Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 0.0e+00 1695.2 857 100.0
HPP92_008567 Vanilla planifolia HOM05D005682 ORTHO05D007050 5.9e-153 545.8 298 93.0
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 1.3e-115 421.8 831 36.3
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 2.3e-112 411.0 823 35.2
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 6.8e-109 399.4 797 33.9
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 1.5e-108 398.3 809 35.1
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 4.4e-108 396.7 815 34.2
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 7.0e-106 389.4 762 35.3
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 2.7e-105 387.5 796 34.7
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 7.8e-105 386.0 769 34.5
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 2.9e-104 384.0 764 36.4
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 5.0e-104 383.3 888 33.1
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 6.6e-104 382.9 796 33.7
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 2.5e-103 380.9 745 34.8
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 5.6e-103 379.8 795 35.2
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 9.5e-103 379.0 773 34.8
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 4.7e-102 376.7 792 33.8
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 1.0e-101 375.6 828 33.1
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 4.0e-101 373.6 803 33.0
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 4.0e-101 373.6 789 34.2
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 1.2e-100 372.1 861 32.4
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 1.2e-100 372.1 792 33.1
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 4.4e-100 370.2 764 33.8
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 9.8e-100 369.0 791 33.1
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 5.4e-98 363.2 819 32.5
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 1.6e-97 361.7 798 32.8
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 1.3e-96 358.6 763 34.2
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 8.6e-96 355.9 821 32.6
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 9.5e-95 352.4 752 32.3
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 2.8e-94 350.9 783 31.7
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 3.1e-93 347.4 803 32.1
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 4.0e-93 347.1 765 34.2
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 4.0e-93 347.1 774 31.7
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 6.8e-93 346.3 752 33.1
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 2.0e-92 344.7 748 33.7
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 2.6e-92 344.4 774 31.9
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 9.8e-92 342.4 784 34.3
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 1.3e-91 342.0 758 33.2
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 2.9e-91 340.9 734 32.3
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 6.4e-91 339.7 774 31.8
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 1.1e-90 339.0 722 32.3
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 3.2e-90 337.4 793 30.8
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 4.1e-90 337.0 861 30.7
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 4.1e-90 337.0 732 33.6
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 4.1e-90 337.0 753 32.3
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 5.4e-90 336.7 731 33.5
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 1.7e-88 331.6 799 31.0
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 2.3e-88 331.3 796 30.4
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 3.3e-87 327.4 783 30.9
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 4.3e-87 327.0 772 32.0
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 5.6e-87 326.6 751 32.0
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 2.1e-86 324.7 790 30.6
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 8.1e-86 322.8 787 30.5
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 8.1e-86 322.8 793 30.1
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 1.8e-85 321.6 780 31.5
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 3.1e-85 320.9 779 30.8
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 4.0e-85 320.5 778 31.4
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 7.6e-84 316.2 780 31.7
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 1.1e-82 312.4 760 31.3
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 1.9e-82 311.6 757 31.8
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 4.1e-82 310.5 775 29.4
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 6.0e-81 306.6 734 30.9
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 7.8e-81 306.2 716 31.0
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 3.9e-80 303.9 466 39.3
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 1.9e-79 301.6 726 31.4
