Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007751 Vanilla planifolia HOM05D000063 ORTHO05D427960 1.6e-68 262.7 139 100.0
HPP92_007859 Vanilla planifolia HOM05D000063 ORTHO05D003313 7.6e-26 120.9 139 63.3
HPP92_023687 Vanilla planifolia HOM05D000063 ORTHO05D003313 3.0e-14 82.4 142 47.9
Os07g0589200 Oryza sativa ssp. japonica HOM05D000063 ORTHO05D003313 1.4e-11 73.6 152 39.5
Sopen02g037140 Solanum pennellii HOM05D000063 ORTHO05D003313 1.8e-11 73.2 146 43.2
PGSC0003DMG400024937 Solanum tuberosum HOM05D000063 ORTHO05D003313 2.4e-11 72.8 142 43.0
Solyc02g092570.1 Solanum lycopersicum HOM05D000063 ORTHO05D003313 3.1e-11 72.4 146 43.2
Peaxi162Scf00264g00014 Petunia axillaris HOM05D000063 ORTHO05D003313 9.0e-11 70.9 148 42.6
Aqoxy6G02705 Aquilegia oxysepala HOM05D000063 ORTHO05D003313 1.5e-10 70.1 164 37.8
CAN.G1075.20 Capsicum annuum HOM05D000063 ORTHO05D003313 2.0e-10 69.7 155 40.6
Zm00001eb326210 Zea mays HOM05D000063 ORTHO05D003313 2.0e-10 69.7 146 37.0
HPP92_026570 Vanilla planifolia HOM05D000063 ORTHO05D003313 2.6e-10 69.3 142 43.7
ECA246G4695 Erigeron canadensis HOM05D000063 ORTHO05D003313 3.4e-10 68.9 158 38.6
SalBow6G4392 Salvia bowleyana HOM05D000063 ORTHO05D003313 4.4e-10 68.6 141 40.4
Sc16g0000100 Simmondsia chinensis HOM05D000063 ORTHO05D003313 4.4e-10 68.6 140 41.4
Cfa004108 Carpinus fangiana HOM05D000063 ORTHO05D003313 5.8e-10 68.2 147 44.2
Hma1.2p1_0942F.1_g239770 Hydrangea macrophylla HOM05D000063 ORTHO05D003313 5.8e-10 68.2 146 41.1
Hma1.2p1_0942F.1_g239775 Hydrangea macrophylla HOM05D000063 ORTHO05D003313 5.8e-10 68.2 146 41.1
Psat0s3215g0040 Pisum sativum HOM05D000063 ORTHO05D003313 7.6e-10 67.8 161 39.8
Nn1g04603 Nelumbo nucifera HOM05D000063 ORTHO05D003313 9.9e-10 67.4 159 38.4
Zm00001eb108250 Zea mays HOM05D000063 ORTHO05D003313 9.9e-10 67.4 146 38.4
Cc07_g06890 Coffea canephora HOM05D000063 ORTHO05D003313 1.3e-09 67.0 147 38.8
Lj7C90T9 Lonicera japonica HOM05D000063 ORTHO05D003313 1.3e-09 67.0 139 39.6
MSTRG.2826 Avicennia marina HOM05D000063 ORTHO05D003313 2.2e-09 66.2 152 42.1
TAR628G0809 Trochodendron aralioides HOM05D000063 ORTHO05D003313 2.2e-09 66.2 161 37.9
Nitab4.5_0000651g0080 Nicotiana tabacum HOM05D000063 ORTHO05D003313 2.9e-09 65.9 159 39.0
Psat2g170760 Pisum sativum HOM05D000063 ORTHO05D003313 2.9e-09 65.9 151 39.1
Haze_15303 Corylus avellana HOM05D000063 ORTHO05D003313 3.8e-09 65.5 148 42.6
TAR376G0803 Trochodendron aralioides HOM05D000063 ORTHO05D003313 3.8e-09 65.5 162 37.7
CSS0004321 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D003313 6.4e-09 64.7 155 37.4
COL.COLO4_11548 Corchorus olitorius HOM05D000063 ORTHO05D003313 6.4e-09 64.7 159 37.1
Potri.007G053500 Populus trichocarpa HOM05D000063 ORTHO05D003313 1.1e-08 63.9 158 40.5
