Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007645 Vanilla planifolia HOM05D000259 ORTHO05D432679 2.1e-52 208.8 107 100.0
Zm00001eb357370 Zea mays HOM05D000259 ORTHO05D000155 2.5e-08 62.4 37 75.7
Nn5g27373 Nelumbo nucifera HOM05D000259 ORTHO05D000155 7.9e-07 57.4 37 70.3
PGR083G2509 Punica granatum HOM05D000259 ORTHO05D000155 1.0e-06 57.0 37 67.6
Oeu048739.3 Olea europaea HOM05D000259 ORTHO05D000155 1.3e-06 56.6 37 67.6
Os01g0587300 Oryza sativa ssp. japonica HOM05D000259 ORTHO05D000155 1.3e-06 56.6 37 67.6
Cpa.g.sc17.210 Carica papaya HOM05D000259 ORTHO05D000155 1.8e-06 56.2 37 67.6
FvH4_5g15460 Fragaria vesca HOM05D000259 ORTHO05D000155 3.0e-06 55.5 37 67.6
FAN04G1048 Fragaria x ananassa HOM05D000259 ORTHO05D000155 3.0e-06 55.5 37 67.6
FAN18G3670 Fragaria x ananassa HOM05D000259 ORTHO05D000155 3.0e-06 55.5 37 67.6
Peaxi162Scf00009g00318 Petunia axillaris HOM05D000259 ORTHO05D000155 3.0e-06 55.5 37 64.9
RcHm_v2.0_Chr7g0180621 Rosa chinensis HOM05D000259 ORTHO05D000155 3.0e-06 55.5 37 67.6
SGA_v2.0_scaffold56G20051 Striga asiatica HOM05D000259 ORTHO05D000155 3.0e-06 55.5 37 67.6
Dinv19918 Davidia involucrata HOM05D000259 ORTHO05D000155 3.9e-06 55.1 37 64.9
Manes.06G095700 Manihot esculenta HOM05D000259 ORTHO05D000155 3.9e-06 55.1 37 67.6
Potri.006G098700 Populus trichocarpa HOM05D000259 ORTHO05D000155 3.9e-06 55.1 37 64.9
CAN.G1711.6 Capsicum annuum HOM05D000259 ORTHO05D000155 5.1e-06 54.7 37 64.9
MD06G1188400 Malus domestica HOM05D000259 ORTHO05D000155 5.1e-06 54.7 37 67.6
Nitab4.5_0000785g0200 Nicotiana tabacum HOM05D000259 ORTHO05D000155 5.1e-06 54.7 37 64.9
Solyc03g113190.1 Solanum lycopersicum HOM05D000259 ORTHO05D000155 5.1e-06 54.7 37 64.9
Sopen03g032250 Solanum pennellii HOM05D000259 ORTHO05D000155 5.1e-06 54.7 37 64.9
PGSC0003DMG400025348 Solanum tuberosum HOM05D000259 ORTHO05D000155 5.1e-06 54.7 37 64.9
Atru.chr9.2313 Acer truncatum HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
Ah.11g048750 Amaranthus hybridus HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
CANSAT80G0423 Cannabis sativa HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
Cfa018987 Carpinus fangiana HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
AUR62008361 Chenopodium quinoa HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
AUR62021736 Chenopodium quinoa HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
Ciclev10018651m.g Citrus clementina HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
Haze_07376 Corylus avellana HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
Eucgr.B00432 Eucalyptus grandis HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
Glyma.05G029600 Glycine max HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
HanXRQChr16g0503211 Helianthus annuus HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
Rhsim12G0159400 Rhododendron simsii HOM05D000259 ORTHO05D000155 6.7e-06 54.3 37 64.9
arahy.Tifrunner.gnm1.ann1.IW49PZ Arachis hypogaea HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
arahy.Tifrunner.gnm1.ann1.Y0BV4U Arachis hypogaea HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
CSS0010450 Camellia sinensis var. sinensis HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
Duzib068G0138 Durio zibethinus HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
ECA232G2750 Erigeron canadensis HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
FAN13G0256 Fragaria x ananassa HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
Gohir.A07G064700 Gossypium hirsutum HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
Gorai.001G073200 Gossypium raimondii HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
Lj4g0009198 Lotus japonicus HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
Phvul.003G192500 Phaseolus vulgaris HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
Potri.016G113800 Populus trichocarpa HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 62.2
Prupe.5G186600 Prunus persica HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
Sabra06G0075800 Salix brachista HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 62.2
Sabra16G0109200 Salix brachista HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 62.2
Thecc.03G079500 Theobroma cacao HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
VMungo1215G2490 Vigna mungo HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9
GSVIVG01008058001 Vitis vinifera HOM05D000259 ORTHO05D000155 8.7e-06 53.9 37 64.9


User provided reference genes

Program Settings