Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007610 Vanilla planifolia HOM05D007128 ORTHO05D009059 8.1e-151 538.5 738 100.0
Os04g0488500 Oryza sativa ssp. japonica HOM05D007128 ORTHO05D009059 9.2e-54 216.1 741 71.0
TAR633G0543 Trochodendron aralioides HOM05D007128 ORTHO05D009059 7.8e-53 213.0 729 78.2
Nn5g27627 Nelumbo nucifera HOM05D007128 ORTHO05D009059 4.3e-51 207.2 735 76.6
MBI11_g35037_MAGBIO Magnolia biondii HOM05D007128 ORTHO05D009059 1.8e-49 201.8 740 77.4
Zm00001eb078990 Zea mays HOM05D007128 ORTHO05D009059 5.2e-49 200.3 739 70.2
Sabra07G0100100 Salix brachista HOM05D007128 ORTHO05D009059 2.4e-46 191.4 735 73.7
RcHm_v2.0_Chr4g0408411 Rosa chinensis HOM05D007128 ORTHO05D009059 3.2e-46 191.0 729 76.0
PSO566G0116 Papaver somniferum HOM05D007128 ORTHO05D009059 7.0e-46 189.9 729 72.4
Aqoxy2G03122 Aquilegia oxysepala HOM05D007128 ORTHO05D009059 9.2e-46 189.5 730 74.1
Potri.007G123600 Populus trichocarpa HOM05D007128 ORTHO05D009059 1.3e-44 185.7 735 76.6
Atru.chr3.1624 Acer truncatum HOM05D007128 ORTHO05D009059 6.6e-44 183.3 736 75.1
Ciclev10018682m.g Citrus clementina HOM05D007128 ORTHO05D009059 1.1e-43 182.6 733 76.1
CiPaw.01G104100 Carya illinoinensis HOM05D007128 ORTHO05D009059 1.9e-43 181.8 733 75.3
GSVIVG01013571001 Vitis vinifera HOM05D007128 ORTHO05D009059 1.9e-43 181.8 725 71.7
FAN07G2448 Fragaria x ananassa HOM05D007128 ORTHO05D009059 2.8e-42 177.9 735 72.7
Lj6C70T2 Lonicera japonica HOM05D007128 ORTHO05D009059 2.8e-42 177.9 723 62.4
PSO782G4906 Papaver somniferum HOM05D007128 ORTHO05D009059 6.2e-42 176.8 729 73.8
PGR083G1825 Punica granatum HOM05D007128 ORTHO05D009059 5.2e-41 173.7 733 74.9
MD04G1034700 Malus domestica HOM05D007128 ORTHO05D009059 4.4e-40 170.6 732 74.0
FvH4_4g11500 Fragaria vesca HOM05D007128 ORTHO05D009059 5.8e-40 170.2 735 74.8
ClCG08G004220 Citrullus lanatus HOM05D007128 ORTHO05D009059 2.2e-39 168.3 726 65.4
Cfa015785 Carpinus fangiana HOM05D007128 ORTHO05D009059 2.9e-39 167.9 725 75.7
Haze_00709 Corylus avellana HOM05D007128 ORTHO05D009059 2.9e-39 167.9 725 75.9
FAN17G2288 Fragaria x ananassa HOM05D007128 ORTHO05D009059 8.3e-39 166.4 741 75.3
Manes.14G160600 Manihot esculenta HOM05D007128 ORTHO05D009059 1.4e-38 165.6 728 75.7
FAN22G1219 Fragaria x ananassa HOM05D007128 ORTHO05D009059 3.2e-38 164.5 726 75.8
Duzib151G0548 Durio zibethinus HOM05D007128 ORTHO05D009059 5.4e-38 163.7 735 75.1
Eucgr.A00240 Eucalyptus grandis HOM05D007128 ORTHO05D009059 5.4e-38 163.7 735 73.1
CANSAT78G2527 Cannabis sativa HOM05D007128 ORTHO05D009059 7.8e-37 159.8 734 74.3
Medtr5g007250 Medicago truncatula HOM05D007128 ORTHO05D009059 7.8e-37 159.8 737 73.5
CiPaw.01G097300 Carya illinoinensis HOM05D007128 ORTHO05D009059 1.0e-36 159.5 733 74.2
Lalb_Chr09g0320101 Lupinus albus HOM05D007128 ORTHO05D009059 1.0e-36 159.5 733 73.4
Psat2g189360 Pisum sativum HOM05D007128 ORTHO05D009059 1.0e-36 159.5 736 73.9
arahy.Tifrunner.gnm1.ann1.IE5CWM Arachis hypogaea HOM05D007128 ORTHO05D009059 2.3e-36 158.3 737 73.0
QL10p046158 Quercus lobata HOM05D007128 ORTHO05D009059 2.3e-36 158.3 726 75.6
