Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008063 Vanilla planifolia HOM05D004496 ORTHO05D005513 1.3e-140 503.1 248 100.0
HPP92_023384 Vanilla planifolia HOM05D004496 ORTHO05D005513 2.7e-34 149.8 165 55.2
Nitab4.5_0006125g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 1.4e-22 110.9 195 42.1
Phvul.003G081900 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 2.6e-21 106.7 197 39.1
SalBow8G1688 Salvia bowleyana HOM05D004496 ORTHO05D005513 3.4e-21 106.3 164 45.7
Dinv20109 Davidia involucrata HOM05D004496 ORTHO05D005950 5.9e-21 105.5 159 47.8
Sed0021394 Sechium edule HOM05D004496 ORTHO05D005513 5.9e-21 105.5 157 45.9
MD10G1327300 Malus domestica HOM05D004496 ORTHO05D005513 2.2e-20 103.6 179 42.5
Glyma.15G112200 Glycine max HOM05D004496 ORTHO05D005513 5.0e-20 102.4 145 47.6
Nitab4.5_0009517g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 5.0e-20 102.4 183 40.4
Solyc02g081150.1 Solanum lycopersicum HOM05D004496 ORTHO05D005513 5.0e-20 102.4 197 39.6
Dinv13941 Davidia involucrata HOM05D004496 ORTHO05D005513 1.1e-19 101.3 163 46.0
CAN.G1014.49 Capsicum annuum HOM05D004496 ORTHO05D005513 1.4e-19 100.9 198 38.9
Phvul.006G145400 Phaseolus vulgaris HOM05D004496 ORTHO05D005513 1.4e-19 100.9 151 47.0
PGSC0003DMG400016725 Solanum tuberosum HOM05D004496 ORTHO05D005513 1.9e-19 100.5 182 40.7
Ciclev10015792m.g Citrus clementina HOM05D004496 ORTHO05D005513 3.2e-19 99.8 207 39.1
BcaC09g51153 Brassica carinata HOM05D004496 ORTHO05D005513 7.2e-19 98.6 171 41.5
BcaNung03755 Brassica carinata HOM05D004496 ORTHO05D005513 7.2e-19 98.6 172 40.7
BcaNung03756 Brassica carinata HOM05D004496 ORTHO05D005513 7.2e-19 98.6 160 41.9
A01p13560 Brassica napus HOM05D004496 ORTHO05D005513 7.2e-19 98.6 171 41.5
C01p16430 Brassica napus HOM05D004496 ORTHO05D005513 7.2e-19 98.6 171 41.5
BolC1t01593H Brassica oleracea HOM05D004496 ORTHO05D005513 7.2e-19 98.6 171 41.5
BraA01t01298Z Brassica rapa HOM05D004496 ORTHO05D005513 7.2e-19 98.6 171 41.5
Nn1g03388 Nelumbo nucifera HOM05D004496 ORTHO05D005513 7.2e-19 98.6 162 44.4
Sp7g20330 Schrenkiella parvula HOM05D004496 ORTHO05D005513 9.4e-19 98.2 169 41.4
Sopen02g025790 Solanum pennellii HOM05D004496 ORTHO05D005513 9.4e-19 98.2 197 38.6
Glyma.09G007852 Glycine max HOM05D004496 ORTHO05D005513 1.6e-18 97.4 140 45.7
MSTRG.7183 Avicennia marina HOM05D004496 ORTHO05D005513 2.7e-18 96.7 181 39.8
TAR624G0763 Trochodendron aralioides HOM05D001218 ORTHO05D003142 2.7e-18 96.7 162 43.2
Lsat_1_v5_gn_7_14880 Lactuca sativa HOM05D004496 ORTHO05D005513 4.6e-18 95.9 177 41.8
Thhalv10025698m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 6.1e-18 95.5 172 40.1
Psat1g175480 Pisum sativum HOM05D004496 ORTHO05D005513 6.1e-18 95.5 177 39.0
Migut.M01368 Erythranthe guttata HOM05D004496 ORTHO05D005513 7.9e-18 95.1 187 41.2
Peaxi162Scf00708g00013 Petunia axillaris HOM05D004496 ORTHO05D005513 1.0e-17 94.7 189 39.2
Thecc.06G228600 Theobroma cacao HOM05D004496 ORTHO05D005513 1.0e-17 94.7 173 41.0
