Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007768 Vanilla planifolia HOM05D006534 ORTHO05D006434 5.0e-19 97.8 101 100.0
HPP92_007868 Vanilla planifolia HOM05D006534 ORTHO05D006434 5.0e-19 97.8 101 100.0
TPR.G21131 Trifolium pratense HOM05D006534 ORTHO05D006434 5.0e-11 71.2 101 61.4
Atru.chr5.2330 Acer truncatum HOM05D006534 ORTHO05D006434 7.2e-10 67.4 101 79.2
Phvul.007G046300 Phaseolus vulgaris HOM05D006534 ORTHO05D006434 9.4e-10 67.0 101 77.2
HPP92_006071 Vanilla planifolia HOM05D006534 ORTHO05D006434 9.4e-10 67.0 101 69.3
Potri.009G086900 Populus trichocarpa HOM05D006534 ORTHO05D006434 1.6e-09 66.2 101 75.2
Sc08g0004430 Simmondsia chinensis HOM05D006534 ORTHO05D006434 2.7e-09 65.5 101 64.4
Glyma.11G002000 Glycine max HOM05D006534 ORTHO05D006434 8.0e-09 63.9 105 76.2
Gorai.008G020000 Gossypium raimondii HOM05D006534 ORTHO05D006434 8.0e-09 63.9 101 79.2
Ca_02937_v3 Cicer arietinum L. HOM05D006534 ORTHO05D006434 1.0e-08 63.5 101 63.4
Thecc.02G118300 Theobroma cacao HOM05D006534 ORTHO05D006434 1.0e-08 63.5 101 70.3
Ah.01g007070 Amaranthus hybridus HOM05D006534 ORTHO05D006434 2.3e-08 62.4 104 66.3
CsaV3_4G000160 Cucumis sativus L. HOM05D006534 ORTHO05D006434 5.2e-08 61.2 101 70.3
TWI14G1419 Tripterygium wilfordii HOM05D006534 ORTHO05D006434 5.2e-08 61.2 101 68.3
ClCG10G010140 Citrullus lanatus HOM05D006534 ORTHO05D006434 6.7e-08 60.8 101 72.3
CDE04G3098 Ceratophyllum demersum HOM05D006534 ORTHO05D006434 2.0e-07 59.3 101 71.3
CDE06G1753 Ceratophyllum demersum HOM05D006534 ORTHO05D006434 2.0e-07 59.3 101 81.2
PGR042G3724 Punica granatum HOM05D006534 ORTHO05D006434 2.6e-07 58.9 104 71.2
Lj5g0022695 Lotus japonicus HOM05D006534 ORTHO05D006434 3.3e-07 58.5 108 56.5
Sed0015576 Sechium edule HOM05D006534 ORTHO05D006434 4.4e-07 58.2 101 72.3
Duzib248G1096 Durio zibethinus HOM05D006534 ORTHO05D006434 5.7e-07 57.8 101 71.3
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 9.7e-07 57.0 94 81.9
Oeu013796.1 Olea europaea HOM05D006534 ORTHO05D006434 9.7e-07 57.0 101 71.3
arahy.Tifrunner.gnm1.ann1.HPS7HM Arachis hypogaea HOM05D006534 ORTHO05D006434 1.3e-06 56.6 101 75.2
HanXRQChr16g0509341 Helianthus annuus HOM05D006534 ORTHO05D006434 1.3e-06 56.6 101 73.3
Solyc09g098300.3 Solanum lycopersicum HOM05D006534 ORTHO05D006434 1.7e-06 56.2 101 70.3
Dinv42239 Davidia involucrata HOM05D006534 ORTHO05D006434 2.8e-06 55.5 101 67.3
CANSAT25G2579 Cannabis sativa HOM05D006534 ORTHO05D006434 3.7e-06 55.1 101 73.3
CANSAT25G3637 Cannabis sativa HOM05D006534 ORTHO05D006434 3.7e-06 55.1 101 73.3
CiPaw.05G018800 Carya illinoinensis HOM05D006534 ORTHO05D006434 6.3e-06 54.3 101 66.3
Ciclev10026875m.g Citrus clementina HOM05D006534 ORTHO05D006434 8.2e-06 53.9 101 53.5
Glyma.01G242200 Glycine max HOM05D006534 ORTHO05D006434 8.2e-06 53.9 107 72.9


User provided reference genes

Program Settings