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 7.3e-79 299.7 780 30.3
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 2.1e-78 298.1 524 37.2
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 2.1e-78 298.1 788 27.9
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 6.2e-78 296.6 789 29.4
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 1.2e-76 292.4 748 29.0
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 2.0e-76 291.6 764 29.6
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 2.9e-75 287.7 733 31.4
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 8.4e-75 286.2 751 31.3
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 3.3e-71 274.2 713 29.5
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 9.6e-71 272.7 737 28.0
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 1.1e-69 269.2 768 31.2
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 5.1e-64 250.4 668 28.7
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 1.8e-61 241.9 715 27.3
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 4.0e-61 240.7 878 26.3
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 4.6e-57 227.3 368 35.9
Ciclev10030666m.g Citrus clementina HOM05D005682 ORTHO05D007050 2.5e-55 221.5 553 30.2
CDE04G1313 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 3.4e-52 211.1 268 42.9
Manes.11G108701 Manihot esculenta HOM05D005682 ORTHO05D007050 7.6e-52 209.9 547 31.1
Sopen02g009170 Solanum pennellii HOM05D005682 ORTHO05D007050 1.3e-51 209.1 582 30.6
HPP92_008566 Vanilla planifolia HOM05D005682 ORTHO05D007050 1.1e-50 206.1 177 66.1
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 3.2e-50 204.5 554 30.9
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 5.5e-50 203.8 672 30.5
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 2.7e-49 201.4 323 38.1
Solyc02g055460.3 Solanum lycopersicum HOM05D005682 ORTHO05D007050 3.5e-49 201.1 528 31.2
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea HOM05D005682 ORTHO05D007050 1.5e-47 195.7 631 27.7
SHI13894 Sapria himalayana HOM05D005682 ORTHO05D007050 2.5e-47 194.9 305 36.7
Peaxi162Scf00363g00730 Petunia axillaris HOM05D005682 ORTHO05D007050 3.7e-46 191.0 543 29.7
COL.COLO4_08119 Corchorus olitorius HOM05D005682 ORTHO05D007050 5.0e-43 180.6 189 49.7
BraA05t21816Z Brassica rapa HOM05D005682 ORTHO05D007050 1.4e-42 179.1 552 26.8
C05p45010 Brassica napus HOM05D005682 ORTHO05D007050 2.5e-42 178.3 553 27.1
A05p29780 Brassica napus HOM05D005682 ORTHO05D007050 4.6e-41 174.1 555 27.4
Solyc02g055470.2 Solanum lycopersicum HOM05D005682 ORTHO05D007050 1.0e-40 172.9 176 48.3
Sopen02g009200 Solanum pennellii HOM05D005682 ORTHO05D007050 1.0e-40 172.9 148 54.1
CAN.G157.17 Capsicum annuum HOM05D005682 ORTHO05D007050 1.8e-40 172.2 258 38.0
A05p29790 Brassica napus HOM05D005682 ORTHO05D007050 7.4e-39 166.8 182 50.5
AagrBONN_evm.TU.Sc2ySwM_340.174 Anthoceros agrestis HOM05D005682 ORTHO05D007050 8.5e-35 153.3 791 24.8
Cc11_g04390 Coffea canephora HOM05D005682 ORTHO05D007050 7.4e-31 140.2 288 34.4
Os10g0485100 Oryza sativa ssp. japonica HOM05D005682 ORTHO05D007050 6.9e-29 133.7 122 54.9
Nitab4.5_0028170g0010 Nicotiana tabacum HOM05D005682 ORTHO05D007050 3.4e-28 131.3 460 28.5
CSS0001307 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 7.7e-28 130.2 174 40.8
Nitab4.5_0002392g0020 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.7e-27 129.0 140 47.9
Nitab4.5_0000139g0140 Nicotiana tabacum HOM05D005682 ORTHO05D007050 2.9e-27 128.3 427 29.7
Nitab4.5_0000139g0150 Nicotiana tabacum HOM05D005682 ORTHO05D007050 8.5e-27 126.7 121 50.4
CAN.G157.16 Capsicum annuum HOM05D005682 ORTHO05D007050 5.5e-26 124.0 445 29.9
CDE04G1407 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 2.3e-24 118.6 343 30.3
CSS0031646 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 3.7e-22 111.3 111 51.4
Dinv11710 Davidia involucrata HOM05D005682 ORTHO05D007050 7.7e-20 103.6 101 50.5
CARHR095300 Cardamine hirsuta HOM05D005682 ORTHO05D007050 8.5e-19 100.1 441 25.4
Hma1.2p1_0499F.1_g166820 Hydrangea macrophylla HOM05D005682 ORTHO05D007050 1.2e-17 96.3 83 51.8
Peaxi162Scf00363g00073 Petunia axillaris HOM05D005682 ORTHO05D007050 1.6e-17 95.9 86 53.5
CSS0026201 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 2.1e-17 95.5 142 38.0
SHI13893 Sapria himalayana HOM05D005682 ORTHO05D007050 8.8e-16 90.1 415 25.5
Pp3c7_6630 Physcomitrium patens HOM05D005682 ORTHO05D007050 1.1e-15 89.7 389 23.4
Aqoxy2G03797 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.6e-15 88.6 103 45.6
SMO367G0225 Selaginella moellendorffii HOM05D004192 ORTHO05D004917 9.7e-15 86.7 735 22.4
C05p44920 Brassica napus HOM05D005682 ORTHO05D007050 1.7e-14 85.9 138 34.1
BcaC05g28417 Brassica carinata HOM05D005682 ORTHO05D007050 3.5e-12 78.2 72 51.4
CBR_g66815 Chara braunii HOM05D005682 ORTHO05D007050 4.5e-12 77.8 152 30.9
Psat4g043640 Pisum sativum HOM05D005682 ORTHO05D007050 1.2e-07 63.2 101 37.6
FvH4_6g37553 Fragaria vesca HOM05D005682 ORTHO05D007050 3.7e-06 58.2 80 38.8


User provided reference genes

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