Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 1.3e-67 259.6 129 100.0
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 2.0e-17 92.8 131 42.0
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 2.0e-17 92.8 135 43.0
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 2.0e-17 92.8 126 45.2
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 1.7e-16 89.7 130 46.2
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 3.9e-16 88.6 121 39.7
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 5.0e-16 88.2 123 45.5
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 8.6e-16 87.4 126 39.7
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 8.6e-16 87.4 130 41.5
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 8.6e-16 87.4 133 39.8
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 1.1e-15 87.0 128 42.2
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 1.1e-15 87.0 126 41.3
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 1.5e-15 86.7 124 42.7
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 2.5e-15 85.9 125 43.2
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 3.3e-15 85.5 121 38.8
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 3.3e-15 85.5 121 42.1
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 4.3e-15 85.1 127 43.3
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 5.6e-15 84.7 127 41.7
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 7.3e-15 84.3 121 38.8
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 9.5e-15 84.0 126 42.9
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 9.5e-15 84.0 133 41.4
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 9.5e-15 84.0 125 40.8
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 1.2e-14 83.6 127 40.2
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 1.6e-14 83.2 126 38.9
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 2.1e-14 82.8 124 40.3
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 2.1e-14 82.8 124 43.5
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 2.8e-14 82.4 125 40.8
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.8e-14 82.4 125 40.8
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 2.8e-14 82.4 139 37.4
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 2.8e-14 82.4 127 40.9
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 2.8e-14 82.4 127 41.7
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 2.8e-14 82.4 127 40.9
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 3.6e-14 82.0 128 39.8
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 4.7e-14 81.6 128 39.1
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 4.7e-14 81.6 125 43.2
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 4.7e-14 81.6 125 42.4
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 6.2e-14 81.3 124 41.9
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 8.0e-14 80.9 127 40.9
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 8.0e-14 80.9 120 37.5
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 1.4e-13 80.1 128 43.8
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.4e-13 80.1 132 37.9
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.8e-13 79.7 129 40.3
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 1.8e-13 79.7 126 43.7
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 1.8e-13 79.7 124 38.7
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 1.8e-13 79.7 120 40.0
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 3.1e-13 79.0 128 40.6
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 3.1e-13 79.0 131 35.1
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 3.1e-13 79.0 126 41.3
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 3.1e-13 79.0 121 38.0
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 4.0e-13 78.6 125 44.0
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 4.0e-13 78.6 123 39.0
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 4.0e-13 78.6 126 42.9
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 5.2e-13 78.2 124 40.3
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 5.2e-13 78.2 124 41.1
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 5.2e-13 78.2 124 41.1
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 8.9e-13 77.4 123 39.0
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 8.9e-13 77.4 120 39.2
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 1.2e-12 77.0 128 41.4
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 1.2e-12 77.0 129 40.3
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 1.2e-12 77.0 130 40.0
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 1.5e-12 76.6 128 41.4
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 1.5e-12 76.6 66 50.0
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 1.5e-12 76.6 130 40.0
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 2.6e-12 75.9 126 38.1
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 2.6e-12 75.9 129 42.6
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 3.4e-12 75.5 122 41.0
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 4.4e-12 75.1 130 37.7
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 5.8e-12 74.7 124 37.9
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 5.8e-12 74.7 129 38.0
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 5.8e-12 74.7 131 39.7
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 9.8e-12 73.9 140 37.9
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 9.8e-12 73.9 121 34.7
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 1.3e-11 73.6 145 34.5
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 1.3e-11 73.6 122 41.8
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 2.9e-11 72.4 149 36.9
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 2.9e-11 72.4 130 38.5
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 2.9e-11 72.4 125 40.0
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 3.7e-11 72.0 124 35.5
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 8.3e-11 70.9 130 36.9
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 8.3e-11 70.9 130 37.7
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 1.1e-10 70.5 131 38.2
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 1.4e-10 70.1 132 34.8
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 4.1e-10 68.6 130 40.0
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 4.1e-10 68.6 131 37.4
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 4.1e-10 68.6 131 37.4
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 4.1e-10 68.6 132 37.1
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 4.1e-10 68.6 136 35.3
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 4.1e-10 68.6 124 40.3
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 4.1e-10 68.6 124 39.5
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 4.1e-10 68.6 121 37.2
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 5.4e-10 68.2 135 35.6
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 7.0e-10 67.8 130 36.9
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 7.0e-10 67.8 54 53.7
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 1.2e-09 67.0 121 41.3
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 1.6e-09 66.6 125 38.4
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 2.0e-09 66.2 128 36.7
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 2.0e-09 66.2 54 51.9
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 2.7e-09 65.9 156 33.3
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 4.6e-09 65.1 48 62.5
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 4.6e-09 65.1 131 36.6
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 7.8e-09 64.3 145 32.4
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 1.7e-08 63.2 130 35.4
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 1.7e-08 63.2 130 35.4
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 1.7e-08 63.2 134 36.6
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 1.7e-08 63.2 126 35.7
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 1.7e-08 63.2 135 35.6
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 3.0e-08 62.4 113 35.4
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 1.1e-07 60.5 135 34.1


User provided reference genes

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