arahy.Tifrunner.gnm1.ann1.Q2Q9DA Arachis hypogaea HOM05D007128 ORTHO05D009059 3.0e-36 157.9 737 72.7
Cc03_g13390 Coffea canephora HOM05D007128 ORTHO05D009059 3.0e-36 157.9 730 74.9
Prupe.1G186300 Prunus persica HOM05D007128 ORTHO05D009059 3.9e-36 157.5 729 74.2
SalBow6G5229 Salvia bowleyana HOM05D007128 ORTHO05D009059 5.1e-36 157.1 725 69.8
TPR.G18647 Trifolium pratense HOM05D007128 ORTHO05D009059 8.6e-36 156.4 736 71.7
Gohir.A02G014300 Gossypium hirsutum HOM05D007128 ORTHO05D009059 1.5e-35 155.6 729 64.9
Ca_24431_v3 Cicer arietinum L. HOM05D007128 ORTHO05D009059 3.3e-35 154.5 727 75.0
Phvul.002G041300 Phaseolus vulgaris HOM05D007128 ORTHO05D009059 7.3e-35 153.3 736 71.7
VMungo1309G2539 Vigna mungo HOM05D007128 ORTHO05D009059 7.3e-35 153.3 734 72.2
TWI38G2031 Tripterygium wilfordii HOM05D007128 ORTHO05D009059 3.6e-34 151.0 735 65.3
Sc16g0009730 Simmondsia chinensis HOM05D007128 ORTHO05D009059 8.1e-34 149.8 735 72.1
LjContig00222g0017157 Lotus japonicus HOM05D007128 ORTHO05D009059 3.1e-33 147.9 733 73.9
DCAR_005541 Daucus carota HOM05D007128 ORTHO05D009059 3.4e-32 144.4 724 60.8
SGA_v2.0_scaffold31G12566 Striga asiatica HOM05D007128 ORTHO05D009059 1.1e-30 139.4 698 71.5
Migut.N00468 Erythranthe guttata HOM05D007128 ORTHO05D009059 1.4e-30 139.0 740 69.5
CsaV3_6G003710 Cucumis sativus L. HOM05D007128 ORTHO05D009059 2.4e-30 138.3 733 73.8
Glyma.11G009000 Glycine max HOM05D007128 ORTHO05D009059 5.4e-30 137.1 734 73.0
CAN.G1681.10 Capsicum annuum HOM05D007128 ORTHO05D009059 7.1e-30 136.7 725 70.1
Oeu061587.1 Olea europaea HOM05D007128 ORTHO05D009059 7.1e-30 136.7 725 72.8
Dinv22679 Davidia involucrata HOM05D007128 ORTHO05D009059 1.6e-29 135.6 149 48.3
Thecc.04G183700 Theobroma cacao HOM05D007128 ORTHO05D009059 2.7e-29 134.8 156 45.5
Sed0021713 Sechium edule HOM05D007128 ORTHO05D009059 3.5e-29 134.4 733 73.4
PGSC0003DMG400016718 Solanum tuberosum HOM05D007128 ORTHO05D009059 7.8e-29 133.3 725 69.7
Rhsim02G0073500 Rhododendron simsii HOM05D007128 ORTHO05D009059 3.0e-28 131.3 203 47.3
CSS0003119 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 3.9e-28 131.0 147 48.3
Rhsim02G0072100 Rhododendron simsii HOM05D007128 ORTHO05D009059 3.9e-28 131.0 206 61.2
Sopen02g025900 Solanum pennellii HOM05D007128 ORTHO05D009059 3.9e-28 131.0 725 69.7
CSS0046383 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 5.1e-28 130.6 147 48.3
MELO3C011605.2 Cucumis melo HOM05D007128 ORTHO05D009059 5.1e-28 130.6 725 74.5
Solyc02g081250.3 Solanum lycopersicum HOM05D000189 ORTHO05D009059 1.9e-27 128.6 725 69.5
Gohir.D02G016000 Gossypium hirsutum HOM05D007128 ORTHO05D009059 2.5e-27 128.3 158 43.7
Gorai.005G019500 Gossypium raimondii HOM05D007128 ORTHO05D009059 2.5e-27 128.3 158 43.7
Gohir.A02G014400 Gossypium hirsutum HOM05D007128 ORTHO05D009059 3.3e-27 127.9 159 44.0
QL10p044765 Quercus lobata HOM05D007128 ORTHO05D009059 3.3e-27 127.9 206 38.8
CDE07G1249 Ceratophyllum demersum HOM05D007128 ORTHO05D009059 2.8e-26 124.8 712 69.5
ECA248G2224 Erigeron canadensis HOM05D007128 ORTHO05D009059 4.7e-26 124.0 153 42.5
