Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.7e-177 625.2 305 100.0
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 3.5e-84 315.8 217 67.3
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 1.5e-82 310.5 217 65.9
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 1.5e-82 310.5 217 70.0
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 1.9e-82 310.1 217 65.4
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 4.3e-82 308.9 217 61.8
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 4.3e-82 308.9 217 65.0
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 7.3e-82 308.1 221 64.7
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 1.2e-81 307.4 217 61.8
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 1.6e-81 307.0 217 64.5
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.6e-81 307.0 217 68.7
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 2.1e-81 306.6 217 61.3
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 2.1e-81 306.6 217 67.7
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 2.8e-81 306.2 217 64.1
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 3.6e-81 305.8 217 69.6
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 3.6e-81 305.8 217 63.6
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 4.7e-81 305.4 217 67.7
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 6.2e-81 305.1 217 62.7
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 8.1e-81 304.7 217 64.1
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 8.1e-81 304.7 217 64.1
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 8.1e-81 304.7 217 70.0
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 2.4e-80 303.1 217 59.9
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 6.9e-80 301.6 217 65.0
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 8.9e-80 301.2 217 60.4
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 1.2e-79 300.8 217 69.1
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 1.2e-79 300.8 219 60.3
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.5e-79 300.4 219 65.3
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 2.0e-79 300.1 217 62.7
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 3.4e-79 299.3 217 66.8
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 3.4e-79 299.3 217 58.5
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 4.4e-79 298.9 217 62.2
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 4.4e-79 298.9 217 63.1
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 7.6e-79 298.1 218 64.7
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 7.6e-79 298.1 222 59.0
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 9.9e-79 297.7 217 64.1
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 1.3e-78 297.4 217 66.8
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 1.3e-78 297.4 217 63.1
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 1.7e-78 297.0 217 60.4
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 1.7e-78 297.0 217 65.4
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 2.9e-78 296.2 217 65.9
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 4.9e-78 295.4 217 62.2
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 4.9e-78 295.4 217 60.4
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 4.9e-78 295.4 217 60.4
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 6.4e-78 295.0 215 60.9
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 8.4e-78 294.7 217 66.4
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 8.4e-78 294.7 212 64.6
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 1.1e-77 294.3 217 65.9
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 1.9e-77 293.5 219 59.4
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 1.9e-77 293.5 217 65.9
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 2.4e-77 293.1 215 61.9
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 2.4e-77 293.1 217 64.5
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 3.2e-77 292.7 217 59.4
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 4.2e-77 292.4 219 59.8
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 5.4e-77 292.0 217 64.1
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 5.4e-77 292.0 217 65.9
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 7.1e-77 291.6 217 64.1
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 9.3e-77 291.2 219 59.8
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 9.3e-77 291.2 217 65.0
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 1.2e-76 290.8 219 59.4
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.6e-76 290.4 217 58.5
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 2.1e-76 290.0 222 59.5
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 2.1e-76 290.0 222 59.5
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 2.1e-76 290.0 217 64.5
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 3.5e-76 289.3 217 59.4
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.5e-76 289.3 217 62.7
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 3.5e-76 289.3 217 65.0
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 4.6e-76 288.9 217 64.1
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 4.6e-76 288.9 217 65.0
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 6.0e-76 288.5 217 58.5
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 6.0e-76 288.5 221 58.8
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 1.0e-75 287.7 222 59.5
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 1.3e-75 287.3 217 62.7
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 1.7e-75 287.0 219 58.4
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 1.7e-75 287.0 217 64.5
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 1.7e-75 287.0 225 61.8
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 1.7e-75 287.0 217 61.3
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 3.9e-75 285.8 222 59.5
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 8.7e-75 284.6 217 59.4
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 2.5e-74 283.1 219 57.1
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 7.3e-74 281.6 217 57.1
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 1.3e-73 280.8 217 58.5
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 2.1e-73 280.0 217 62.7
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 8.1e-73 278.1 217 57.6
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 1.8e-72 276.9 280 48.2
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 4.0e-72 275.8 217 62.2
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 6.9e-72 275.0 217 60.8
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 6.9e-72 275.0 201 62.7
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.2e-71 274.2 217 59.9
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 1.7e-70 270.4 217 58.1
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 3.9e-67 259.2 200 59.0
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 8.7e-67 258.1 182 64.8
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 1.1e-66 257.7 186 67.7
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 1.1e-66 257.7 212 59.0
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 1.5e-63 247.3 203 60.6
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 2.2e-62 243.4 219 48.4
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 1.6e-60 237.3 218 47.7
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 1.1e-56 224.6 164 67.7
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.4e-56 223.4 128 85.9
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 2.9e-54 216.5 211 50.2
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 1.8e-51 207.2 211 45.5
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 8.2e-49 198.4 203 44.3
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 7.2e-45 185.3 218 49.1
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 6.7e-43 178.7 147 54.4
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.7e-38 164.1 144 48.6
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 1.0e-35 154.8 320 30.6
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.4e-35 154.5 115 61.7
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 5.1e-35 152.5 108 63.9
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 2.8e-33 146.7 214 33.6
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 2.8e-33 146.7 220 37.3
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 2.2e-25 120.6 159 42.8
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 9.1e-16 88.6 57 70.2
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 3.2e-13 80.1 55 60.0


User provided reference genes

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