.1e-20 103.6 81 58.0
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 1.5e-20 103.2 115 47.0
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.5e-20 103.2 61 70.5
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.9e-20 102.8 62 69.4
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.9e-20 102.8 110 50.0
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 2.5e-20 102.4 105 43.8
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 3.3e-20 102.1 81 58.0
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 4.3e-20 101.7 79 60.8
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 4.3e-20 101.7 124 43.5
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 5.6e-20 101.3 82 58.5
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 7.3e-20 100.9 95 52.6
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 7.3e-20 100.9 103 51.5
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 7.3e-20 100.9 118 48.3
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 7.3e-20 100.9 118 48.3
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 9.6e-20 100.5 86 57.0
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 9.6e-20 100.5 59 72.9
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 9.6e-20 100.5 59 72.9
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 9.6e-20 100.5 81 58.0
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 1.3e-19 100.1 90 54.4
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 1.3e-19 100.1 97 49.5
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 1.3e-19 100.1 118 48.3
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.6e-19 99.8 113 46.9
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 1.6e-19 99.8 103 50.5
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 2.1e-19 99.4 80 56.2
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.1e-19 99.4 59 72.9
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 2.8e-19 99.0 78 59.0
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 2.8e-19 99.0 103 45.6
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 3.6e-19 98.6 106 45.3
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 4.8e-19 98.2 60 68.3
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 4.8e-19 98.2 78 59.0
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 4.8e-19 98.2 109 47.7
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 8.1e-19 97.4 73 58.9
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 1.1e-18 97.1 66 65.2
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 4.0e-18 95.1 109 46.8
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 4.0e-18 95.1 104 47.1
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 4.0e-18 95.1 81 56.8
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 4.0e-18 95.1 75 57.3
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 5.3e-18 94.7 119 45.4
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 5.3e-18 94.7 109 45.9
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 5.3e-18 94.7 134 41.8
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 5.3e-18 94.7 98 48.0
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 5.3e-18 94.7 126 38.9
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 6.9e-18 94.4 83 54.2
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 1.2e-17 93.6 86 51.2
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.2e-17 93.6 97 48.5
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.2e-17 93.6 70 60.0
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.5e-17 93.2 99 48.5
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.5e-17 93.2 68 58.8
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.0e-17 92.8 121 43.0
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 2.6e-17 92.4 75 60.0
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 9.9e-17 90.5 57 66.7
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 1.3e-16 90.1 52 71.2
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 2.2e-16 89.4 85 48.2
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 2.2e-16 89.4 85 48.2
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 6.4e-16 87.8 117 43.6
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.1e-15 87.0 54 68.5
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 9.3e-15 84.0 68 57.4
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.2e-14 83.6 69 55.1
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.7e-13 79.7 88 45.5
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 8.1e-11 70.9 80 43.8
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 1.1e-10 70.5 49 63.3


User provided reference genes

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