Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 1.6e-128 462.6 213 100.0
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 1.2e-38 164.1 193 44.6
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.7e-29 133.7 206 35.9
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 8.6e-29 131.3 202 37.1
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.1e-28 131.0 163 45.4
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 1.5e-28 130.6 211 34.6
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 4.3e-28 129.0 207 35.3
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 4.3e-28 129.0 215 36.7
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 7.3e-28 128.3 215 37.7
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 2.1e-27 126.7 211 36.5
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.6e-27 125.9 215 36.3
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 8.0e-27 124.8 220 32.7
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 8.0e-27 124.8 219 36.1
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 8.0e-27 124.8 219 36.1
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 8.0e-27 124.8 162 42.0
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.4e-26 124.0 191 41.9
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.4e-26 124.0 212 34.9
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 3.0e-26 122.9 209 34.9
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 4.0e-26 122.5 221 32.1
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 5.2e-26 122.1 154 41.6
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 6.8e-26 121.7 164 42.1
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 6.8e-26 121.7 220 32.3
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 6.8e-26 121.7 221 32.1
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 8.9e-26 121.3 206 35.0
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.5e-25 120.6 222 34.2
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 1.5e-25 120.6 213 34.7
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 1.5e-25 120.6 160 41.9
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 2.6e-25 119.8 190 37.4
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 3.4e-25 119.4 216 37.5
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 4.4e-25 119.0 223 32.7
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 4.4e-25 119.0 218 33.9
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 4.4e-25 119.0 234 32.5
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 5.7e-25 118.6 161 39.1
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 7.5e-25 118.2 161 39.1
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.3e-24 117.5 224 33.9
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 1.3e-24 117.5 178 39.9
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 2.2e-24 116.7 182 36.3
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 2.2e-24 116.7 186 38.7
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 2.2e-24 116.7 224 34.4
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 2.9e-24 116.3 215 34.0
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 3.7e-24 115.9 172 40.7
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 3.7e-24 115.9 214 34.6
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 4.9e-24 115.5 199 36.7
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 4.9e-24 115.5 201 35.8
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 6.4e-24 115.2 223 34.5
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.1e-23 114.4 224 33.5
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 1.8e-23 113.6 220 34.1
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 4.1e-23 112.5 219 32.4
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 4.1e-23 112.5 159 39.0
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 5.4e-23 112.1 173 36.4
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 9.2e-23 111.3 175 37.7
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.9e-22 108.6 231 30.3
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 5.9e-22 108.6 162 37.0
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 2.3e-21 106.7 209 34.4
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 3.0e-21 106.3 231 29.9
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 1.9e-20 103.6 163 37.4
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 2.5e-20 103.2 125 46.4
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 3.3e-20 102.8 125 43.2
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 4.3e-20 102.4 156 39.7
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 9.5e-20 101.3 182 35.2
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.2e-19 100.9 183 32.2
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 3.6e-19 99.4 148 41.2
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 6.2e-19 98.6 119 41.2
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 1.8e-18 97.1 178 34.8
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 1.8e-18 97.1 109 44.0
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 2.6e-17 93.2 119 42.0
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 7.5e-17 91.7 115 41.7
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 1.1e-15 87.8 115 41.7
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.6e-14 84.0 127 37.0
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.7e-13 80.5 92 44.6
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.7e-13 80.5 94 43.6
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 1.1e-12 77.8 182 32.4
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.5e-09 67.4 93 37.6
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.3e-08 64.3 99 36.4
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 3.7e-08 62.8 98 35.7
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 4.1e-07 59.3 100 36.0
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 1.2e-06 57.8 99 37.4


User provided reference genes

Program Settings