Migut.H00362 Erythranthe guttata HOM05D000063 ORTHO05D003313 1.4e-08 63.5 154 40.3
SGA_v2.0_scaffold15G07425 Striga asiatica HOM05D000063 ORTHO05D003313 1.4e-08 63.5 146 39.7
Gohir.D11G206700 Gossypium hirsutum HOM05D000063 ORTHO05D003313 1.9e-08 63.2 160 36.2
Lalb_Chr05g0226001 Lupinus albus HOM05D000063 ORTHO05D003313 1.9e-08 63.2 161 36.0
Rhsim10G0101600 Rhododendron simsii HOM05D000063 ORTHO05D003313 1.9e-08 63.2 154 38.3
Dinv30074 Davidia involucrata HOM05D000063 ORTHO05D003313 2.4e-08 62.8 143 39.9
Duzib147G0875 Durio zibethinus HOM05D000063 ORTHO05D003313 2.4e-08 62.8 157 36.9
Duzib264G0952 Durio zibethinus HOM05D000063 ORTHO05D003313 2.4e-08 62.8 157 37.6
Gohir.A11G216600 Gossypium hirsutum HOM05D000063 ORTHO05D003313 2.4e-08 62.8 157 35.7
Gorai.007G221900 Gossypium raimondii HOM05D000063 ORTHO05D003313 2.4e-08 62.8 157 35.7
Nitab4.5_0003296g0030 Nicotiana tabacum HOM05D000063 ORTHO05D003313 2.4e-08 62.8 159 38.4
Thecc.01G069600 Theobroma cacao HOM05D000063 ORTHO05D003313 2.4e-08 62.8 158 38.0
HanXRQChr12g0376951 Helianthus annuus HOM05D000063 ORTHO05D003313 3.2e-08 62.4 148 39.2
Atru.chr3.189 Acer truncatum HOM05D000063 ORTHO05D003313 5.4e-08 61.6 153 35.3
Sed0008727 Sechium edule HOM05D000063 ORTHO05D003313 5.4e-08 61.6 145 39.3
unitig_736.g22604 Utricularia gibba HOM05D000063 ORTHO05D003313 5.4e-08 61.6 138 37.0
Atru.chr3.160 Acer truncatum HOM05D000063 ORTHO05D003313 7.1e-08 61.2 153 35.3
ClCG01G017410 Citrullus lanatus HOM05D000063 ORTHO05D003313 7.1e-08 61.2 152 39.5
Lj4g0016092 Lotus japonicus HOM05D000063 ORTHO05D003313 7.1e-08 61.2 157 36.3
Potri.005G145600 Populus trichocarpa HOM05D000063 ORTHO05D003313 7.1e-08 61.2 159 37.7
MELO3C007619.2 Cucumis melo HOM05D000063 ORTHO05D003313 9.3e-08 60.8 154 39.6
Dinv26911 Davidia involucrata HOM05D000063 ORTHO05D003313 9.3e-08 60.8 151 38.4
Lsat_1_v5_gn_3_87941 Lactuca sativa HOM05D000063 ORTHO05D003313 9.3e-08 60.8 157 36.9
PSO541G6161 Papaver somniferum HOM05D000063 ORTHO05D003313 9.3e-08 60.8 160 35.6
PSO675G9250 Papaver somniferum HOM05D000063 ORTHO05D003313 9.3e-08 60.8 160 35.6
CDE01G0386 Ceratophyllum demersum HOM05D000063 ORTHO05D003313 1.2e-07 60.5 145 37.2
DCAR_010829 Daucus carota HOM05D000063 ORTHO05D003313 1.2e-07 60.5 153 38.6
Sabra07G0046800 Salix brachista HOM05D000063 ORTHO05D003313 1.2e-07 60.5 157 41.4
AL8G43900 Arabidopsis lyrata HOM05D000063 ORTHO05D003313 1.6e-07 60.1 147 34.7
AT5G67411 Arabidopsis thaliana HOM05D000063 ORTHO05D003313 1.6e-07 60.1 147 36.7
CARHR280180 Cardamine hirsuta HOM05D000063 ORTHO05D003313 2.1e-07 59.7 149 34.9
Manes.13G113100 Manihot esculenta HOM05D000063 ORTHO05D003313 2.1e-07 59.7 161 37.3