MSTRG.13128 Avicennia marina HOM05D004496 ORTHO05D005513 1.4e-17 94.4 182 37.9
Nn1g07279 Nelumbo nucifera HOM05D004496 ORTHO05D005513 2.3e-17 93.6 174 41.4
AL7G31460 Arabidopsis lyrata HOM05D004496 ORTHO05D005513 3.0e-17 93.2 149 41.6
Carub.0007s1912 Capsella rubella HOM05D004496 ORTHO05D005513 3.0e-17 93.2 153 41.2
Medtr2g024980 Medicago truncatula HOM05D004496 ORTHO05D005513 3.0e-17 93.2 162 39.5
Sc17g0007590 Simmondsia chinensis HOM05D004496 ORTHO05D005513 3.0e-17 93.2 150 42.7
Duzib235G0420 Durio zibethinus HOM05D004496 ORTHO05D005513 3.9e-17 92.8 156 44.2
CARHR229080 Cardamine hirsuta HOM05D004496 ORTHO05D005513 5.1e-17 92.4 147 41.5
Gohir.D05G176300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 5.1e-17 92.4 169 39.6
TWI38G0464 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 5.1e-17 92.4 167 41.9
A03p53360 Brassica napus HOM05D004496 ORTHO05D005513 8.8e-17 91.7 166 41.0
FvH4_3g01370 Fragaria vesca HOM05D004496 ORTHO05D005513 8.8e-17 91.7 174 40.8
Lj2P264T22 Lonicera japonica HOM05D004496 ORTHO05D005513 8.8e-17 91.7 203 37.9
FAN25G1366 Fragaria x ananassa HOM05D004496 ORTHO05D005513 1.5e-16 90.9 179 39.1
RcHm_v2.0_Chr5g0001991 Rosa chinensis HOM05D004496 ORTHO05D005513 1.5e-16 90.9 163 41.1
C07p51660 Brassica napus HOM05D004496 ORTHO05D005513 3.3e-16 89.7 166 42.8
CiPaw.09G098400 Carya illinoinensis HOM05D004496 ORTHO05D005513 4.3e-16 89.4 160 41.2
Ca_00696_v3 Cicer arietinum L. HOM05D004496 ORTHO05D005513 4.3e-16 89.4 151 41.1
Sabra11G0008600 Salix brachista HOM05D004496 ORTHO05D005513 4.3e-16 89.4 178 39.9
Sabra11G0010200 Salix brachista HOM05D004496 ORTHO05D005513 4.3e-16 89.4 178 39.9
THA.LOC104812981 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 4.3e-16 89.4 184 39.1
CiPaw.10G074800 Carya illinoinensis HOM05D004496 ORTHO05D005513 5.7e-16 89.0 156 40.4
Duzib192G0344 Durio zibethinus HOM05D004496 ORTHO05D005513 5.7e-16 89.0 169 37.9
CANSAT56G2524 Cannabis sativa HOM05D004496 ORTHO05D005513 7.4e-16 88.6 191 36.6
VMungo1215G0904 Vigna mungo HOM05D004496 ORTHO05D005513 7.4e-16 88.6 169 37.9
BcaNung00807 Brassica carinata HOM05D004496 ORTHO05D005513 9.7e-16 88.2 143 45.5
Peaxi162Scf00294g00097 Petunia axillaris HOM05D004496 ORTHO05D005513 9.7e-16 88.2 162 42.6
arahy.Tifrunner.gnm1.ann1.SI7QTZ Arachis hypogaea HOM05D004496 ORTHO05D005513 1.3e-15 87.8 163 39.3
Aa31LG6G4310 Aethionema arabicum HOM05D004496 ORTHO05D005513 1.7e-15 87.4 161 42.2
THA.LOC104806318 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 1.7e-15 87.4 155 40.0
ECA236G1118 Erigeron canadensis HOM05D004496 ORTHO05D005513 2.2e-15 87.0 182 37.9
EL10Ac8g20132 Beta vulgaris HOM05D004496 ORTHO05D005513 2.8e-15 86.7 139 42.4
CSS0046352 Camellia sinensis var. sinensis HOM05D004496 ORTHO05D005513 2.8e-15 86.7 173 39.9
BcaNung01704 Brassica carinata HOM05D004496 ORTHO05D005513 3.7e-15 86.3 166 41.0
Manes.16G002700 Manihot esculenta HOM05D004496 ORTHO05D005513 3.7e-15 86.3 143 44.1
CDE07G1551 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 4.8e-15 85.9 164 37.2
