Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 1.0e-54 216.5 108 100.0
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 4.3e-29 131.3 100 66.0
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 4.3e-29 131.3 102 64.7
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 7.4e-29 130.6 101 61.4
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 9.7e-29 130.2 101 61.4
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 1.3e-28 129.8 102 62.7
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 4.8e-28 127.9 101 63.4
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 1.1e-27 126.7 99 61.6
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.4e-27 126.3 101 61.4
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 1.4e-27 126.3 101 61.4
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.8e-27 125.9 102 62.7
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 3.1e-27 125.2 101 61.4
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 4.1e-27 124.8 101 61.4
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 5.3e-27 124.4 99 61.6
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 9.1e-27 123.6 100 62.0
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 1.2e-26 123.2 102 60.8
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 1.2e-26 123.2 100 58.0
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 1.5e-26 122.9 101 58.4
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 2.0e-26 122.5 99 56.6
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 2.0e-26 122.5 102 60.8
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 3.4e-26 121.7 102 59.8
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.0e-25 120.2 100 64.0
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 1.3e-25 119.8 99 58.6
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.9e-25 118.6 99 60.6
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 2.9e-25 118.6 102 56.9
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 3.8e-25 118.2 100 58.0
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.0e-25 117.9 102 57.8
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 8.5e-25 117.1 102 56.9
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 8.5e-25 117.1 102 56.9
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 8.5e-25 117.1 101 57.4
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 8.5e-25 117.1 102 56.9
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 1.1e-24 116.7 82 68.3
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 1.1e-24 116.7 102 57.8
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.1e-24 116.7 103 56.3
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.4e-24 116.3 100 59.0
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.4e-24 116.3 100 59.0
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.4e-24 116.3 102 54.9
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.4e-24 116.3 100 58.0
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 1.9e-24 115.9 102 54.9
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.9e-24 115.9 102 57.8
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 2.5e-24 115.5 102 56.9
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 2.5e-24 115.5 102 57.8
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 4.2e-24 114.8 103 56.3
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 4.2e-24 114.8 99 58.6
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 5.5e-24 114.4 101 55.4
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 7.2e-24 114.0 99 60.6
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 1.2e-23 113.2 84 66.7
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 1.6e-23 112.8 100 56.0
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 1.6e-23 112.8 111 59.5
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.6e-23 112.8 102 57.8
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 2.1e-23 112.5 100 59.0
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 2.7e-23 112.1 103 55.3
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 2.7e-23 112.1 103 51.5
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 3.6e-23 111.7 103 53.4
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 3.6e-23 111.7 103 53.4
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 3.6e-23 111.7 102 54.9
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 6.1e-23 110.9 100 54.0
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 6.1e-23 110.9 102 52.0
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 1.0e-22 110.2 100 57.0
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 1.0e-22 110.2 103 52.4
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 1.4e-22 109.8 100 58.0
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 1.8e-22 109.4 102 54.9
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 2.3e-22 109.0 102 55.9
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 2.3e-22 109.0 102 55.9
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 3.0e-22 108.6 99 57.6
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 3.0e-22 108.6 100 55.0
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 8.8e-22 107.1 102 52.9
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 8.8e-22 107.1 100 58.0
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 1.1e-21 106.7 100 57.0
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 2.0e-21 105.9 102 55.9
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 3.3e-21 105.1 99 52.5
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 3.3e-21 105.1 104 52.9
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 3.3e-21 105.1 100 54.0
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 3.3e-21 105.1 101 53.5
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 4.4e-21 104.8 66 78.8
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 5.7e-21 104.4 102 52.9
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 7.4e-21 104.0 69 76.8
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.3e-20 103.2 69 76.8
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 2.8e-20 102.1 101 50.5
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 3.7e-20 101.7 101 49.5
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 3.7e-20 101.7 103 50.5
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 1.4e-19 99.8 101 48.5
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 1.4e-19 99.8 101 48.5
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 2.4e-19 99.0 77 62.3
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 3.1e-19 98.6 100 54.0
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 3.1e-19 98.6 100 51.0
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 4.1e-19 98.2 101 49.5
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.3e-19 97.8 99 53.5
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 6.9e-19 97.4 101 48.5
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 6.9e-19 97.4 106 50.9
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 2.0e-18 95.9 101 47.5
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 2.0e-18 95.9 101 47.5
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.6e-18 95.5 101 47.5
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.6e-18 95.5 101 47.5
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 1.0e-17 93.6 72 62.5
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 6.5e-17 90.9 58 75.9
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 7.2e-16 87.4 111 45.0
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 1.2e-15 86.7 68 60.3
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.8e-14 82.8 100 50.0
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 4.4e-13 78.2 102 40.2
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 8.2e-12 73.9 105 39.0
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 2.4e-11 72.4 92 41.3
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 5.9e-10 67.8 65 50.8
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 8.0e-07 57.4 63 42.9


User provided reference genes

Program Settings