Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 4.8e-97 357.8 182 100.0
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.1e-80 303.5 159 98.1
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 7.0e-56 221.1 183 63.4
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 7.0e-56 221.1 181 61.9
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 1.7e-54 216.5 183 61.7
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 3.9e-54 215.3 185 60.0
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 1.1e-53 213.8 184 63.0
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 1.1e-53 213.8 183 62.3
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 3.3e-53 212.2 183 61.2
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 4.3e-53 211.8 183 60.7
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 5.6e-53 211.5 185 58.9
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 5.6e-53 211.5 184 58.2
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 7.3e-53 211.1 183 61.2
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 2.1e-52 209.5 183 60.7
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 3.6e-52 208.8 183 61.2
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 3.6e-52 208.8 184 59.8
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 4.7e-52 208.4 149 70.5
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 4.7e-52 208.4 149 70.5
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 8.0e-52 207.6 183 59.0
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 1.0e-51 207.2 183 60.7
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.0e-51 207.2 180 61.7
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.4e-51 206.8 183 59.0
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.8e-51 206.5 185 61.6
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 1.8e-51 206.5 183 60.1
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 1.8e-51 206.5 183 59.0
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.3e-51 206.1 188 60.6
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 2.3e-51 206.1 183 56.8
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.1e-51 205.7 183 60.1
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 1.2e-50 203.8 184 59.8
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 1.2e-50 203.8 183 59.0
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 1.2e-50 203.8 153 66.0
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 1.5e-50 203.4 183 59.0
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 2.0e-50 203.0 184 59.2
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 2.6e-50 202.6 183 57.9
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 3.4e-50 202.2 181 60.8
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 3.4e-50 202.2 183 56.8
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 3.4e-50 202.2 184 59.2
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 5.8e-50 201.4 149 67.8
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 9.8e-50 200.7 182 59.3
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 9.8e-50 200.7 186 59.1
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 1.3e-49 200.3 185 58.9
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 2.2e-49 199.5 152 65.1
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 2.9e-49 199.1 178 58.4
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.9e-49 199.1 178 58.4
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 2.9e-49 199.1 182 59.9
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 2.9e-49 199.1 181 58.6
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 2.9e-49 199.1 183 56.8
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 2.9e-49 199.1 186 57.0
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.7e-49 198.7 181 59.1
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 3.7e-49 198.7 184 58.7
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 3.7e-49 198.7 183 56.8
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 3.7e-49 198.7 183 62.3
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 4.9e-49 198.4 166 65.1
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 4.9e-49 198.4 149 67.1
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 6.4e-49 198.0 183 57.9
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 6.4e-49 198.0 158 63.9
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 6.4e-49 198.0 179 59.8
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 6.4e-49 198.0 183 56.3
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 6.4e-49 198.0 183 56.3
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 8.3e-49 197.6 181 58.6
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 8.3e-49 197.6 183 56.3
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 1.1e-48 197.2 159 62.3
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 1.1e-48 197.2 185 56.2
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.1e-48 197.2 178 59.0
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.1e-48 197.2 185 59.5
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 1.4e-48 196.8 183 56.3
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.4e-48 196.8 183 56.3
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 1.9e-48 196.4 115 83.5
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 3.2e-48 195.7 183 56.3
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 3.2e-48 195.7 179 59.2
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 3.2e-48 195.7 183 57.4
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 3.2e-48 195.7 182 58.8
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 3.2e-48 195.7 178 59.0
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 7.0e-48 194.5 183 56.3
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 7.0e-48 194.5 181 57.5
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 9.2e-48 194.1 188 56.4
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 1.2e-47 193.7 145 66.2
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.2e-47 193.7 146 65.8
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 1.6e-47 193.4 148 64.2
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 2.7e-47 192.6 116 80.2
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 4.6e-47 191.8 119 77.3
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 4.6e-47 191.8 158 60.8
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 7.8e-47 191.0 163 61.3
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.7e-46 189.9 132 69.7
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 1.7e-46 189.9 173 60.7
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.7e-46 189.9 165 57.6
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.7e-46 189.9 144 65.3
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 2.3e-46 189.5 182 54.4
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 2.3e-46 189.5 166 59.6
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 2.3e-46 189.5 169 56.8
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 2.3e-46 189.5 115 79.1
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 5.0e-46 188.3 168 60.1
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 6.6e-46 188.0 163 57.7
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 8.6e-46 187.6 159 60.4
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 8.6e-46 187.6 148 64.2
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 1.1e-45 187.2 160 60.0
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 1.1e-45 187.2 158 59.5
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 1.5e-45 186.8 115 78.3
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.5e-45 186.8 183 52.5
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 1.5e-45 186.8 158 60.1
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 2.5e-45 186.0 184 55.4
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 5.6e-45 184.9 159 60.4
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 5.6e-45 184.9 159 58.5
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 5.6e-45 184.9 117 72.6
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 5.6e-45 184.9 117 72.6
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 7.3e-45 184.5 116 76.7
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 9.5e-45 184.1 183 55.2
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.6e-44 183.3 133 65.4
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 2.8e-44 182.6 183 53.6
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 2.6e-42 176.0 120 71.7
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 5.8e-42 174.9 141 61.7
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 3.7e-41 172.2 136 65.4
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 3.5e-39 165.6 110 69.1
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 7.8e-39 164.5 137 57.7
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 5.1e-38 161.8 115 67.0
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 2.8e-36 156.0 137 54.0
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 2.6e-34 149.4 182 49.5
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.1e-32 144.1 110 64.5
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 1.1e-32 144.1 110 58.2
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 3.0e-30 136.0 108 57.4
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 3.3e-29 132.5 106 56.6
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 1.1e-27 127.5 107 52.3
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 7.3e-21 104.8 59 78.0
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 7.3e-21 104.8 59 78.0
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.1e-16 90.9 68 61.8
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.4e-16 90.5 107 49.5
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 6.0e-15 85.1 109 46.8
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 1.3e-14 84.0 52 75.0
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 3.0e-14 82.8 98 45.9


User provided reference genes

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