PGR042G2934 Punica granatum HOM05D004496 ORTHO05D005513 6.3e-15 85.5 168 39.3
Ah.09g234500 Amaranthus hybridus HOM05D004496 ORTHO05D005950 8.2e-15 85.1 137 43.1
Lalb_Chr15g0087811 Lupinus albus HOM05D004496 ORTHO05D005513 8.2e-15 85.1 169 40.2
Nitab4.5_0000005g0040 Nicotiana tabacum HOM05D004496 ORTHO05D005513 8.2e-15 85.1 172 37.8
arahy.Tifrunner.gnm1.ann1.EH65IB Arachis hypogaea HOM05D004496 ORTHO05D005513 1.4e-14 84.3 163 38.7
Potri.011G015500 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.8e-14 84.0 170 40.0
Rhsim13G0149900 Rhododendron simsii HOM05D004496 ORTHO05D005513 1.8e-14 84.0 167 39.5
GSVIVG01004818001 Vitis vinifera HOM05D004496 ORTHO05D005513 1.8e-14 84.0 109 50.5
Lj6g0013804 Lotus japonicus HOM05D004496 ORTHO05D005513 2.4e-14 83.6 154 38.3
ClCG01G021640 Citrullus lanatus HOM05D004496 ORTHO05D005513 4.1e-14 82.8 154 37.7
Nitab4.5_0005882g0010 Nicotiana tabacum HOM05D004496 ORTHO05D005513 5.3e-14 82.4 172 37.2
Aa31LG9G9910 Aethionema arabicum HOM05D004496 ORTHO05D005950 6.9e-14 82.0 120 46.7
CDE04G1983 Ceratophyllum demersum HOM05D004496 ORTHO05D005513 6.9e-14 82.0 164 35.4
Lj1P1236T60 Lonicera japonica HOM05D004496 ORTHO05D005513 6.9e-14 82.0 125 43.2
Nn1g01506 Nelumbo nucifera HOM05D004496 ORTHO05D005513 1.2e-13 81.3 188 36.2
Potri.006G270100 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.5e-13 80.9 148 41.2
Zm00001eb112850 Zea mays HOM05D004496 ORTHO05D005513 1.5e-13 80.9 138 45.7
Gohir.A05G173300 Gossypium hirsutum HOM05D004496 ORTHO05D005513 2.0e-13 80.5 169 36.1
THA.LOC104813445 Tarenaya hassleriana HOM05D004496 ORTHO05D005513 2.0e-13 80.5 155 40.0
Zm00001eb169380 Zea mays HOM05D004496 ORTHO05D005513 2.6e-13 80.1 136 44.9
CsaV3_6G048690 Cucumis sativus L. HOM05D004496 ORTHO05D005513 4.5e-13 79.3 165 36.4
Migut.H01591 Erythranthe guttata HOM05D004496 ORTHO05D005513 4.5e-13 79.3 151 39.1
Thhalv10028862m.g Eutrema salsugineum HOM05D004496 ORTHO05D005513 4.5e-13 79.3 205 35.6
Gorai.009G181700 Gossypium raimondii HOM05D004496 ORTHO05D005513 4.5e-13 79.3 170 35.9
HanXRQChr15g0470781 Helianthus annuus HOM05D004496 ORTHO05D005513 7.7e-13 78.6 144 38.9
Cpa.g.sc3209.1 Carica papaya HOM05D004496 ORTHO05D005513 1.0e-12 78.2 151 39.1
COL.COLO4_31834 Corchorus olitorius HOM05D004496 ORTHO05D005513 1.0e-12 78.2 140 39.3
Atru.chr10.2286 Acer truncatum HOM05D004496 ORTHO05D005513 1.7e-12 77.4 173 35.8
Cfa000158 Carpinus fangiana HOM05D004496 ORTHO05D005513 1.7e-12 77.4 149 36.9
Haze_06861 Corylus avellana HOM05D004496 ORTHO05D005513 1.7e-12 77.4 140 38.6
Aqoxy1G03511 Aquilegia oxysepala HOM05D004496 ORTHO05D005513 2.9e-12 76.6 164 36.6
Actinidia02342 Actinidia chinensis HOM05D004496 ORTHO05D005513 5.0e-12 75.9 147 38.8
Hma1.2p1_0298F.1_g117440 Hydrangea macrophylla HOM05D004496 ORTHO05D005513 5.0e-12 75.9 149 39.6
Actinidia26886 Actinidia chinensis HOM05D004496 ORTHO05D005513 6.5e-12 75.5 147 40.8
Gohir.D06G157600 Gossypium hirsutum HOM05D004496 ORTHO05D005513 6.5e-12 75.5 153 37.9
