Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008519 Vanilla planifolia HOM05D027230 ORTHO05D037086 8.1e-116 420.6 243 100.0
HPP92_008524 Vanilla planifolia HOM05D027230 ORTHO05D037086 3.5e-87 325.5 157 98.7
HPP92_008522 Vanilla planifolia HOM05D000009 ORTHO05D026213 1.3e-33 147.5 132 82.6
Os10g0507150 Oryza sativa ssp. japonica HOM05D027230 ORTHO05D037086 8.3e-28 128.3 234 31.2
Zm00001eb044020 Zea mays HOM05D000009 ORTHO05D000008 8.0e-23 111.7 159 36.5
HPP92_008515 Vanilla planifolia HOM05D027230 ORTHO05D429198 2.3e-22 110.2 94 78.7
MBI09_g40720_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D000008 1.2e-13 81.3 164 33.5
Nn5g28060 Nelumbo nucifera HOM05D000009 ORTHO05D000008 1.2e-10 71.2 150 35.3
Lj6A193T34 Lonicera japonica HOM05D000009 ORTHO05D004635 1.6e-10 70.9 184 29.9
FvH4_7g02890 Fragaria vesca HOM05D000009 ORTHO05D000008 3.9e-09 66.2 144 31.9
FAN03G0120 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.9e-09 66.2 144 31.9
FAN06G0610 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-08 64.7 144 31.9
Manes.10G112000 Manihot esculenta HOM05D000009 ORTHO05D000008 1.1e-08 64.7 145 36.6
Aqoxy2G02945 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 4.3e-08 62.8 167 31.1
Aqoxy311s004 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 4.3e-08 62.8 167 31.1
QL02p066101 Quercus lobata HOM05D000009 ORTHO05D000008 4.3e-08 62.8 146 28.8
Lj8C513T7 Lonicera japonica HOM05D000009 ORTHO05D000008 5.6e-08 62.4 139 34.5
QL08p020906 Quercus lobata HOM05D000009 ORTHO05D000008 5.6e-08 62.4 144 30.6
MBI13_g19377_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D006588 7.3e-08 62.0 148 37.2
Manes.10G133713 Manihot esculenta HOM05D000009 ORTHO05D000008 7.3e-08 62.0 134 33.6
Cc00_g11560 Coffea canephora HOM05D000009 ORTHO05D000008 9.5e-08 61.6 177 30.5
Lj6P203T21 Lonicera japonica HOM05D000009 ORTHO05D004635 9.5e-08 61.6 122 35.2
TAR636G2073 Trochodendron aralioides HOM05D000009 ORTHO05D000008 9.5e-08 61.6 169 30.8
Lj6C174G3 Lonicera japonica HOM05D000009 ORTHO05D000008 1.2e-07 61.2 134 34.3
CANSAT80G0029 Cannabis sativa HOM05D000009 ORTHO05D000008 1.6e-07 60.8 162 25.3
Dinv41776 Davidia involucrata HOM05D000009 ORTHO05D000008 2.1e-07 60.5 150 34.7
Lj6P176T18 Lonicera japonica HOM05D000009 ORTHO05D004635 2.1e-07 60.5 123 36.6
MD03G1016000 Malus domestica HOM05D000009 ORTHO05D000008 2.1e-07 60.5 125 34.4
QL11p004429 Quercus lobata HOM05D000009 ORTHO05D000008 2.1e-07 60.5 161 28.0
Potri.001G025400 Populus trichocarpa HOM05D000009 ORTHO05D000008 2.8e-07 60.1 132 32.6
Nn2g15159 Nelumbo nucifera HOM05D000009 ORTHO05D000008 4.7e-07 59.3 135 31.9
Thecc.01G403600 Theobroma cacao HOM05D000009 ORTHO05D000008 4.7e-07 59.3 148 32.4
Cc01_g01600 Coffea canephora HOM05D000009 ORTHO05D000008 8.0e-07 58.5 165 30.9
Cpa.g.sc10.212 Carica papaya HOM05D000009 ORTHO05D000008 1.1e-06 58.2 163 31.3
Manes.10G133659 Manihot esculenta HOM05D000009 ORTHO05D000008 1.1e-06 58.2 155 34.2
MBI13_g15304_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D006588 1.4e-06 57.8 147 34.7
Medtr5g071823 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-06 57.4 139 30.9
Medtr5g071850 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-06 57.4 139 30.9
EL10Ac5g10651 Beta vulgaris HOM05D000009 ORTHO05D000008 2.3e-06 57.0 170 32.9
Duzib212G0300 Durio zibethinus HOM05D000009 ORTHO05D017860 3.1e-06 56.6 160 30.0
Manes.10G091600 Manihot esculenta HOM05D000009 ORTHO05D000008 3.1e-06 56.6 148 29.1
TPR.G24032 Trifolium pratense HOM05D000009 ORTHO05D000008 3.1e-06 56.6 148 30.4
TAR636G0085 Trochodendron aralioides HOM05D000009 ORTHO05D000008 3.1e-06 56.6 111 36.9
CANSAT54G1926 Cannabis sativa HOM05D000009 ORTHO05D000008 4.0e-06 56.2 157 31.8
Lj8C487T4 Lonicera japonica HOM05D000009 ORTHO05D000008 4.0e-06 56.2 129 34.9
Manes.04G165600 Manihot esculenta HOM05D000009 ORTHO05D000008 4.0e-06 56.2 150 29.3
Manes.14G165300 Manihot esculenta HOM05D000009 ORTHO05D000008 4.0e-06 56.2 147 29.9
Phvul.001G132632 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.2e-06 55.8 167 32.3
GSVIVG01005320001 Vitis vinifera HOM05D000009 ORTHO05D000008 5.2e-06 55.8 148 32.4
CiPaw.13G135700 Carya illinoinensis HOM05D000009 ORTHO05D000008 8.9e-06 55.1 129 33.3
Manes.10G133668 Manihot esculenta HOM05D000009 ORTHO05D000008 8.9e-06 55.1 165 29.1


User provided reference genes

Program Settings