AT3G49950 Arabidopsis thaliana HOM05D000063 ORTHO05D003313 3.5e-07 58.9 140 37.9
Oeu031173.1 Olea europaea HOM05D000063 ORTHO05D003313 3.5e-07 58.9 156 34.6
Prupe.6G223200 Prunus persica HOM05D000063 ORTHO05D003313 3.5e-07 58.9 172 33.7
Carub.0005s1631 Capsella rubella HOM05D000063 ORTHO05D003313 4.6e-07 58.5 139 36.0
CARHR159030 Cardamine hirsuta HOM05D000063 ORTHO05D003313 4.6e-07 58.5 140 35.7
RcHm_v2.0_Chr2g0107531 Rosa chinensis HOM05D000063 ORTHO05D003313 4.6e-07 58.5 156 35.3
Glyma.05G103400 Glycine max HOM05D000063 ORTHO05D003313 6.0e-07 58.2 175 32.6
Sp5g12160 Schrenkiella parvula HOM05D000063 ORTHO05D003313 6.0e-07 58.2 140 36.4
FvH4_1g17370 Fragaria vesca HOM05D000063 ORTHO05D003313 7.9e-07 57.8 156 35.3
FAN19G1844 Fragaria x ananassa HOM05D000063 ORTHO05D003313 7.9e-07 57.8 156 35.3
MD15G1294600 Malus domestica HOM05D000063 ORTHO05D003313 7.9e-07 57.8 163 33.1
Manes.12G110800 Manihot esculenta HOM05D000063 ORTHO05D003313 7.9e-07 57.8 156 37.2
Medtr4g095500 Medicago truncatula HOM05D000063 ORTHO05D003313 7.9e-07 57.8 162 36.4
Ciclev10025567m.g Citrus clementina HOM05D000063 ORTHO05D003313 1.0e-06 57.4 160 37.5
TPR.G23859 Trifolium pratense HOM05D000063 ORTHO05D003313 1.0e-06 57.4 161 36.6
AL5G29980 Arabidopsis lyrata HOM05D000063 ORTHO05D003313 1.3e-06 57.0 140 37.1
Thhalv10010981m.g Eutrema salsugineum HOM05D000063 ORTHO05D003313 1.3e-06 57.0 138 35.5
FAN23G0063 Fragaria x ananassa HOM05D000063 ORTHO05D003313 1.3e-06 57.0 156 35.3
MD00G1112400 Malus domestica HOM05D000063 ORTHO05D003313 1.3e-06 57.0 169 33.7
Oeu013287.1 Olea europaea HOM05D000063 ORTHO05D003313 1.3e-06 57.0 159 34.6
FAN26G0442 Fragaria x ananassa HOM05D000063 ORTHO05D003313 2.3e-06 56.2 156 35.9
Psat6g054280 Pisum sativum HOM05D000063 ORTHO05D003313 2.3e-06 56.2 139 39.6
CsaV3_6G043940 Cucumis sativus L. HOM05D000063 ORTHO05D003313 3.0e-06 55.8 156 37.2
DCAR_025784 Daucus carota HOM05D000063 ORTHO05D003313 3.0e-06 55.8 152 37.5
TWI09G0696 Tripterygium wilfordii HOM05D000063 ORTHO05D003313 3.0e-06 55.8 143 39.2
Thhalv10005469m.g Eutrema salsugineum HOM05D000063 ORTHO05D003313 5.1e-06 55.1 151 35.8
FAN28G1200 Fragaria x ananassa HOM05D000063 ORTHO05D003313 5.1e-06 55.1 156 35.3
Gohir.D11G051800 Gossypium hirsutum HOM05D000063 ORTHO05D003313 5.1e-06 55.1 157 35.7
Gorai.007G056200 Gossypium raimondii HOM05D000063 ORTHO05D003313 5.1e-06 55.1 157 35.7
THA.LOC104819255 Tarenaya hassleriana HOM05D000063 ORTHO05D003313 5.1e-06 55.1 144 34.7
TPR.G20950 Trifolium pratense HOM05D000063 ORTHO05D003313 5.1e-06 55.1 158 32.9
Carub.0008s2706 Capsella rubella HOM05D000063 ORTHO05D003313 6.6e-06 54.7 141 35.5


User provided reference genes

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