Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008566 Vanilla planifolia HOM05D005682 ORTHO05D007050 1.4e-93 346.3 180 100.0
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 1.8e-51 206.5 177 66.1
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 2.1e-20 103.2 177 37.3
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 1.3e-17 94.0 179 36.3
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 1.3e-17 94.0 179 33.5
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 1.7e-17 93.6 170 35.3
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 2.9e-17 92.8 179 34.1
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 1.2e-15 87.4 179 33.5
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 1.2e-15 87.4 179 34.6
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 1.2e-15 87.4 172 35.5
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 2.0e-15 86.7 168 32.7
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 2.7e-15 86.3 177 33.3
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 7.8e-15 84.7 180 33.3
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 7.8e-15 84.7 181 34.3
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 1.3e-14 84.0 169 30.8
Nitab4.5_0028170g0010 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.7e-14 83.6 179 34.6
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 2.3e-14 83.2 175 31.4
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 3.9e-14 82.4 179 30.7
Ciclev10030666m.g Citrus clementina HOM05D005682 ORTHO05D007050 5.0e-14 82.0 177 31.6
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 6.6e-14 81.6 181 32.0
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 6.6e-14 81.6 178 33.7
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 8.6e-14 81.3 169 31.4
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 8.6e-14 81.3 172 34.3
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 8.6e-14 81.3 178 33.7
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 1.1e-13 80.9 172 34.3
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 1.1e-13 80.9 178 32.0
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 1.5e-13 80.5 178 31.5
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 1.9e-13 80.1 161 34.8
Nitab4.5_0000139g0140 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.9e-13 80.1 179 31.3
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 2.5e-13 79.7 183 31.1
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 2.5e-13 79.7 179 33.0
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 3.3e-13 79.3 176 33.0
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 4.3e-13 79.0 171 28.1
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 5.6e-13 78.6 167 34.7
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 7.3e-13 78.2 180 33.3
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 1.2e-12 77.4 171 28.1
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 1.2e-12 77.4 168 31.0
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea HOM05D005682 ORTHO05D007050 2.1e-12 76.6 167 31.1
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 2.1e-12 76.6 181 34.3
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 2.1e-12 76.6 166 33.1
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 2.8e-12 76.3 167 31.1
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 2.8e-12 76.3 180 30.6
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 3.6e-12 75.9 163 34.4
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 3.6e-12 75.9 183 30.6
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 3.6e-12 75.9 175 32.6
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 4.7e-12 75.5 176 34.7
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 6.2e-12 75.1 174 31.6
Peaxi162Scf00363g00730 Petunia axillaris HOM05D005682 ORTHO05D007050 6.2e-12 75.1 184 30.4
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 6.2e-12 75.1 172 30.8
Sopen02g009170 Solanum pennellii HOM05D005682 ORTHO05D007050 8.0e-12 74.7 171 32.7
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.1e-11 74.3 183 32.8
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 1.1e-11 74.3 178 29.2
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 1.1e-11 74.3 171 29.8
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 1.4e-11 73.9 180 30.6
Manes.11G108701 Manihot esculenta HOM05D005682 ORTHO05D007050 1.8e-11 73.6 176 30.7
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 2.3e-11 73.2 178 29.2
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 3.1e-11 72.8 192 30.7
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 3.1e-11 72.8 186 31.2
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 3.1e-11 72.8 173 30.6
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 4.0e-11 72.4 185 30.8
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 4.0e-11 72.4 174 30.5
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 4.0e-11 72.4 178 30.9
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 5.2e-11 72.0 170 34.1
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 6.8e-11 71.6 178 31.5
CAN.G157.16 Capsicum annuum HOM05D005682 ORTHO05D007050 8.9e-11 71.2 172 30.2
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 1.5e-10 70.5 177 31.1
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 2.0e-10 70.1 166 31.3
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.6e-10 69.7 179 30.2
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 2.6e-10 69.7 171 31.0
BraA05t21816Z Brassica rapa HOM05D005682 ORTHO05D007050 7.5e-10 68.2 171 30.4
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 7.5e-10 68.2 178 29.2
A05p29780 Brassica napus HOM05D005682 ORTHO05D007050 9.8e-10 67.8 171 30.4
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 9.8e-10 67.8 178 28.1
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 9.8e-10 67.8 171 30.4
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 1.3e-09 67.4 164 31.7
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 2.9e-09 66.2 170 30.0
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 3.7e-09 65.9 171 30.4
C05p45010 Brassica napus HOM05D005682 ORTHO05D007050 3.7e-09 65.9 170 30.0
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 4.9e-09 65.5 172 30.8
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 6.4e-09 65.1 175 26.9
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 8.3e-09 64.7 160 33.1
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 8.3e-09 64.7 178 28.1
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 1.1e-08 64.3 170 29.4
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 1.1e-08 64.3 161 31.7
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 2.4e-08 63.2 177 27.7
CARHR095300 Cardamine hirsuta HOM05D005682 ORTHO05D007050 2.4e-08 63.2 175 26.3
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 3.2e-08 62.8 176 26.7
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 4.1e-08 62.4 183 27.9
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 6.0e-07 58.5 178 28.7
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 2.3e-06 56.6 175 24.0
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 3.9e-06 55.8 176 24.4


User provided reference genes

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