Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008624 Vanilla planifolia HOM05D000590 ORTHO05D001713 5.1e-90 334.3 164 100.0
HPP92_008738 Vanilla planifolia HOM05D000590 ORTHO05D001713 1.1e-71 273.5 165 85.5
Nn3g19005 Nelumbo nucifera HOM05D000590 ORTHO05D001713 4.6e-14 82.0 157 33.8
Nn1g00224 Nelumbo nucifera HOM05D000590 ORTHO05D001713 1.1e-12 77.4 141 36.9
Duzib205G1581 Durio zibethinus HOM05D000590 ORTHO05D001713 3.3e-12 75.9 137 35.8
Thecc.03G197100 Theobroma cacao HOM05D000590 ORTHO05D001713 4.7e-11 72.0 161 33.5
Dinv35325 Davidia involucrata HOM05D000590 ORTHO05D001713 1.4e-10 70.5 152 34.9
TAR629G1215 Trochodendron aralioides HOM05D000590 ORTHO05D001713 1.4e-10 70.5 163 31.3
TAR375G0182 Trochodendron aralioides HOM05D000590 ORTHO05D001713 1.8e-10 70.1 163 33.1
COL.COLO4_11266 Corchorus olitorius HOM05D000590 ORTHO05D001713 2.4e-10 69.7 162 31.5
Gohir.D04G002000 Gossypium hirsutum HOM05D000590 ORTHO05D001713 2.4e-10 69.7 138 37.7
Gohir.A05G414100 Gossypium hirsutum HOM05D000590 ORTHO05D001713 4.0e-10 68.9 138 37.7
Gorai.012G003100 Gossypium raimondii HOM05D000590 ORTHO05D001713 1.2e-09 67.4 138 37.7
Ca_16699_v3 Cicer arietinum L. HOM05D000590 ORTHO05D001713 7.6e-09 64.7 137 34.3
MD01G1220300 Malus domestica HOM05D000590 ORTHO05D001713 1.3e-08 63.9 164 30.5
Prupe.2G311000 Prunus persica HOM05D000590 ORTHO05D001713 1.7e-08 63.5 167 32.9
Sc19g0000850 Simmondsia chinensis HOM05D000590 ORTHO05D001713 2.2e-08 63.2 159 27.0
TPR.G23333 Trifolium pratense HOM05D000590 ORTHO05D001713 2.2e-08 63.2 114 33.3
TAR636G2428 Trochodendron aralioides HOM05D000590 ORTHO05D001713 2.2e-08 63.2 161 29.2
arahy.Tifrunner.gnm1.ann1.E3AN2D Arachis hypogaea HOM05D000590 ORTHO05D001713 2.9e-08 62.8 88 40.9
arahy.Tifrunner.gnm1.ann1.SPP5W5 Arachis hypogaea HOM05D000590 ORTHO05D001713 2.9e-08 62.8 88 40.9
Duzib084G1179 Durio zibethinus HOM05D000590 ORTHO05D001713 2.9e-08 62.8 156 31.4
CsaV3_3G019960 Cucumis sativus L. HOM05D000590 ORTHO05D001713 3.8e-08 62.4 164 28.7
Psat5g077640 Pisum sativum HOM05D000590 ORTHO05D001713 4.9e-08 62.0 135 34.8
MELO3C008490.2 Cucumis melo HOM05D000590 ORTHO05D001713 6.4e-08 61.6 164 29.9
FAN01G1788 Fragaria x ananassa HOM05D000590 ORTHO05D001713 6.4e-08 61.6 139 35.3
Manes.14G006400 Manihot esculenta HOM05D000590 ORTHO05D001713 6.4e-08 61.6 165 32.1
FAN10G1590 Fragaria x ananassa HOM05D000590 ORTHO05D001713 8.4e-08 61.2 136 33.8
Haze_00225 Corylus avellana HOM05D000590 ORTHO05D001713 1.4e-07 60.5 161 32.3
Gorai.008G269400 Gossypium raimondii HOM05D000590 ORTHO05D001713 1.4e-07 60.5 139 35.3
Lj1C1015G9 Lonicera japonica HOM05D000590 ORTHO05D001713 1.4e-07 60.5 140 35.0
Cfa016217 Carpinus fangiana HOM05D000590 ORTHO05D001713 1.9e-07 60.1 161 31.7
vmacro06539 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 2.4e-07 59.7 165 32.1
ClCG05G008880 Citrullus lanatus HOM05D000590 ORTHO05D001713 3.2e-07 59.3 133 32.3
Atru.chr2.1744 Acer truncatum HOM05D000590 ORTHO05D001713 5.4e-07 58.5 171 31.6
Gohir.D12G251300 Gossypium hirsutum HOM05D000590 ORTHO05D001713 5.4e-07 58.5 137 33.6
Cpa.g.sc3.73 Carica papaya HOM05D000590 ORTHO05D001713 7.1e-07 58.2 137 33.6
Gohir.A12G250500 Gossypium hirsutum HOM05D000590 ORTHO05D001713 7.1e-07 58.2 137 33.6
Medtr3g091310 Medicago truncatula HOM05D000590 ORTHO05D001713 1.2e-06 57.4 115 35.7
TWI39G0115 Tripterygium wilfordii HOM05D000590 ORTHO05D001713 1.6e-06 57.0 136 31.6
RcHm_v2.0_Chr1g0380891 Rosa chinensis HOM05D000590 ORTHO05D001713 2.7e-06 56.2 140 35.0
Rhsim03G0207900 Rhododendron simsii HOM05D000590 ORTHO05D001713 6.0e-06 55.1 168 30.4
CSS0007436 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D001713 7.8e-06 54.7 178 30.3
CSS0014100 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D001713 7.8e-06 54.7 178 30.9
Ciclev10018614m.g Citrus clementina HOM05D000590 ORTHO05D001713 7.8e-06 54.7 133 35.3
FAN06G0024 Fragaria x ananassa HOM05D000590 ORTHO05D001713 7.8e-06 54.7 138 33.3
FAN06G1873 Fragaria x ananassa HOM05D000590 ORTHO05D001713 7.8e-06 54.7 138 33.3


User provided reference genes

Program Settings