Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007514 Vanilla planifolia HOM05D000108 ORTHO05D429080 9.9e-79 297.0 179 100.0
HPP92_005095 Vanilla planifolia HOM05D000108 ORTHO05D001724 2.4e-08 63.2 125 38.4
Aqoxy1G01143 Aquilegia oxysepala HOM05D000108 ORTHO05D001724 1.2e-07 60.8 41 63.4
CiPaw.01G268600 Carya illinoinensis HOM05D000108 ORTHO05D001724 2.0e-07 60.1 154 28.6
ClCG08G007710 Citrullus lanatus HOM05D000108 ORTHO05D001724 3.5e-07 59.3 41 58.5
MELO3C019823.2 Cucumis melo HOM05D000108 ORTHO05D001724 3.5e-07 59.3 41 58.5
CsaV3_6G036700 Cucumis sativus L. HOM05D000108 ORTHO05D001724 3.5e-07 59.3 41 58.5
Manes.05G201200 Manihot esculenta HOM05D000108 ORTHO05D001724 3.5e-07 59.3 177 27.7
Rhsim03G0115900 Rhododendron simsii HOM05D000108 ORTHO05D001724 3.5e-07 59.3 42 59.5
Sabra10G0175100 Salix brachista HOM05D000108 ORTHO05D001724 3.5e-07 59.3 41 63.4
MBI18_g01552_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D001724 4.5e-07 58.9 41 61.0
Sed0027974 Sechium edule HOM05D000108 ORTHO05D001724 5.9e-07 58.5 41 58.5
HPP92_005021 Vanilla planifolia HOM05D000042 ORTHO05D000028 5.9e-07 58.5 40 70.0
Ciclev10030573m.g Citrus clementina HOM05D000108 ORTHO05D001724 7.7e-07 58.2 41 61.0
Eucgr.J01062 Eucalyptus grandis HOM05D000108 ORTHO05D001724 7.7e-07 58.2 41 56.1
Potri.010G227000 Populus trichocarpa HOM05D000108 ORTHO05D001724 7.7e-07 58.2 41 61.0
Atru.BG.260.p Acer truncatum HOM05D000108 ORTHO05D001724 1.0e-06 57.8 41 58.5
TWI63G0200 Tripterygium wilfordii HOM05D000108 ORTHO05D001724 1.0e-06 57.8 41 58.5
FvH4_7g18790 Fragaria vesca HOM05D000108 ORTHO05D001724 1.3e-06 57.4 41 61.0
FAN01G0155 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.3e-06 57.4 41 61.0
FAN06G1146 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.3e-06 57.4 41 61.0
FAN06G2234 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.3e-06 57.4 41 61.0
FAN10G1740 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.3e-06 57.4 41 61.0
FAN10G3052 Fragaria x ananassa HOM05D000108 ORTHO05D001724 1.3e-06 57.4 41 61.0
RcHm_v2.0_Chr1g0362591 Rosa chinensis HOM05D000108 ORTHO05D001724 1.3e-06 57.4 41 61.0
Cfa001680 Carpinus fangiana HOM05D000108 ORTHO05D001724 1.7e-06 57.0 41 56.1
Dinv36392 Davidia involucrata HOM05D000108 ORTHO05D001724 2.3e-06 56.6 41 56.1
MSTRG.9150 Avicennia marina HOM05D000108 ORTHO05D001724 2.9e-06 56.2 125 30.4
FAN03G2395 Fragaria x ananassa HOM05D000108 ORTHO05D001724 2.9e-06 56.2 41 58.5
Thecc.10G083400 Theobroma cacao HOM05D000108 ORTHO05D001724 2.9e-06 56.2 42 54.8
GSVIVG01016220001 Vitis vinifera HOM05D003228 ORTHO05D001724 2.9e-06 56.2 178 27.5
Haze_16873 Corylus avellana HOM05D000108 ORTHO05D001724 3.8e-06 55.8 41 56.1
Lj2A20G42 Lonicera japonica HOM05D000108 ORTHO05D001724 3.8e-06 55.8 41 58.5
MD01G1103200 Malus domestica HOM05D000108 ORTHO05D001724 3.8e-06 55.8 38 57.9
PGR044G1521 Punica granatum HOM05D000108 ORTHO05D001724 3.8e-06 55.8 47 57.4
Aa31sc43G100 Aethionema arabicum HOM05D000108 ORTHO05D001724 5.0e-06 55.5 40 57.5
COL.COLO4_33386 Corchorus olitorius HOM05D000108 ORTHO05D001724 5.0e-06 55.5 42 52.4
Cpa.g.sc53.131 Carica papaya HOM05D000108 ORTHO05D001724 6.6e-06 55.1 41 53.7
Gohir.D10G210800 Gossypium hirsutum HOM05D000108 ORTHO05D001724 6.6e-06 55.1 41 53.7
Gorai.011G236400 Gossypium raimondii HOM05D000108 ORTHO05D001724 6.6e-06 55.1 41 53.7
Prupe.2G208800 Prunus persica HOM05D000108 ORTHO05D001724 6.6e-06 55.1 38 57.9
TAR636G0116 Trochodendron aralioides HOM05D000108 ORTHO05D001724 6.6e-06 55.1 41 53.7
AL5G35980 Arabidopsis lyrata HOM05D000108 ORTHO05D001724 8.6e-06 54.7 40 57.5
AT3G54870 Arabidopsis thaliana HOM05D000108 ORTHO05D001724 8.6e-06 54.7 40 57.5
CSS0044546 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001724 8.6e-06 54.7 41 56.1
Carub.0005s2148 Capsella rubella HOM05D000108 ORTHO05D001724 8.6e-06 54.7 40 57.5
Thhalv10010108m.g Eutrema salsugineum HOM05D000108 ORTHO05D001724 8.6e-06 54.7 40 57.5
MD07G1169900 Malus domestica HOM05D000108 ORTHO05D001724 8.6e-06 54.7 38 57.9
PSO063G0754 Papaver somniferum HOM05D000108 ORTHO05D001724 8.6e-06 54.7 41 61.0
PSO339G0808 Papaver somniferum HOM05D000108 ORTHO05D001724 8.6e-06 54.7 41 61.0
Sp5g07550 Schrenkiella parvula HOM05D000108 ORTHO05D001724 8.6e-06 54.7 40 57.5
THA.LOC104825220 Tarenaya hassleriana HOM05D000108 ORTHO05D001724 8.6e-06 54.7 40 57.5


User provided reference genes

Program Settings