Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 1.8e-119 432.6 217 100.0
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 4.6e-14 82.4 154 35.1
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.0e-12 77.0 161 34.2
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 2.0e-12 77.0 161 34.2
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 2.6e-12 76.6 153 37.3
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 2.6e-12 76.6 168 34.5
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 4.4e-12 75.9 140 37.1
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 4.4e-12 75.9 144 37.5
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 4.4e-12 75.9 137 36.5
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 7.4e-12 75.1 148 37.2
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 9.7e-12 74.7 165 37.0
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 1.3e-11 74.3 164 34.1
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 1.3e-11 74.3 151 39.7
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 1.3e-11 74.3 163 35.6
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.7e-11 73.9 136 39.7
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 2.2e-11 73.6 147 34.0
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 2.8e-11 73.2 155 34.8
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 2.8e-11 73.2 150 36.0
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 4.8e-11 72.4 125 37.6
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 1.1e-10 71.2 158 36.7
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 1.1e-10 71.2 159 35.2
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 1.4e-10 70.9 158 36.1
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.4e-10 70.9 148 32.4
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 1.4e-10 70.9 134 34.3
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 1.4e-10 70.9 126 37.3
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.8e-10 70.5 175 33.7
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.8e-10 70.5 163 32.5
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 2.4e-10 70.1 166 36.1
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 4.1e-10 69.3 157 37.6
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 4.1e-10 69.3 130 33.8
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 4.1e-10 69.3 149 36.9
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 5.3e-10 68.9 129 40.3
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.3e-10 68.9 160 31.9
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 6.9e-10 68.6 159 35.8
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 9.1e-10 68.2 148 33.1
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 9.1e-10 68.2 183 32.2
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 1.2e-09 67.8 159 32.7
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 1.2e-09 67.8 166 34.3
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.5e-09 67.4 182 33.5
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 1.5e-09 67.4 176 33.5
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 1.5e-09 67.4 176 33.5
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 1.5e-09 67.4 178 33.1
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.5e-09 67.4 159 31.4
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 1.5e-09 67.4 163 35.0
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 2.0e-09 67.0 176 34.7
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.0e-09 67.0 159 31.4
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 2.0e-09 67.0 169 32.5
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 2.0e-09 67.0 182 33.5
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 2.6e-09 66.6 187 33.2
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 2.6e-09 66.6 133 36.1
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 4.5e-09 65.9 149 36.2
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 4.5e-09 65.9 167 29.3
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 5.9e-09 65.5 151 34.4
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 5.9e-09 65.5 147 38.1
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 5.9e-09 65.5 149 35.6
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 7.7e-09 65.1 139 33.1
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 7.7e-09 65.1 149 33.6
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 7.7e-09 65.1 149 36.2
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 7.7e-09 65.1 166 33.1
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 1.0e-08 64.7 151 37.1
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.0e-08 64.7 179 33.5
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 1.3e-08 64.3 131 36.6
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.3e-08 64.3 162 37.0
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 1.3e-08 64.3 137 35.8
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 1.7e-08 63.9 160 35.0
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.7e-08 63.9 173 31.2
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 2.2e-08 63.5 134 34.3
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 2.2e-08 63.5 135 35.6
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 2.2e-08 63.5 136 37.5
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 2.9e-08 63.2 190 31.6
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 2.9e-08 63.2 151 35.8
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 3.8e-08 62.8 147 34.7
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 3.8e-08 62.8 146 36.3
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 5.0e-08 62.4 163 35.0
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 5.0e-08 62.4 163 35.0
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 5.0e-08 62.4 126 38.1
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 5.0e-08 62.4 103 33.0
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 8.5e-08 61.6 124 35.5
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 8.5e-08 61.6 119 37.0
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 8.5e-08 61.6 164 32.3
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 8.5e-08 61.6 124 39.5
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.1e-07 61.2 177 33.3
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 1.1e-07 61.2 147 37.4
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 1.1e-07 61.2 148 31.8
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 1.4e-07 60.8 163 34.4
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.4e-07 60.8 148 31.8
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 1.9e-07 60.5 151 31.1
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 1.9e-07 60.5 165 35.8
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 2.5e-07 60.1 137 32.1
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 2.5e-07 60.1 121 35.5
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 2.5e-07 60.1 173 30.1
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 4.2e-07 59.3 151 32.5
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 4.2e-07 59.3 159 30.8
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 5.5e-07 58.9 179 33.0
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 9.4e-07 58.2 152 33.6
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 1.2e-06 57.8 140 34.3
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 1.2e-06 57.8 158 31.6
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 4.7e-06 55.8 188 30.9
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 4.7e-06 55.8 174 28.7
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 4.7e-06 55.8 167 29.9
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 7.9e-06 55.1 187 29.9
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 7.9e-06 55.1 127 30.7


User provided reference genes

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