Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 0.0e+00 1204.9 638 100.0
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 9.4e-156 554.7 292 97.9
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 2.6e-137 493.4 656 49.8
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 2.2e-136 490.3 666 49.4
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 1.2e-131 474.6 654 50.0
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 2.4e-127 460.3 647 47.6
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 1.3e-125 454.5 656 47.0
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 1.7e-125 454.1 660 48.5
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 4.3e-124 449.5 675 45.6
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 4.3e-124 449.5 667 46.9
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 2.1e-123 447.2 654 46.3
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 3.6e-123 446.4 666 48.3
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 1.4e-122 444.5 497 54.9
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 2.3e-122 443.7 502 54.2
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 2.3e-122 443.7 666 46.7
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 4.0e-122 443.0 674 46.9
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 4.0e-122 443.0 673 45.5
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 8.9e-122 441.8 660 47.7
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 8.9e-122 441.8 641 45.9
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 7.5e-121 438.7 658 46.5
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 9.2e-119 431.8 672 46.4
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 3.5e-118 429.9 663 45.9
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 1.3e-117 427.9 658 45.6
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 2.3e-117 427.2 678 45.1
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 2.5e-116 423.7 710 44.4
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 2.8e-115 420.2 664 46.2
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 1.8e-114 417.5 700 43.7
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 3.1e-114 416.8 717 43.1
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 4.0e-114 416.4 661 45.4
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 5.2e-114 416.0 538 50.6
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 5.2e-114 416.0 678 45.1
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 8.9e-114 415.2 622 47.1
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 8.9e-114 415.2 664 45.9
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 1.5e-113 414.5 694 43.7
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 2.6e-113 413.7 641 46.2
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 9.8e-113 411.8 472 54.4
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 1.7e-112 411.0 715 42.5
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 2.9e-112 410.2 664 45.8
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 3.7e-112 409.8 657 44.1
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 1.4e-111 407.9 687 44.1
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 2.4e-111 407.1 655 45.3
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 1.2e-110 404.8 662 44.6
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 2.7e-110 403.7 653 45.3
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 2.7e-110 403.7 538 49.6
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 6.0e-110 402.5 561 46.9
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 7.8e-110 402.1 680 43.1
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 1.3e-109 401.4 685 43.1
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.1e-108 398.3 676 44.8
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 1.9e-108 397.5 536 48.7
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 2.5e-108 397.1 658 43.9
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 1.2e-107 394.8 625 44.5
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 1.6e-107 394.4 531 49.0
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 3.6e-107 393.3 656 44.5
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 4.7e-107 392.9 492 52.8
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 1.4e-106 391.3 750 40.4
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 2.3e-106 390.6 648 44.1
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 2.3e-106 390.6 656 43.0
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 5.2e-106 389.4 750 40.1
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 6.8e-106 389.0 641 44.3
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 1.2e-105 388.3 389 58.9
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 1.5e-105 387.9 495 50.3
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 2.6e-105 387.1 536 47.2
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 2.6e-105 387.1 523 48.4
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 3.4e-105 386.7 695 42.7
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 4.4e-105 386.3 490 51.2
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 1.4e-103 381.3 524 49.0
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 1.4e-103 381.3 553 46.5
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 2.4e-103 380.6 526 48.1
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 5.4e-103 379.4 482 50.6
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 9.2e-103 378.6 473 50.5
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 1.6e-102 377.9 516 49.6
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 6.0e-102 375.9 482 49.2
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 7.8e-102 375.6 608 43.6
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 1.0e-101 375.2 538 47.0
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 1.7e-101 374.4 608 43.4
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 1.1e-100 371.7 494 49.6
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 7.3e-100 369.0 655 43.2
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 1.2e-99 368.2 532 46.6
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 2.8e-99 367.1 704 39.6
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 2.8e-99 367.1 529 46.5
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 1.1e-98 365.2 498 49.8
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 1.8e-98 364.4 615 45.0
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 6.8e-98 362.5 511 47.2
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 8.9e-98 362.1 643 41.2
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 3.4e-97 360.1 515 45.0
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 2.9e-96 357.1 459 48.8
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 2.4e-95 354.0 616 42.0
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 3.2e-95 353.6 479 48.4
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 2.7e-94 350.5 618 42.1
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 2.7e-94 350.5 618 42.1
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 3.3e-92 343.6 486 47.5
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 1.4e-90 338.2 396 54.0
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 1.2e-86 325.1 661 39.9
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 1.9e-84 317.8 375 52.5
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 4.0e-82 310.1 166 99.4
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 6.9e-82 309.3 614 38.3
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 2.2e-80 304.3 490 44.7
MBI19_g00631_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 2.9e-80 303.9 276 60.9
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 3.0e-77 293.9 246 64.6
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 1.1e-71 275.4 623 36.8
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 2.9e-64 250.8 466 41.4
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 1.6e-62 245.0 435 42.1
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 6.1e-62 243.0 433 42.0
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 3.0e-61 240.7 400 42.0
MD09G1066300 Malus domestica HOM05D006007 ORTHO05D007518 1.8e-58 231.5 251 55.8
Sc10g0004660 Simmondsia chinensis HOM05D006007 ORTHO05D007518 1.5e-57 228.4 246 54.5
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 7.4e-52 209.5 415 41.7
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 3.7e-51 207.2 365 38.6
CDE05G1269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 5.3e-50 203.4 236 49.6
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 1.5e-39 168.7 413 37.0
Hma1.2p1_0481F.1_g162130 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 1.9e-39 168.3 170 57.1
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 8.0e-38 162.9 420 34.5
Os03g0213900 Oryza sativa ssp. japonica HOM05D006007 ORTHO05D007518 1.8e-37 161.8 224 46.0
SEGI_00365 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 7.0e-34 149.8 129 60.5
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 1.9e-31 141.7 239 42.7
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 1.2e-30 139.0 139 51.8
BraA09t36042Z Brassica rapa HOM05D006007 ORTHO05D007518 4.7e-30 137.1 96 74.0
A09p04060 Brassica napus HOM05D006007 ORTHO05D010543 9.7e-28 129.4 96 71.9
SHI25684 Sapria himalayana HOM05D006007 ORTHO05D007518 2.0e-25 121.7 174 49.4
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 2.9e-24 117.9 290 35.5
Cre09.g389900 Chlamydomonas reinhardtii HOM05D006007 ORTHO05D007518 1.2e-17 95.9 357 26.6
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 1.5e-15 89.0 174 40.8
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 5.7e-12 77.0 70 62.9
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 1.7e-11 75.5 250 32.8
CARHR153030 Cardamine hirsuta HOM05D006007 ORTHO05D007518 4.5e-09 67.4 72 51.4
CDE10G0325 Ceratophyllum demersum HOM05D000032 ORTHO05D005217 8.0e-06 56.6 134 31.3


User provided reference genes

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