Gorai.010G184200 Gossypium raimondii HOM05D004496 ORTHO05D005513 6.5e-12 75.5 153 37.9
vmacro03662 Vaccinium macrocarpon HOM05D004496 ORTHO05D005513 8.5e-12 75.1 173 38.7
TAR627G0164 Trochodendron aralioides HOM05D004496 ORTHO05D005513 1.1e-11 74.7 159 39.0
TAR627G0966 Trochodendron aralioides HOM05D004496 ORTHO05D005513 1.1e-11 74.7 159 39.0
Os11g0497350 Oryza sativa ssp. japonica HOM05D004496 ORTHO05D005513 1.9e-11 73.9 166 38.0
BraA03t14400Z Brassica rapa HOM05D004496 ORTHO05D005513 2.5e-11 73.6 137 40.9
MD05G1352700 Malus domestica HOM05D004496 ORTHO05D005513 4.2e-11 72.8 175 37.1
Sabra11G0011700 Salix brachista HOM05D004496 ORTHO05D005513 4.2e-11 72.8 177 35.0
MBI19_g19808_MAGBIO Magnolia biondii HOM05D004496 ORTHO05D005513 7.2e-11 72.0 120 40.0
Psat4g004280 Pisum sativum HOM05D004496 ORTHO05D005513 9.4e-11 71.6 155 31.6
TAR626G0621 Trochodendron aralioides HOM05D004496 ORTHO05D005513 1.2e-10 71.2 142 39.4
Lsat_1_v5_gn_4_61701 Lactuca sativa HOM05D004496 ORTHO05D005513 2.7e-10 70.1 147 41.5
Lalb_Chr18g0056781 Lupinus albus HOM05D004496 ORTHO05D005513 3.6e-10 69.7 167 34.1
PSO832G0430 Papaver somniferum HOM05D004496 ORTHO05D005513 3.6e-10 69.7 129 39.5
Sed0016463 Sechium edule HOM05D004496 ORTHO05D005513 4.7e-10 69.3 144 36.1
TWI38G0680 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 7.9e-10 68.6 166 37.3
Potri.004G003900 Populus trichocarpa HOM05D004496 ORTHO05D005513 1.0e-09 68.2 172 34.9
MELO3C007420.2 Cucumis melo HOM05D004496 ORTHO05D005513 1.4e-09 67.8 165 34.5
PSO210G3984 Papaver somniferum HOM05D004496 ORTHO05D005513 1.4e-09 67.8 148 37.2
Gohir.A06G151400 Gossypium hirsutum HOM05D004496 ORTHO05D005513 3.9e-09 66.2 82 50.0
Prupe.4G014700 Prunus persica HOM05D004496 ORTHO05D005513 1.1e-08 64.7 165 35.2
Eucgr.D01366 Eucalyptus grandis HOM05D004496 ORTHO05D005513 1.5e-08 64.3 169 33.7
Sabra04G0002100 Salix brachista HOM05D004496 ORTHO05D005513 4.4e-08 62.8 149 36.9
PGR004G2243 Punica granatum HOM05D004496 ORTHO05D005513 9.7e-08 61.6 176 35.2
Oeu007154.1 Olea europaea HOM05D004496 ORTHO05D005513 1.7e-07 60.8 157 35.0
unitig_26.g9398 Utricularia gibba HOM05D004496 ORTHO05D005513 1.7e-07 60.8 174 35.1
Sp6g04650 Schrenkiella parvula HOM05D004496 ORTHO05D005513 2.2e-07 60.5 158 35.4
ATR0059G030 Amborella trichopoda HOM05D004496 ORTHO05D005513 2.8e-07 60.1 173 35.8
Nn2g15240 Nelumbo nucifera HOM05D004496 ORTHO05D005513 4.8e-07 59.3 145 37.2
Glyma.07G263700 Glycine max HOM05D004496 ORTHO05D005513 6.3e-07 58.9 173 31.2
AT4G22190 Arabidopsis thaliana HOM05D004496 ORTHO05D005513 1.4e-06 57.8 148 33.1
QL05p071740 Quercus lobata HOM05D004496 ORTHO05D005513 2.4e-06 57.0 98 36.7
unitig_749.g13622 Utricularia gibba HOM05D004496 ORTHO05D005513 3.1e-06 56.6 110 42.7
TWI63G1509 Tripterygium wilfordii HOM05D004496 ORTHO05D005513 4.1e-06 56.2 142 35.9
Manes.17G027100 Manihot esculenta HOM05D004496 ORTHO05D005513 7.0e-06 55.5 158 34.2


User provided reference genes

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