Cpa.g.sc71.41 Carica papaya HOM05D007128 ORTHO05D009059 6.2e-26 123.6 146 48.6
EL10Ac4g09187 Beta vulgaris HOM05D007128 ORTHO05D009059 3.1e-25 121.3 153 43.1
Hund13263 Selenicereus undatus HOM05D007128 ORTHO05D000105 6.8e-25 120.2 154 42.2
Actinidia11313 Actinidia chinensis HOM05D007128 ORTHO05D009059 1.2e-24 119.4 159 44.0
AL1G16720 Arabidopsis lyrata HOM05D007128 ORTHO05D009059 4.4e-24 117.5 739 72.8
AUR62000973 Chenopodium quinoa HOM05D007128 ORTHO05D009059 2.2e-23 115.2 206 66.0
MSTRG.26768 Avicennia marina HOM05D007128 ORTHO05D009059 3.8e-23 114.4 206 59.7
Glyma.01G233900 Glycine max HOM05D007128 ORTHO05D009059 3.8e-23 114.4 384 64.3
CARHR006390 Cardamine hirsuta HOM05D007128 ORTHO05D009059 2.4e-22 111.7 206 70.9
Gorai.005G019400 Gossypium raimondii HOM05D007128 ORTHO05D009059 3.2e-22 111.3 144 41.0
COL.COLO4_24378 Corchorus olitorius HOM05D007128 ORTHO05D009059 4.2e-22 110.9 132 46.2
QL10p046885 Quercus lobata HOM05D007128 ORTHO05D009059 4.2e-22 110.9 149 42.3
Eucgr.L00553 Eucalyptus grandis HOM05D007128 ORTHO05D009059 5.4e-22 110.5 157 38.9
QL10p045737 Quercus lobata HOM05D007128 ORTHO05D009059 9.2e-22 109.8 151 42.4
AUR62004993 Chenopodium quinoa HOM05D007128 ORTHO05D009059 2.1e-21 108.6 149 45.0
Lsat_1_v5_gn_1_71561 Lactuca sativa HOM05D007128 ORTHO05D009059 7.8e-21 106.7 654 77.2
ATR0743G184 Amborella trichopoda HOM05D007128 ORTHO05D009059 2.3e-20 105.1 206 65.0
QL10p045743 Quercus lobata HOM05D007128 ORTHO05D009059 2.3e-20 105.1 82 62.2
THA.LOC104826248 Tarenaya hassleriana HOM05D007128 ORTHO05D009059 2.3e-20 105.1 206 68.0
Aa31LG1G7750 Aethionema arabicum HOM05D007128 ORTHO05D009059 3.9e-20 104.4 206 68.4
SHI23551 Sapria himalayana HOM05D007128 ORTHO05D009059 3.9e-20 104.4 148 43.2
Carub.0001s0604 Capsella rubella HOM05D007128 ORTHO05D009059 5.1e-20 104.0 156 39.1
HanXRQChr16g0502661 Helianthus annuus HOM05D007128 ORTHO05D009059 8.7e-20 103.2 206 53.9
AT1G06710 Arabidopsis thaliana HOM05D007128 ORTHO05D009059 3.3e-19 101.3 206 68.9
Lj6C61T6 Lonicera japonica HOM05D007128 ORTHO05D009059 3.3e-19 101.3 739 36.5
Thhalv10006683m.g Eutrema salsugineum HOM05D007128 ORTHO05D009059 5.6e-19 100.5 206 68.4
A10p05290 Brassica napus HOM05D007128 ORTHO05D009059 1.6e-18 99.0 206 66.0
BraA10t42794Z Brassica rapa HOM05D007128 ORTHO05D009059 1.6e-18 99.0 206 68.4
CSS0016083 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 2.8e-18 98.2 80 58.8
Sp1g05440 Schrenkiella parvula HOM05D007128 ORTHO05D009059 4.7e-18 97.4 206 68.4
Nitab4.5_0000286g0010 Nicotiana tabacum HOM05D007128 ORTHO05D009059 1.1e-17 96.3 142 40.1
BolC5t29261H Brassica oleracea HOM05D007128 ORTHO05D009059 1.8e-17 95.5 207 68.1
BcaNung05934 Brassica carinata HOM05D000703 ORTHO05D000633 3.1e-17 94.7 150 38.7
Gohir.D02G015950 Gossypium hirsutum HOM05D007128 ORTHO05D009059 3.1e-17 94.7 148 35.8
C05p04890 Brassica napus HOM05D007128 ORTHO05D009059 1.2e-16 92.8 207 67.6
SEGI_08126 Sequoiadendron giganteum HOM05D007128 ORTHO05D009059 4.9e-15 87.4 205 66.3


User provided reference genes

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